prot_H-paniculata_contig691.14839.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig691.14839.1
Unique Name	prot_H-paniculata_contig691.14839.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	300

Homology

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BLAST of mRNA_H-paniculata_contig691.14839.1 vs. uniprot
Match: D7FKU3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU3_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 3.370e-44
Identity = 113/283 (39.93%), Postives = 141/283 (49.82%), Query Frame = 0

Query:    5 HVRQREERPVYGITRLFVLVSSRCLFPCLRRVPRFTKRRAAQLLAVIWLCWVVVACTEWRAQHNQHNVRKQLIEFLQETHLYVVEEGHIWEGFQSPMQRVPTDLGRSSPSNVGERKSFAYQEVVEVESGVRKKRSADHHLFVKAVGGPIDGVKRLRQQEIRERESFALVDGEGGSRLEPPENNGNVRTAKAKADS---KYNIKAASHLEGHNAGDLDEAHQKIVCPLIYTADANTAKEHGLHLFQEELDLLATVTARFCRCLCLLPADGDDPDRPQVCNITIF 284
            H    EE  V+ I     +++ RC FP  RR+PR TKRR  Q+L ++WLCW+V AC EWRAQHN    RKQL+ FLQET  YVVEEG + E +QSP+QR  T      P   GE +        E +S  ++  S    + V    G I G          + E        GGS+          R  + +AD    +  ++     EGH +           CPLIYT DA TAK+HGL LFQEEL+LL TVTAR CRCLC  P      D PQ    T F
Sbjct:   39 HDHPAEELSVHRIQ----VLARRCAFPFARRIPRVTKRRTGQVLLILWLCWIVAACIEWRAQHNLRRSRKQLVAFLQETTFYVVEEGRLSESWQSPLQRRLTLHVDGEPVVGGEARHG------EEDSDRQRHSSNSSPVGVDRDLGRIRG--GFSSAGYGDSEEMPSGGFSGGSQAS--------RQHRERADEWLRQRRLRPQGSAEGHES-----------CPLIYTVDAKTAKKHGLLLFQEELELLGTVTARLCRCLCHSPVVHTQ-DHPQGQRRTAF 289

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig691.14839.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig691.14839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FKU3_ECTSI	3.370e-44	39.93	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 34..44
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 14..33
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 45..65
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..13
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 66..299

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig691	contig	H-paniculata_contig691:665..2808 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig691.14839.1	mRNA_H-paniculata_contig691.14839.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig691 173..9283 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig691.14839.1 ID=prot_H-paniculata_contig691.14839.1|Name=mRNA_H-paniculata_contig691.14839.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=300bp
MDLGHVRQREERPVYGITRLFVLVSSRCLFPCLRRVPRFTKRRAAQLLAV
IWLCWVVVACTEWRAQHNQHNVRKQLIEFLQETHLYVVEEGHIWEGFQSP
MQRVPTDLGRSSPSNVGERKSFAYQEVVEVESGVRKKRSADHHLFVKAVG
GPIDGVKRLRQQEIRERESFALVDGEGGSRLEPPENNGNVRTAKAKADSK
YNIKAASHLEGHNAGDLDEAHQKIVCPLIYTADANTAKEHGLHLFQEELD
LLATVTARFCRCLCLLPADGDDPDRPQVCNITIFYKFLKRLLNPGLLIF*