prot_H-paniculata_contig6886.14809.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6886.14809.1 vs. uniprot
Match: D8LMR8_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR8_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 2.330e-18 Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = 0
Query: 1 MKSVAVLAMFCAGSARAFIPSPIVQGAFSAKAAPAHAASTSSTVMMAKSTALPFMDSPPALDGSAVGDFGFDPLGLTENINIPYGSRGAQAR 92
MKS AV A +CAG A AF P P V AK+APA ++++T + AKS ALPF++SP LDGS +GDFGFDPLGLTENI+IP+ +R A+ +
Sbjct: 1 MKSFAVFAAWCAGGALAFAPVPKVSS-LGAKSAPAR--NSAATALDAKSKALPFLESPATLDGSMIGDFGFDPLGLTENIDIPF-ARAAEIK 88
BLAST of mRNA_H-paniculata_contig6886.14809.1 vs. uniprot
Match: A0A7S2UB14_9STRA (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S2UB14_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 3.430e-10 Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 0
Query: 27 AFSAKAAPAHAASTSSTVMMAKSTALPFMDSPPALDGSAVGDFGFDPLGLTENINIPYGSRGAQAR 92
AF+ KA A +S+ VMMAKS A+PF+++P LDGS VGD GFDPL L+ENIN+ Y SR A+ +
Sbjct: 25 AFAGKALTTRRARSSNVVMMAKSAAIPFLEAPDKLDGSMVGDQGFDPLYLSENINLEY-SRAAELK 89
BLAST of mRNA_H-paniculata_contig6886.14809.1 vs. uniprot
Match: A0A2V3J3F8_9FLOR (Chlorophyll a-b binding protein 7, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3F8_9FLOR) HSP 1 Score: 58.5 bits (140), Expect = 1.860e-7 Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0
Query: 18 FIPSPIVQGAFSAKAAPAHAASTSSTVMMAKSTALPFMDSPPALDGSAVGDFGFDPLGLTENINIPYGSRG 88
F+P+ V+ AF+ AAP + STV M S A+PF+D+PP LDG+ VGD GFDPL L+ IN+ Y G
Sbjct: 8 FVPAG-VRTAFAGAAAPR--VQSRSTVTMVASKAIPFLDAPPKLDGTLVGDVGFDPLYLSNYINLDYARAG 75
BLAST of mRNA_H-paniculata_contig6886.14809.1 vs. uniprot
Match: A0A5J4YN76_PORPP (Chlorophyll a-b binding protein 1B-21, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YN76_PORPP) HSP 1 Score: 56.2 bits (134), Expect = 1.690e-6 Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 0
Query: 45 MMAKSTALPFMDSPPALDGSAVGDFGFDPLGLTENINIPYGSRGAQARPHCSAC 98
MMAKS ++PFM++P ALDGS VGD GFDPLG + I++ + R A+ + HC C
Sbjct: 38 MMAKSKSVPFMEAPAALDGSMVGDVGFDPLGFSNYIDLKF-LREAELK-HCRIC 89
BLAST of mRNA_H-paniculata_contig6886.14809.1 vs. uniprot
Match: A0A5J4ZAY0_PORPP (Chlorophyll a-b binding protein 1B-21, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZAY0_PORPP) HSP 1 Score: 55.5 bits (132), Expect = 2.930e-6 Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0
Query: 46 MAKSTALPFMDSPPALDGSAVGDFGFDPLGLTENINIPYGSRGAQARPHCSACRC---GFPAHAV-RTPSGSSVPR 117
M S ++PFM++PPALDGS VGD GFDPLG T ++ + R A+ + HC C GF + R P S P+
Sbjct: 32 MVTSKSMPFMEAPPALDGSMVGDVGFDPLGFTRTFDVKW-MREAELK-HCRICMLAVLGFVVQEIFRLPMYSGAPK 105
BLAST of mRNA_H-paniculata_contig6886.14809.1 vs. uniprot
Match: A0A5J4YYC4_PORPP (Chlorophyll a-b binding protein, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYC4_PORPP) HSP 1 Score: 55.1 bits (131), Expect = 4.250e-6 Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query: 45 MMAKSTALPFMDSPPALDGSAVGDFGFDPLGLTENINIPY 84
MMAKS ++PFMD+PPALDGS GD GFDPL ++ +NI +
Sbjct: 34 MMAKSKSVPFMDAPPALDGSLAGDVGFDPLNISGFLNIKW 73
BLAST of mRNA_H-paniculata_contig6886.14809.1 vs. uniprot
Match: A0A7S0BCB3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BCB3_9RHOD) HSP 1 Score: 54.3 bits (129), Expect = 7.200e-6 Identity = 28/57 (49.12%), Postives = 38/57 (66.67%), Query Frame = 0
Query: 28 FSAKAAPAHAASTSSTVMMAKSTALPFMDSPPALDGSAVGDFGFDPLGLTENINIPY 84
F+ +A A +S TVMMA S ++PF++ P LDG GD GFDPL L++NIN+ Y
Sbjct: 14 FAGQAVSVRRARSSGTVMMAMSKSIPFLECPKNLDGRLPGDVGFDPLYLSDNINLQY 70
BLAST of mRNA_H-paniculata_contig6886.14809.1 vs. uniprot
Match: A0A1X6P5L2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5L2_PORUM) HSP 1 Score: 54.3 bits (129), Expect = 8.070e-6 Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query: 46 MAKSTALPFMDSPPALDGSAVGDFGFDPLGLTENINIPYGSRGAQARPHC 95
M KS A+PFM++PPALDGS +GD GFDP G T I++ + R A+ + HC
Sbjct: 37 MVKSKAIPFMEAPPALDGSMIGDVGFDPFGFTNYIDLKF-LREAEIK-HC 84
BLAST of mRNA_H-paniculata_contig6886.14809.1 vs. uniprot
Match: J9V789_NEOYE (Light-harvesting protein n=1 Tax=Neopyropia yezoensis TaxID=2788 RepID=J9V789_NEOYE) HSP 1 Score: 54.3 bits (129), Expect = 8.230e-6 Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query: 46 MAKSTALPFMDSPPALDGSAVGDFGFDPLGLTENINIPYGSRGAQARPHC 95
M KS A+PFM++PPALDGS +GD GFDPLG + I++ + R A+ + HC
Sbjct: 38 MVKSKAIPFMEAPPALDGSMIGDVGFDPLGFSNYIDLKF-LREAEIK-HC 85
BLAST of mRNA_H-paniculata_contig6886.14809.1 vs. uniprot
Match: A0A7S2ZRV9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZRV9_9RHOD) HSP 1 Score: 52.4 bits (124), Expect = 1.040e-5 Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = 0
Query: 18 FIPSPIVQGAFS-AKAAPAHAASTSSTVMMAKSTALPFMDSPPALDGSAVGDFGFDPLGLTENINIPYGSRGAQARPHCSAC 98
F PS + + F+ A+ + A S + M AKS ++PFMD P ALDGS VGD GFDPL + + + + R A+ + HC C
Sbjct: 8 FAPSRLTRTTFAGARLSGAPVRSAARVTMQAKSKSVPFMDCPKALDGSMVGDVGFDPLNFSAYLPLSW-LREAEIK-HCRLC 87 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6886.14809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig6886.14809.1 ID=prot_H-paniculata_contig6886.14809.1|Name=mRNA_H-paniculata_contig6886.14809.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=169bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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