prot_H-paniculata_contig6873.14790.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6873.14790.1
Unique Nameprot_H-paniculata_contig6873.14790.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length45
Homology
BLAST of mRNA_H-paniculata_contig6873.14790.1 vs. uniprot
Match: D7FN73_ECTSI (AMP-binding enzyme family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN73_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 4.770e-21
Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = 0
Query:    1 MSIGFAPRRCINILGFNSTEWFIANMGAIAAGGIAAGIYTSNLPE 45
            MS+GFAP R INI+GFNS EWFIANMGAIAAGGIAAGIYTSNLPE
Sbjct:   11 MSLGFAPHRSINIIGFNSAEWFIANMGAIAAGGIAAGIYTSNLPE 55          
BLAST of mRNA_H-paniculata_contig6873.14790.1 vs. uniprot
Match: D7G3T1_ECTSI (Long chain acyl-coA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T1_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 7.750e-19
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 0
Query:    1 MSIGFAPRRCINILGFNSTEWFIANMGAIAAGGIAAGIYTSNLPE 45
            +S+ FAP RC+NI+GFNSTEWFIANMGAIAAGGIAAGIYTSNLPE
Sbjct:   84 LSLDFAPHRCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPE 128          
BLAST of mRNA_H-paniculata_contig6873.14790.1 vs. uniprot
Match: A0A6H5KWQ0_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ0_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.700e-18
Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = 0
Query:    1 MSIGFAPRRCINILGFNSTEWFIANMGAIAAGGIAAGIYTSNLPE 45
            MS+GFAP R INI+GFNSTEWFIANMGAIAAGGI AGIYTSNLPE
Sbjct:   84 MSLGFAPHRSINIIGFNSTEWFIANMGAIAAGGIPAGIYTSNLPE 128          
BLAST of mRNA_H-paniculata_contig6873.14790.1 vs. uniprot
Match: A0A835Z6J1_9STRA (Long chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J1_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 6.090e-17
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    1 MSIGFAPRRCINILGFNSTEWFIANMGAIAAGGIAAGIYTSNLPE 45
            MS+GFAP RC+NI+GFNS EWF+A MG I AGGIAAGIYT+NLPE
Sbjct:   80 MSLGFAPHRCVNIIGFNSVEWFVAEMGCILAGGIAAGIYTTNLPE 124          
BLAST of mRNA_H-paniculata_contig6873.14790.1 vs. uniprot
Match: A0A7S2K6B1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K6B1_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 4.260e-14
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 MSIGFAPRRCINILGFNSTEWFIANMGAIAAGGIAAGIYTSNLPE 45
            +S+GF    CINI+GFNS EWF AN G IAAGGIAAGIYT+NLPE
Sbjct:   83 ISLGFEKHDCINIIGFNSPEWFFANFGTIAAGGIAAGIYTTNLPE 127          
BLAST of mRNA_H-paniculata_contig6873.14790.1 vs. uniprot
Match: A0A7S2H745_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H745_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 5.070e-13
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 MSIGFAPRRCINILGFNSTEWFIANMGAIAAGGIAAGIYTSNLPE 45
            +SIGF     +NI+GFNS EWF +N GAIAAGGIAAGIYT+NLP+
Sbjct:   11 LSIGFERFDAVNIIGFNSPEWFFSNFGAIAAGGIAAGIYTTNLPD 55          
BLAST of mRNA_H-paniculata_contig6873.14790.1 vs. uniprot
Match: A0A8J9T1U7_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T1U7_PHATR)

HSP 1 Score: 64.7 bits (156), Expect = 8.970e-12
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 MSIGFAPRRCINILGFNSTEWFIANMGAIAAGGIAAGIYTSNLPE 45
            + +GFA    INI+GFN+ EWF AN GAIAAGGI AG+YT+N PE
Sbjct:   29 LKVGFARFDTINIIGFNAPEWFFANFGAIAAGGIPAGVYTTNNPE 73          
BLAST of mRNA_H-paniculata_contig6873.14790.1 vs. uniprot
Match: A0A1Z5J6E1_FISSO (Long-chain-fatty-acid--CoA ligase ACSBG n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6E1_FISSO)

HSP 1 Score: 64.7 bits (156), Expect = 5.600e-11
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 0
Query:    1 MSIGFAPRRCINILGFNSTEWFIANMGAIAAGGIAAGIYTSNLPE 45
            +SIGF     +NI+GFNS EWFI N GA+AAGG+A+GIYT+N PE
Sbjct:   84 LSIGFERFDTVNIIGFNSPEWFICNFGAMAAGGVASGIYTTNGPE 128          
BLAST of mRNA_H-paniculata_contig6873.14790.1 vs. uniprot
Match: B7FXX6_PHATC (Long chain acyl-coa synthetase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FXX6_PHATC)

HSP 1 Score: 64.7 bits (156), Expect = 5.600e-11
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 MSIGFAPRRCINILGFNSTEWFIANMGAIAAGGIAAGIYTSNLPE 45
            + +GFA    INI+GFN+ EWF AN GAIAAGGI AG+YT+N PE
Sbjct:   85 LKVGFARFDTINIIGFNAPEWFFANFGAIAAGGIPAGVYTTNNPE 129          
BLAST of mRNA_H-paniculata_contig6873.14790.1 vs. uniprot
Match: A0A1V9YWN9_9STRA (Long-chain-fatty-acid-CoA ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWN9_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.950e-10
Identity = 24/43 (55.81%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    3 IGFAPRRCINILGFNSTEWFIANMGAIAAGGIAAGIYTSNLPE 45
            +G AP  C++I+GFN++EW +AN+GAI AGG++AG+YT++ PE
Sbjct:   80 LGLAPFECVSIIGFNASEWVVANLGAIMAGGLSAGVYTTSNPE 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6873.14790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN73_ECTSI4.770e-2188.89AMP-binding enzyme family protein n=1 Tax=Ectocarp... [more]
D7G3T1_ECTSI7.750e-1986.67Long chain acyl-coA synthetase n=1 Tax=Ectocarpus ... [more]
A0A6H5KWQ0_9PHAE2.700e-1888.89AMP-binding domain-containing protein n=1 Tax=Ecto... [more]
A0A835Z6J1_9STRA6.090e-1777.78Long chain acyl-CoA synthetase n=1 Tax=Tribonema m... [more]
A0A7S2K6B1_9STRA4.260e-1473.33Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2H745_9STRA5.070e-1368.89Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A8J9T1U7_PHATR8.970e-1264.44Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A1Z5J6E1_FISSO5.600e-1164.44Long-chain-fatty-acid--CoA ligase ACSBG n=2 Tax=Fi... [more]
B7FXX6_PHATC5.600e-1164.44Long chain acyl-coa synthetase n=3 Tax=Phaeodactyl... [more]
A0A1V9YWN9_9STRA1.950e-1055.81Long-chain-fatty-acid-CoA ligase n=1 Tax=Achlya hy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR43272FAMILY NOT NAMEDcoord: 3..45
NoneNo IPR availablePANTHERPTHR43272:SF32LONG-CHAIN-FATTY-ACID--COA LIGASE ACSBG2coord: 3..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..39
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6873contigH-paniculata_contig6873:5784..5918 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6873.14790.1mRNA_H-paniculata_contig6873.14790.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6873 5766..5918 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6873.14790.1 ID=prot_H-paniculata_contig6873.14790.1|Name=mRNA_H-paniculata_contig6873.14790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=45bp
MSIGFAPRRCINILGFNSTEWFIANMGAIAAGGIAAGIYTSNLPE
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