prot_H-paniculata_contig6889.14811.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6889.14811.1
Unique Nameprot_H-paniculata_contig6889.14811.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length536
Homology
BLAST of mRNA_H-paniculata_contig6889.14811.1 vs. uniprot
Match: D7FJS5_ECTSI (Glycosyltransferase, family GT4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS5_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 4.170e-88
Identity = 196/468 (41.88%), Postives = 249/468 (53.21%), Query Frame = 0
Query:   51 IISPLNDTVLATGSIVVSIETHGFIPSPETPIEVRVPQNGHQPALLEEGNQITLEAQEPCTLLLTLDAVVNGQSLSTSVLLSIVLDTSEVLKRRSPLPHDAVWGVPVIPKTQSTELRKLGGSTEREVASRTPHNDHRQVIDPAKRTADTSSSTLRKQHVGSEGSRYNVAVLPPNWACSKDIRRERRQTAETKVSPACDAKHQAEGIAGEGPRFTAAQVRQKPLSLLFVGSLAFDGQKSIWLQQMERLPRQRFSPTYLTFQEDD-----RAGELATRVAHSGGIFERRLRRTGVPLVAVPAPRLEVNFNEIERLRGKRDSGEIHLQGLQSPNIQEGAFSAILESFDNAKGDPSLMSPTWTRDIFLFIGQAVTEVSPNVLIMGNAKTLGDAVLTKAARWAMGPNG--RVVMDFPNIDPAPGIAADVLAAPSHYVAQHFTTEALAAAAGAHVVVIPPGVSIDERTSSTSKF 511
            I  PLNDT+L  G I ++ ETHGF P+ ETPIEV +PQNG  P LLE+GN + L +  PCT  +TL A V G+ +S SVL S VL    +L  R+PLP  A WG P                              R ++ P           L ++H   EG  YN A LP     +             K    C +          G   T    R  P+SL+FVGSL+ DGQK +WLQQ+E+  R RF+P +LTF+E +      AG   +  A S   F++RL R GVPLV V  P  +VN + I    G    G++      +  ++E AF A+LES   A G+P LMSP WT +IF  I  AV   SP+VL++ N KTLGD +LTKAARWAM  N   ++VMDFPNI PA G+  DV+A PSHYVA+H  T+ALAAAAGA VVVIPPGV +    S     
Sbjct:  110 ITRPLNDTILPLGDIFLTFETHGFTPAVETPIEVLMPQNGDTPFLLEKGNSMILSSDMPCTQQVTLYATVRGERVSASVLFSTVLGREAILSARTPLPSGAAWGRP------------------------------RLMVCPP----------LVREH--EEG--YNSASLPKGDTSTWQTHEGGTGVMVGKGGVYCSSGSAESQGCDSGEETTEGLPR--PISLVFVGSLSLDGQKHVWLQQLEQFSRVRFAPKFLTFEEQEGRNGSTAGAWKSNAAES---FKQRLSRAGVPLVTVRLP--QVNSSWIHDSIG----GQV----APTHTLKEMAFKAVLESIHRAGGNPHLMSPPWTGEIFQHIADAVESASPDVLVIANGKTLGDDLLTKAARWAMRDNSGFKIVMDFPNIGPALGVDVDVIATPSHYVARHRDTKALAAAAGAEVVVIPPGVPVAPTLSQAKNL 518          
BLAST of mRNA_H-paniculata_contig6889.14811.1 vs. uniprot
Match: A0A6H5K6W1_9PHAE (GT4 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W1_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 1.050e-87
Identity = 207/500 (41.40%), Postives = 266/500 (53.20%), Query Frame = 0
Query:   49 IRIISPLNDTVLATGSIVVSIETHGFIPSPETPIE-------------VRVPQNGHQPALLEEGNQITLEAQEPCTLLLTLDAVVNGQSLSTSVLLSIVLDTSEVLKRRSPLPHDAVWGVP---VIPKTQSTELRKLGGSTEREVASRTPHNDHRQVIDPAKRTADTSSSTLRKQHVGSEGSRYNVAVLPPNWACSKDIRRERRQTAETKVSPACDAKHQA-EGIAGEGPRFTAAQVRQKPLSLLFVGSLAFDGQKSIWLQQMERLPRQRFSPTYLTFQEDD-----RAGELATRVAHSGGIFERRLRRTGVPLVAVPAPRLEVNFNEIERLRGKRDSGEIHLQGLQSPNIQEGAFSAILESFDNAKGDPSLMSPTWTRDIFLFIGQAVTEVSPNVLIMGNAKTLGDAVLTKAARWAMGPNG--RVVMDFPNIDPAPGIAADVLAAPSHYVAQHFTTEALAAAAGAHVVVIPPGVSIDERTSSTSKFGLVGNDDILGGGR 524
            I I  PLNDT+L  G + ++ ETHGF P+ ETPIE             V   QNG  P LLE+GN I L +  PCT  +TL A V G+ +S SVL S VL    +L  R+PLP   VWG P   V P        K G     ++ +  P  D                ST +    G++     V V      CS      +R          CD+  +A EG+    PR         P+SL++VGSL+ DGQK IWLQQ+E+LPR RF+  +LTF+E +      AG   T  A S   F++RL R GVPLV V  P  +VN + I    G++           +  ++E AF  +LESF  A G+P +MSP WT +IF  I  AV   SP+VL+M N KTLGD VLTKAARWAM  N   ++VMDFPNI P+ G+  DV+A PSHYVA+H  T+ALAAAAGA VVVIPPGV +    S  S+   +  D++L  GR
Sbjct:   88 IWITRPLNDTILPLGDVFLTFETHGFTPAVETPIEASMSRGATFRFSSVLTSQNGDTPFLLEKGNSIILSSDIPCTQQVTLYATVRGERVSASVLFSTVLGREAILSARTPLPSGVVWGRPRSMVCPPL--IREHKKG-----DIFASLPKGD---------------KSTWQTHEGGTD-----VMVGKGGLCCSSGSAESQR----------CDSGEEAIEGL----PR---------PISLVYVGSLSLDGQKHIWLQQLEQLPRVRFAAKFLTFEEQEGTRGSTAGAWKTNAAES---FKQRLSRAGVPLVTVRLP--QVNSSWIHDTIGRQ---------APTNTLKEMAFRTVLESFHRAGGNPHVMSPQWTGEIFQHIADAVQSASPDVLVMANGKTLGDDVLTKAARWAMRDNSGFKIVMDFPNIGPSLGVDVDVIATPSHYVARHPDTQALAAAAGAEVVVIPPGVPV---ASPLSQAKTLLADELLSPGR 520          
BLAST of mRNA_H-paniculata_contig6889.14811.1 vs. uniprot
Match: A0A8J2S8Z6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8Z6_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.640e-16
Identity = 74/233 (31.76%), Postives = 119/233 (51.07%), Query Frame = 0
Query:  273 LSLLFVGSLAFDGQKSIWLQQMERLPRQRFSPTYLTFQEDDRAGELATRVAHSGGIFERRLRRTGVPLVAVPAPRLEVNFNEIERLRGKRDSGEI--HLQGLQSPNIQEGAFSAILESFDNAKGDPSLMSPTWTRDIFLFIGQAVTEVSPNVLIMGNAKTLGDAVLTKAARWAMGPNGRVVMDFPNIDPAPGIAADVLAAPSHYVAQHFTTE----ALAAAAGAHVVVIPPGV 499
            +++L VGS+ +DGQK+I++QQ+  + R RF+ TY +F  D+   + AT          R L   GV  V  P P +  +    E      D G +   L G  S    +G  + +LE+   +   P   SP + R  +L + + +  + P+VL+  NA+   D +L +AAR A+ P+ ++VM+ PN+ P      D++ APSHY A HF+ +    +L      HV V+ PGV
Sbjct:  269 VNILIVGSMKYDGQKNIYVQQLTHMDRTRFNFTYASFMGDE---DRATFTK-----LPRILTELGVEPVWRPIPPISGD----EASTSHPDLGALVDRLDGKNS----DGLNNYLLEALALSNNVPENTSPPFVRRTWLHLVENLRHLRPDVLVFANARDPSDLILCRAARLAV-PSAKLVMELPNLWPQLW-DLDLIVAPSHYAALHFSVQDAVHSLPVDRRPHVAVVTPGV 483          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6889.14811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJS5_ECTSI4.170e-8841.88Glycosyltransferase, family GT4 n=1 Tax=Ectocarpus... [more]
A0A6H5K6W1_9PHAE1.050e-8741.40GT4 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A8J2S8Z6_9STRA1.640e-1631.76Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..536
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.865

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6889contigH-paniculata_contig6889:3649..6396 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6889.14811.1mRNA_H-paniculata_contig6889.14811.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6889 3649..6697 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6889.14811.1 ID=prot_H-paniculata_contig6889.14811.1|Name=mRNA_H-paniculata_contig6889.14811.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=536bp
MRCALKALIWLLFAMPVELIQETGGATRSSPFFSPQDGGSKDTGQDHFIR
IISPLNDTVLATGSIVVSIETHGFIPSPETPIEVRVPQNGHQPALLEEGN
QITLEAQEPCTLLLTLDAVVNGQSLSTSVLLSIVLDTSEVLKRRSPLPHD
AVWGVPVIPKTQSTELRKLGGSTEREVASRTPHNDHRQVIDPAKRTADTS
SSTLRKQHVGSEGSRYNVAVLPPNWACSKDIRRERRQTAETKVSPACDAK
HQAEGIAGEGPRFTAAQVRQKPLSLLFVGSLAFDGQKSIWLQQMERLPRQ
RFSPTYLTFQEDDRAGELATRVAHSGGIFERRLRRTGVPLVAVPAPRLEV
NFNEIERLRGKRDSGEIHLQGLQSPNIQEGAFSAILESFDNAKGDPSLMS
PTWTRDIFLFIGQAVTEVSPNVLIMGNAKTLGDAVLTKAARWAMGPNGRV
VMDFPNIDPAPGIAADVLAAPSHYVAQHFTTEALAAAAGAHVVVIPPGVS
IDERTSSTSKFGLVGNDDILGGGRGVWCHPACESGD
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