prot_H-paniculata_contig68202.14742.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig68202.14742.1
Unique Name	prot_H-paniculata_contig68202.14742.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	140

Homology

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BLAST of mRNA_H-paniculata_contig68202.14742.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 4.900e-36
Identity = 74/147 (50.34%), Postives = 100/147 (68.03%), Query Frame = 0

Query:    1 MDVSGPKSVESTGGMRYSFLIRDDFSRKIWTYFDRHKWDTTRIFEQFLA----DSTPSVVGTVRSGGGGEFTG-PFSDLCRTRGVRKEYTPADSPEYNGVAERAIALVEQAAMAARSQATVLYG-VGVP--DRMWAESYRWAVDALN 139
            +D+ G K+V S GG  Y  +++DDF+R+ W YF R+K D    F  FLA    D  PS+V TVRS  GGEF G  F+ +C    +++E+TPA SP+YNGVAER + L+E+AAMAAR QA VL+G V +P  D++WAE+  WA +ALN
Sbjct:  333 VDLGGKKAVVSVGGKYYPMIVKDDFTRRAWIYFLRNKSDAASAFRSFLASVRADGIPSLVETVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEALN 479

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BLAST of mRNA_H-paniculata_contig68202.14742.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 3.110e-35
Identity = 72/147 (48.98%), Postives = 98/147 (66.67%), Query Frame = 0

Query:    1 MDVSGPKSVESTGGMRYSFLIRDDFSRKIWTYFDRHKWDTTRIFEQFLA----DSTPSVVGTVRSGGGGEFTG-PFSDLCRTRGVRKEYTPADSPEYNGVAERAIALVEQAAMAARSQATVLYG-VGVP--DRMWAESYRWAVDALN 139
            +D+ G K V S GG  Y  +++DDF+R+ W YF +HK D    F  FLA    D  PS+V  VRS  GGEF G  F+ +C    +++E+TPA SP+YNGVAER + L+E+AAMAAR QA VL+G V +P  D++WAE+  WA +A+N
Sbjct:  729 VDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMN 875

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BLAST of mRNA_H-paniculata_contig68202.14742.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 3.120e-35
Identity = 72/147 (48.98%), Postives = 98/147 (66.67%), Query Frame = 0

Query:    1 MDVSGPKSVESTGGMRYSFLIRDDFSRKIWTYFDRHKWDTTRIFEQFLA----DSTPSVVGTVRSGGGGEFTG-PFSDLCRTRGVRKEYTPADSPEYNGVAERAIALVEQAAMAARSQATVLYG-VGVP--DRMWAESYRWAVDALN 139
            +D+ G K V S GG  Y  +++DDF+R+ W YF +HK D    F  FLA    D  PS+V  VRS  GGEF G  F+ +C    +++E+TPA SP+YNGVAER + L+E+AAMAAR QA VL+G V +P  D++WAE+  WA +A+N
Sbjct:  436 VDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMN 582

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BLAST of mRNA_H-paniculata_contig68202.14742.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 7.870e-35
Identity = 73/147 (49.66%), Postives = 97/147 (65.99%), Query Frame = 0

Query:    1 MDVSGPKSVESTGGMRYSFLIRDDFSRKIWTYFDRHKWDTTRIFEQFLA----DSTPSVVGTVRSGGGGEFTG-PFSDLCRTRGVRKEYTPADSPEYNGVAERAIALVEQAAMAARSQATVLYG-VGVP--DRMWAESYRWAVDALN 139
            +D+ G K V S GG  Y  +++DDF+R+ W YF R K D    F  FLA    D  PS++  VRS  GGEF G  F+ +C    +++E+TPA SPE+NGVAER + L+E+AAMAAR QA VL+G V +P  DR+WAE+  WA +ALN
Sbjct:  480 VDLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALN 626

[Close]

BLAST of mRNA_H-paniculata_contig68202.14742.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 3.590e-34
Identity = 72/147 (48.98%), Postives = 96/147 (65.31%), Query Frame = 0

Query:    1 MDVSGPKSVESTGGMRYSFLIRDDFSRKIWTYFDRHKWDTTRIFEQFLA----DSTPSVVGTVRSGGGGEFTG-PFSDLCRTRGVRKEYTPADSPEYNGVAERAIALVEQAAMAARSQATVLYG-VGVP--DRMWAESYRWAVDALN 139
            +D+ G K V S GG  Y  +++DDF+R+ W YF + K D    F  FLA    D  PS+V  VRS  GGEF G  F+ +C    +++E+TPA SP+YNGVAER + L+E AAMAAR QA VL+G V +P  DR+WAE+  WA +A+N
Sbjct:  635 VDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAIN 781

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BLAST of mRNA_H-paniculata_contig68202.14742.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 3.730e-34
Identity = 72/147 (48.98%), Postives = 97/147 (65.99%), Query Frame = 0

Query:    1 MDVSGPKSVESTGGMRYSFLIRDDFSRKIWTYFDRHKWDTTRIFEQFLA----DSTPSVVGTVRSGGGGEFTG-PFSDLCRTRGVRKEYTPADSPEYNGVAERAIALVEQAAMAARSQATVLYG-VGVP--DRMWAESYRWAVDALN 139
            +++ G K V S GG  Y  +++DDF+R+ W YF R K D    F  FLA    D  PS++  VRS  GGEF G  F+ +C    +++E+TPA SPE+NGVAER + L+E+AAMAAR QA VL+G V +P  DR+WAE+  WA +ALN
Sbjct:  456 VNLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALN 602

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BLAST of mRNA_H-paniculata_contig68202.14742.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 5.570e-34
Identity = 69/146 (47.26%), Postives = 95/146 (65.07%), Query Frame = 0

Query:    2 DVSGPKSVESTGGMRYSFLIRDDFSRKIWTYFDRHKWDTTRIFEQFLA----DSTPSVVGTVRSGGGGEFTG-PFSDLCRTRGVRKEYTPADSPEYNGVAERAIALVEQAAMAARSQATVLYG-VGVP--DRMWAESYRWAVDALN 139
            D+ G K + S GG  Y  +++DDF+R  W YF R+K D    F  FLA    +  PS V  VRS  GG+F G  F+ +C    +++E+TPA SP+YNGVAER + L+E+AAMAAR QA VL+G V +P  D++WAE+  WA +A+N
Sbjct:   98 DLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMN 243

[Close]

BLAST of mRNA_H-paniculata_contig68202.14742.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 1.260e-33
Identity = 72/147 (48.98%), Postives = 95/147 (64.63%), Query Frame = 0

Query:    1 MDVSGPKSVESTGGMRYSFLIRDDFSRKIWTYFDRHKWDTTRIFEQF----LADSTPSVVGTVRS-GGGGEFTGPFSDLCRTRGVRKEYTPADSPEYNGVAERAIALVEQAAMAARSQATVLYG-VGVP--DRMWAESYRWAVDALN 139
            +D+ G K V S GG  Y  +++DDF+R+ W YF R K D    F  F     AD  PS++  VRS  GGG F G F+ +C    +++E+TPA SPE+NGVAER + L E+AAMAAR QA VL+G V +P  DR+WAE+  WA +ALN
Sbjct:  130 VDLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFHANVRADGIPSLIEIVRSDNGGGFFGGEFASVCNELVIKQEFTPAHSPEFNGVAERGLGLTEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALN 276

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BLAST of mRNA_H-paniculata_contig68202.14742.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 8.000e-33
Identity = 70/147 (47.62%), Postives = 96/147 (65.31%), Query Frame = 0

Query:    1 MDVSGPKSVESTGGMRYSFLIRDDFSRKIWTYFDRHKWDTTRIFEQFLA----DSTPSVVGTVRSGGGGEFTG-PFSDLCRTRGVRKEYTPADSPEYNGVAERAIALVEQAAMAARSQATVLYG-VGVP--DRMWAESYRWAVDALN 139
            +D+ G K   S GG  Y  +++DDF+R+ W YF R+K D    F  FLA    +  PS V  VRS  GGEF G  F+ +C    +++E+TPA SP+YNGVAER + L+E+AAMAAR QA VL+G V +P  D++WAE+  WA +A+N
Sbjct:  195 VDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMN 341

[Close]

BLAST of mRNA_H-paniculata_contig68202.14742.1 vs. uniprot
Match: A0A6H5J7U9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7U9_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 1.360e-32
Identity = 68/146 (46.58%), Postives = 96/146 (65.75%), Query Frame = 0

Query:    1 MDVSGPKSVESTGGMRYSFLIRDDFSRKIWTYFDRHKWDTTRIFEQFLADS----TPSVVGTVRSGGGGEF-TGPFSDLCRTRGVRKEYTPADSPEYNGVAERAIALVEQAAMAARSQATVLYGVGVPD--RMWAESYRWAVDALN 139
            +D+SG   V+S GG  Y+ +++DD++R    YF +HK D    FE++LA++     PS V  VRS  GGEF  G F  +CR   +++E+TPA SPEY+GVAERA+ L+E AA+AAR QA  LY  G P+   +WAE+  W+ +ALN
Sbjct:   39 VDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYDGVAERALGLIEDAALAARIQAPTLYP-GAPNYPSLWAEAIAWSCNALN 183

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig68202.14742.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig68202.14742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JB16_9PHAE	4.900e-36	50.34	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JBA7_9PHAE	3.110e-35	48.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KZH7_9PHAE	3.120e-35	48.98	Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K622_9PHAE	7.870e-35	49.66	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K2M6_9PHAE	3.590e-34	48.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JH25_9PHAE	3.730e-34	48.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KVR5_9PHAE	5.570e-34	47.26	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5J594_9PHAE	1.260e-33	48.98	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5L3Y0_9PHAE	8.000e-33	47.62	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5J7U9_9PHAE	1.360e-32	46.58	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 8..105 e-value: 2.5E-9 score: 37.4
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..140 score: 12.564
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..140 e-value: 1.6E-12 score: 49.1
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..140

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig68202	contig	H-paniculata_contig68202:290..709 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig68202.14742.1	mRNA_H-paniculata_contig68202.14742.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig68202 290..730 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig68202.14742.1 ID=prot_H-paniculata_contig68202.14742.1|Name=mRNA_H-paniculata_contig68202.14742.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=140bp
MDVSGPKSVESTGGMRYSFLIRDDFSRKIWTYFDRHKWDTTRIFEQFLAD
STPSVVGTVRSGGGGEFTGPFSDLCRTRGVRKEYTPADSPEYNGVAERAI
ALVEQAAMAARSQATVLYGVGVPDRMWAESYRWAVDALNR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR036397	RNaseH_sf
IPR012337	RNaseH-like_sf