prot_H-paniculata_contig68583.14778.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig68583.14778.1
Unique Nameprot_H-paniculata_contig68583.14778.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length142
Homology
BLAST of mRNA_H-paniculata_contig68583.14778.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 2.100e-29
Identity = 60/124 (48.39%), Postives = 80/124 (64.52%), Query Frame = 0
Query:   20 EIYSGATVSHDPERVQDLASMRRPNTAGELIQLLQASNWMRTSVPESAVVVEPLREMLEMFL-NNTRRTRRTADKIVITRGDGTEERAAAWETATDRVSEAVPLYHPRADRSVLIFPDASDSFW 142
            ++YS   + HD +R+  LA++RRP TAGEL+Q LQA NW+RTS+P  + +V PLRE LE+ +  N  RT+R A    I     T     +WE A D V+ AV LYHP A ++VL+FPDASD  W
Sbjct:  860 KVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHW 983          
BLAST of mRNA_H-paniculata_contig68583.14778.1 vs. uniprot
Match: A0A6H5K9E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E0_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.290e-28
Identity = 65/122 (53.28%), Postives = 82/122 (67.21%), Query Frame = 0
Query:   20 EIYSGATVSHDPERVQDLASMRRPNTAGELIQLLQASNWMRTSVPESAVVVEPLREMLEMFLNNT-RRTRRTADKIVITRGDGTEERAAAWETATDRVSEAVPLYHPRADRSVLIFPDASDS 140
            ++YSG  V+HDP R+Q LA MRRP TAGEL+Q+LQA NW+RTS+P  A VVEPLR +LE  + +  RRT+R A    I     T   A AW +A D V+ AV L HP+   +VL+FPDAS S
Sbjct:  786 KVYSGGQVAHDPARLQGLADMRRPETAGELMQVLQAVNWLRTSLPRLAEVVEPLRRLLEEHMASAPRRTKRIASNRAIKSEAWTAGMAKAWTSAQDLVAHAVALSHPKEGFAVLMFPDASVS 907          
BLAST of mRNA_H-paniculata_contig68583.14778.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 3.010e-27
Identity = 63/124 (50.81%), Postives = 76/124 (61.29%), Query Frame = 0
Query:   20 EIYSGATVSHDPERVQDLASMRRPNTAGELIQLLQASNWMRTSVPESAVVVEPLREMLEMFLNNTR-RTRRTADKIVITRGDGTEERAAAWETATDRVSEAVPLYHPRADRSVLIFPDASDSFW 142
            ++YS   V HDPER+  LA+MRRP TAGEL+Q LQA NW+RTS+P  A VV PLR  LE  L   + RT+R A+   I     T     AW  A D V+ AV L HP    +VL+FPDASD  W
Sbjct:  958 KVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPGCAVLMFPDASDEHW 1081          
BLAST of mRNA_H-paniculata_contig68583.14778.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 4.440e-23
Identity = 56/124 (45.16%), Postives = 78/124 (62.90%), Query Frame = 0
Query:   20 EIYSGATVSHDPERVQDLASMRRPNTAGELIQLLQASNWMRTSVPESAVVVEPLREMLEMFLNNT-RRTRRTADKIVITRGDGTEERAAAWETATDRVSEAVPLYHPRADRSVLIFPDASDSFW 142
            ++YSG  V+ DPER+Q L  MRRP TAG+L+Q LQA  W+RTS+   A V+EP+R +LE+ + +  R+T+  A    I     T     AW +A D V+ AV L HP+   +VL+FPDAS+  W
Sbjct:  611 KVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSIAPNRAIKCEAWTAGMVEAWISAQDLVAHAVALSHPKDGFAVLMFPDASEEHW 734          
BLAST of mRNA_H-paniculata_contig68583.14778.1 vs. uniprot
Match: A0A6G0WKR2_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WKR2_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 9.090e-18
Identity = 48/122 (39.34%), Postives = 70/122 (57.38%), Query Frame = 0
Query:   21 IYSGATVSHDPERVQDLASMRRPNTAGELIQLLQASNWMRTSVPESAVVVEPLREMLEMFLNNTRRTRRTADKIVITRGDGTEERAAAWETATDRVSEAVPLYHPRADRSVLIFPDASDSFW 142
            I SG  V  DP R++ L ++  P  AG+L Q + A NW+R S+ E A+ VEPL++ L   L    + +R A  I I   + T+E  AA++    ++  AV L HPRAD ++ +F DASD  W
Sbjct:   80 ILSGEGVRQDPARIEQLCAIPYPTNAGDLQQFICAVNWIRESITEYAMTVEPLQQALNKALEGKAKKKRIASGIKI---ELTQEEKAAFDAVKSKMRTAVDLSHPRADATLCLFTDASDQGW 198          
BLAST of mRNA_H-paniculata_contig68583.14778.1 vs. uniprot
Match: A0A6G0WXL5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXL5_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.360e-17
Identity = 48/122 (39.34%), Postives = 70/122 (57.38%), Query Frame = 0
Query:   21 IYSGATVSHDPERVQDLASMRRPNTAGELIQLLQASNWMRTSVPESAVVVEPLREMLEMFLNNTRRTRRTADKIVITRGDGTEERAAAWETATDRVSEAVPLYHPRADRSVLIFPDASDSFW 142
            I SG  V  DPER++ L ++  P  AG+L Q + A+NW+R S+ E A+ VEPL++ L   L    + +R A  I I   + TE   AA++    ++   V L HPRAD ++ +F DASD  W
Sbjct:   88 ILSGEGVKQDPERIEQLCAIPYPTNAGDLQQFVCAANWIRDSITEYAMTVEPLQQALNNALEGKAKKKRIASGIKI---ELTEGEKAAFDAVKSKMRAVVDLSHPRADATLCLFTDASDRGW 206          
BLAST of mRNA_H-paniculata_contig68583.14778.1 vs. uniprot
Match: A0A6G0WP62_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP62_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 5.020e-17
Identity = 45/129 (34.88%), Postives = 74/129 (57.36%), Query Frame = 0
Query:   16 ALVREIYSGATVSHDPERVQDLASMRRPNTAGELIQLLQASNWMRTSVPESAVVVEPLREMLEMFLNNTRRTRRTAD--KIVITRGDGTEERAAAWETATDRVSEAVPLYHPRADRSVLIFPDASDSFW 142
            A  + I S   ++HDP+RVQ L  +  P T  +L Q L A+NWMRTS+P+ A +VEPLR +LE+ + +   + + A   ++ +     +++ A  ++   D +   VPL HP  ++ + +F DAS S W
Sbjct:  532 AFCQSIISADGIAHDPDRVQGLRDLEYPATGADLQQFLCATNWMRTSIPDYARLVEPLRGLLEVAVRSAGGSSKKAALARVKLAAIGWSKDHAKCFDDVKDTLGRMVPLAHPTPEKIICLFTDASVSHW 660          
BLAST of mRNA_H-paniculata_contig68583.14778.1 vs. uniprot
Match: A0A6G0W8N6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W8N6_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 9.350e-17
Identity = 46/122 (37.70%), Postives = 70/122 (57.38%), Query Frame = 0
Query:   21 IYSGATVSHDPERVQDLASMRRPNTAGELIQLLQASNWMRTSVPESAVVVEPLREMLEMFLNNTRRTRRTADKIVITRGDGTEERAAAWETATDRVSEAVPLYHPRADRSVLIFPDASDSFW 142
            I SG  V  DPER++ L ++  P  AG+L Q + A+NW+R S+ E A+ +EPL++ L   L    + +R A  I I   + TE   AA++    ++   V L HPRAD ++ +F DA+D  W
Sbjct: 1088 ILSGEGVKQDPERIEQLCAIPYPTNAGDLQQFVCAANWIRDSITEYAMTMEPLQQALNNALEGKAKKKRIASGIEI---ELTEGEKAAFDAVKSKMRAVVDLSHPRADATLCLFTDANDRGW 1206          
BLAST of mRNA_H-paniculata_contig68583.14778.1 vs. uniprot
Match: A0A0G4J790_PLABS (Reverse transcriptase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J790_PLABS)

HSP 1 Score: 85.5 bits (210), Expect = 1.220e-16
Identity = 46/123 (37.40%), Postives = 70/123 (56.91%), Query Frame = 0
Query:   21 IYSGATVSHDPERVQDLASMRRPNTAGELIQLLQASNWMRTSVPESAVVVEPLREMLEMFLNNTRRTRRTADKIVITRGDG-TEERAAAWETATDRVSEAVPLYHPRADRSVLIFPDASDSFW 142
            IYS   + HDPER++ L SM RPNT  EL Q + A+NWMRTSVP  A ++ PL+E+ +      +R + ++   +     G T+  + A+E     + + V L +P++D    +F DASD  W
Sbjct:  511 IYSRDGIRHDPERIEALTSMPRPNTFKELQQFIWAANWMRTSVPGYAYIIAPLQELTDKANEEMKRIQSSSPSSIRLHDLGWTDRHSKAFEDIRFALIQHVQLAYPKSDHQTCLFTDASDLAW 633          
BLAST of mRNA_H-paniculata_contig68583.14778.1 vs. uniprot
Match: A0A6G0XEE8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XEE8_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.400e-16
Identity = 52/141 (36.88%), Postives = 74/141 (52.48%), Query Frame = 0
Query:    3 CRGSQGEAVSAGDALVREIYSGATVSHDPERVQDLASMRRPNTAGELIQLLQASNWMRTSVPESAVVVEPLREMLE-MFLNNTRRTRRTADKIVITRGDGTEERAAAWETATDRVSEAVPLYHPRADRSVLIFPDASDSFW 142
            CR  Q EA   G      I SG  V HDPER++ L  ++ P T  +L Q + A NWMR S+P   VVV+PL +++E ++     RTR+   KI ++             T    + +AV L HP++D+ V +F DASD  W
Sbjct:  916 CRFYQTEARWCG-----RIVSGDGVKHDPERIKALQDLKVPVTGQDLQQFICAMNWMRMSIPRYNVVVKPLTDLMEKIYALAGGRTRQKVAKIKLSEAGWNASHVNCLTTCKKVLGQAVTLAHPKSDKLVCVFADASDLHW 1051          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig68583.14778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE2.100e-2948.39Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9E0_9PHAE1.290e-2853.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE3.010e-2750.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE4.440e-2345.16CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6G0WKR2_9STRA9.090e-1839.34Reverse transcriptase domain-containing protein n=... [more]
A0A6G0WXL5_9STRA1.360e-1739.34Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6G0WP62_9STRA5.020e-1734.88Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6G0W8N6_9STRA9.350e-1737.70Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A0G4J790_PLABS1.220e-1637.40Reverse transcriptase domain-containing protein n=... [more]
A0A6G0XEE8_9STRA2.400e-1636.88Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.370coord: 123..140
e-value: 9.0E-6
score: 27.5
NoneNo IPR availableGENE3D3.30.70.270coord: 38..122
e-value: 9.0E-6
score: 27.5
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 23..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig68583contigH-paniculata_contig68583:3..428 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig68583.14778.1mRNA_H-paniculata_contig68583.14778.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig68583 3..428 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig68583.14778.1 ID=prot_H-paniculata_contig68583.14778.1|Name=mRNA_H-paniculata_contig68583.14778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp
YLCRGSQGEAVSAGDALVREIYSGATVSHDPERVQDLASMRRPNTAGELI
QLLQASNWMRTSVPESAVVVEPLREMLEMFLNNTRRTRRTADKIVITRGD
GTEERAAAWETATDRVSEAVPLYHPRADRSVLIFPDASDSFW
back to top