prot_H-paniculata_contig6953.14891.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6953.14891.1
Unique Nameprot_H-paniculata_contig6953.14891.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length224
Homology
BLAST of mRNA_H-paniculata_contig6953.14891.1 vs. uniprot
Match: A0A6H5JWC3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWC3_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 2.270e-85
Identity = 134/218 (61.47%), Postives = 167/218 (76.61%), Query Frame = 0
Query:    1 MLFGAKWADTKALGKVPSSDYAIYERCKDETGFVPFYIRKIQHGAAKRAFTYGYLLRLNQGSTEVSAALKQTMCYQCALNGGNKILAAHFAFLAHRNGVSIDRLAQIADESSTGGGASAAEDAAMALAQACSWTPARMTPTLVGLITRLFSPPAVIELLITLSVYLALHRWTSVYVPKRYEPEIGKFVDMHGERLHMNKRPCTAEQAGWEDIAIHTRR 218
            M+FG K AD ++L K+P+SD A++ +CK + GFVP+YIR++QH  AK+A ++G+LLRL QGS EV   LKQ M YQCA N  N +L AHFAF+A R+GV++ RL Q+ D +STGGG SAAEDAAMA AQA SWTP RMT  L GLI+RLFSPPAVIELLIT+SV  A+HRWTSVYVP+RYEPEI +FV  +G  L +   PCTA+Q  WE+IA   R+
Sbjct:  279 MIFGGKMADNRSLKKIPTSDSALFSQCKKDGGFVPYYIRQMQHANAKKALSFGFLLRLCQGSDEVPVQLKQLMAYQCATNAENNVLRAHFAFMAMRSGVTLSRLIQVTDITSTGGGDSAAEDAAMAFAQAASWTPTRMTAALAGLISRLFSPPAVIELLITVSVEFAIHRWTSVYVPRRYEPEIDEFVKEYGPALGIPHSPCTADQQKWEEIAAQKRK 496          
BLAST of mRNA_H-paniculata_contig6953.14891.1 vs. uniprot
Match: D7FMN7_ECTSI (Probable fusion protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMN7_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 6.700e-61
Identity = 108/225 (48.00%), Postives = 151/225 (67.11%), Query Frame = 0
Query:    1 MLFGAKWADTKALGKVPSSDYAIYERCKDETGFVPFYIRKIQHGAAKRAFTYGYLLRLNQGSTEVSAALKQTMCYQCALNGGNKILAAHFAFLAHRNGVSIDRLAQIADESSTGGGASAAED-------AAMALAQACSWTPARMTPTLVGLITRLFSPPAVIELLITLSVYLALHRWTSVYVPKRYEPEIGKFVDMHGERLHMN-KRPCTAEQAGWEDIAIHTR 217
            M+ GAK AD  +L   P+++  + ++C +  GFVP+Y+ +++H  A+ AF + + LRL QGS EV A LKQ MCY CA N GN IL AH+AF+AHRNG+ I +LA   +  S+   A AA+D       AAMALA+ACS TP+ ++P LVGL+ R +SP  VIEL+ T+S+    HRWT++Y+P+ YEPE+ KFV  HG  L ++ +RPCT +Q+ WE IA   R
Sbjct:  195 MIIGAKLADRASLKNTPTAEQLVAQKCMELAGFVPYYLVQMKHSQARNAFVWAFTLRLCQGSEEVPAQLKQLMCYICATNAGNTILRAHYAFMAHRNGMPIRQLATATNTDSSE--AVAADDTIDAKQVAAMALAEACSGTPSTVSPVLVGLLMRQYSPAGVIELIATVSLAFMYHRWTAIYMPREYEPEVLKFVQEHGAALGIDPERPCTKDQSTWEGIAKEAR 417          
BLAST of mRNA_H-paniculata_contig6953.14891.1 vs. uniprot
Match: A0A6H5JXG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXG8_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 5.470e-36
Identity = 81/183 (44.26%), Postives = 112/183 (61.20%), Query Frame = 0
Query:    1 MLFGAKWADTKALGKVPSSDYAIYERCKDETGFVPFYI---RKIQHGAAKRAFTYGYLLRLNQGSTEVSAALKQTMCYQCALNGGNKILAAHFAFLAHRNGVSIDRLAQI-ADESSTGGGASAAEDAAMALAQACSWTPARMTPTLVGLITRLFSPPAVIELLITLSVYLALHRWTSVYVPKR 179
            ML GAK AD+ +L   P+S+  + + C +  GF P+Y+    K +   A+ A  + +  RL QGS EV AA KQTM Y  A +  N IL AHFAF+AHRNGVS+  LA   A+   T GG    + AA+++A+AC  TP  +   LV L+ R ++P  VIEL+ TLS+   L RWTS+Y+PK+
Sbjct:  217 MLVGAKMADSASLKGTPTSEKNVKQLCTERAGFAPYYLVGEEKSKMANARNALVWAFTRRLCQGSEEVPAATKQTMGYMLATSADNTILRAHFAFMAHRNGVSVSNLASATAEGGDTDGGEDLKKAAALSMARACGGTPGPLPRELVALLMRQYTPAGVIELVNTLSLVSMLQRWTSIYMPKQ 399          
BLAST of mRNA_H-paniculata_contig6953.14891.1 vs. uniprot
Match: D7G5G2_ECTSI (Probable fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G2_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 1.960e-29
Identity = 66/137 (48.18%), Postives = 91/137 (66.42%), Query Frame = 0
Query:   83 NKILAAHFAFLAHRNGVSIDRLAQI-ADESSTGGGASAAEDAAMALAQACSWTPARMTPTLVGLITRLFSPPAVIELLITLSVYLALHRWTSVYVPKRYEPEIGKFVDMHGERLHMNK-RPCTAEQAGWEDIAIHTR 217
            N IL AHFAF+AHRNGVS+  LA   A+   T GG    + AA+++A+ACS T   M   LV L+ R ++P  VIEL+ TLS+   L RWTS+Y+PK+YEPE+  FV+ +G  L ++  +PCT EQ+GW ++A   R
Sbjct:  108 NTILRAHFAFMAHRNGVSVSDLANATAEGGDTDGGEDLKKAAALSMARACSGTLGPMPRELVALLMRQYTPAGVIELVNTLSLVSMLQRWTSIYMPKQYEPEVLVFVEENGSALSLDPTKPCTEEQSGWRELAAEIR 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6953.14891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JWC3_9PHAE2.270e-8561.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FMN7_ECTSI6.700e-6148.00Probable fusion protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JXG8_9PHAE5.470e-3644.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5G2_ECTSI1.960e-2948.18Probable fusion protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029032AhpD-likeGENE3D1.20.1290.10coord: 19..180
e-value: 1.0E-9
score: 40.5
IPR029032AhpD-likeSUPERFAMILY69118AhpD-likecoord: 13..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6953contigH-paniculata_contig6953:4183..7086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6953.14891.1mRNA_H-paniculata_contig6953.14891.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6953 745..7723 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6953.14891.1 ID=prot_H-paniculata_contig6953.14891.1|Name=mRNA_H-paniculata_contig6953.14891.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=224bp
MLFGAKWADTKALGKVPSSDYAIYERCKDETGFVPFYIRKIQHGAAKRAF
TYGYLLRLNQGSTEVSAALKQTMCYQCALNGGNKILAAHFAFLAHRNGVS
IDRLAQIADESSTGGGASAAEDAAMALAQACSWTPARMTPTLVGLITRLF
SPPAVIELLITLSVYLALHRWTSVYVPKRYEPEIGKFVDMHGERLHMNKR
PCTAEQAGWEDIAIHTRRGVIHE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029032AhpD-like