prot_H-paniculata_contig690.14827.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig690.14827.1
Unique Nameprot_H-paniculata_contig690.14827.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length219
Homology
BLAST of mRNA_H-paniculata_contig690.14827.1 vs. uniprot
Match: D7FJN4_ECTSI (VPS9 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN4_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 2.120e-101
Identity = 156/196 (79.59%), Postives = 175/196 (89.29%), Query Frame = 0
Query:    1 MSGPTQRLPFLTAAEEASLRPGPSGRVGGVATAGDFFTLFLRNASEFAAEYHDSLGDRAYKEWPWEEDGQKQYEGSLRKVQFVSPVRNAPELSNETRVDEEQRWICRGHAHATLEVRRKLPDLRDGDRFVVVVRWVMTFDGFGCNLRVYCGTLFFKSSAYAKEIREGCVRGYAQSAKRWLLQAEKYSKNHSAVHLR 196
            MSGPTQRLPFLTAAEEA LRPGPSGRV GVATAGDFFTLFLR+ASEF+ +YH ++GDR  +EWPWEEDGQ+QYEGSLRKV F+SPVRNAPELSNETRV+EEQRW+ RGHA ATLE+RR+LP+LRDG RFVV VRWVM +DGFGC+L V+CGTLF+K S+YAKEIREGCVRGYA S KRW +QAEKY K H AV LR
Sbjct:    1 MSGPTQRLPFLTAAEEACLRPGPSGRVLGVATAGDFFTLFLRDASEFSGQYHTTMGDRGLEEWPWEEDGQRQYEGSLRKVHFMSPVRNAPELSNETRVEEEQRWVSRGHAQATLEIRRRLPELRDGRRFVVAVRWVMKYDGFGCSLAVFCGTLFYKPSSYAKEIREGCVRGYALSVKRWFVQAEKYVKAHGAVQLR 196          
BLAST of mRNA_H-paniculata_contig690.14827.1 vs. uniprot
Match: A0A6H5KV84_9PHAE (VPS9 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV84_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 4.350e-70
Identity = 110/142 (77.46%), Postives = 125/142 (88.03%), Query Frame = 0
Query:   55 LGDRAYKEWPWEEDGQKQYEGSLRKVQFVSPVRNAPELSNETRVDEEQRWICRGHAHATLEVRRKLPDLRDGDRFVVVVRWVMTFDGFGCNLRVYCGTLFFKSSAYAKEIREGCVRGYAQSAKRWLLQAEKYSKNHSAVHLR 196
            +GDR  +EWPWEEDGQ+QYEGSLRKV F+SPVRNAPELSNETRV+EEQRW+ RGHA ATLE+RR+LP+LRDG RFVV VRWVM +DGFGC+L V+CGTLF+K S+YAKEIREGCVRGYA S KRW +QAEKY K H AV LR
Sbjct:    1 MGDRGLEEWPWEEDGQRQYEGSLRKVHFMSPVRNAPELSNETRVEEEQRWVSRGHAQATLEIRRRLPELRDGRRFVVAVRWVMKYDGFGCSLAVFCGTLFYKPSSYAKEIREGCVRGYALSVKRWFVQAEKYVKAHGAVQLR 142          
BLAST of mRNA_H-paniculata_contig690.14827.1 vs. uniprot
Match: A0A835YQM7_9STRA (VPS9 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQM7_9STRA)

HSP 1 Score: 162 bits (409), Expect = 3.760e-42
Identity = 96/224 (42.86%), Postives = 127/224 (56.70%), Query Frame = 0
Query:    1 MSGPTQRLPFLTAAEEASLRPGPSGRVGGVATAGDFFTLFLRNASEFAAEYHDSLGDRAYKEWPWEEDGQKQYEGSLRKVQFVSPVRNAPELSNE--------TRVDEEQR-----WICRGHAH----------ATLEVRRKLPDLRDGDRFVVVVRWVMTFDGFGCNLRVYCGTLFFKSSAYAKEIREGCVRGYAQSAKRWLLQAEKYSKNHSAVHLRPKVLD 201
            MSGPTQ LPFL A+EEA LR     RV GV +  +F+TL L ++SEFA   H  LGDR  +E PW+EDG +QY G +R+V F S VR AP  S+E        TRV+EEQ             H          ATLEVRR L DL DGD+F V+ +W ++FDGFG  +R++CG  F   S  A  +  GCV+GY  + ++W   AE++++       R +  D
Sbjct:    1 MSGPTQFLPFLCASEEACLRDVGCARVRGVTSPSEFYTLLLASSSEFAGAVHRGLGDRDVREEPWQEDGYQQYAGLVRRVHFKSAVRGAP-TSDEGADDRRSFTRVEEEQTTAGAXXXXXXXXHFTAKPNRLGGATLEVRRALRDLVDGDKFRVIAKWAVSFDGFGTTVRLHCGVHFRAPSDLAAALSVGCVKGYTHTFEKWCRLAERFARRVEPGQRRREDAD 223          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig690.14827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJN4_ECTSI2.120e-10179.59VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KV84_9PHAE4.350e-7077.46VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YQM7_9STRA3.760e-4242.86VPS9 domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031968VASt domainPFAMPF16016VAStcoord: 32..169
e-value: 1.1E-11
score: 45.4
IPR031968VASt domainPROSITEPS51778VASTcoord: 20..191
score: 11.905
NoneNo IPR availablePANTHERPTHR47666FAMILY NOT NAMEDcoord: 35..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig690contigH-paniculata_contig690:22525..30896 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig690.14827.1mRNA_H-paniculata_contig690.14827.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig690 22474..30896 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig690.14827.1 ID=prot_H-paniculata_contig690.14827.1|Name=mRNA_H-paniculata_contig690.14827.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
MSGPTQRLPFLTAAEEASLRPGPSGRVGGVATAGDFFTLFLRNASEFAAE
YHDSLGDRAYKEWPWEEDGQKQYEGSLRKVQFVSPVRNAPELSNETRVDE
EQRWICRGHAHATLEVRRKLPDLRDGDRFVVVVRWVMTFDGFGCNLRVYC
GTLFFKSSAYAKEIREGCVRGYAQSAKRWLLQAEKYSKNHSAVHLRPKVL
DSDDAGEAGARGAVGEGKN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031968VASt