prot_H-paniculata_contig68171.14736.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig68171.14736.1
Unique Nameprot_H-paniculata_contig68171.14736.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length79
Homology
BLAST of mRNA_H-paniculata_contig68171.14736.1 vs. uniprot
Match: D8LH23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH23_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 1.490e-33
Identity = 61/79 (77.22%), Postives = 71/79 (89.87%), Query Frame = 0
Query:    1 SGVKNLSEEKLLDGLSRHADISGDAIVDPAVAKAGVTRAATMKPGATVLERVYGVHGALEYFLAENTNVARLYRDDDDE 79
            SG KNL+E +LL+GLS +A+ISG+A+V+PA AKAGV RAATMKPGA+VLERVY VH ALEY+LAENTNVARLYRD DDE
Sbjct:   22 SGKKNLTEAELLEGLSLNAEISGEALVEPAEAKAGVIRAATMKPGASVLERVYAVHSALEYYLAENTNVARLYRDADDE 100          
BLAST of mRNA_H-paniculata_contig68171.14736.1 vs. uniprot
Match: A0A6H5JNT7_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNT7_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 4.150e-26
Identity = 55/78 (70.51%), Postives = 66/78 (84.62%), Query Frame = 0
Query:    2 GVKNLSEEKLLDGLSRHADISGDAIVDPAVAKAGVTRAATMKPGATVLERVYGVHGALEYFLAENTNVARLYRDDDDE 79
            G K L+E KL +GLS +A+ISG+A+V+PA AKAGVTRAATMKPGA+VLER+Y +H ALEYFL  N NVARLYR+ DDE
Sbjct:   97 GKKILTEAKLREGLSLNAEISGEALVEPAEAKAGVTRAATMKPGASVLERIYAIHSALEYFLVVNPNVARLYRNADDE 174          
BLAST of mRNA_H-paniculata_contig68171.14736.1 vs. uniprot
Match: A0A6H5K9E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E0_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 7.910e-25
Identity = 55/78 (70.51%), Postives = 67/78 (85.90%), Query Frame = 0
Query:    2 GVKNLSEEKLLDGLSRHADISGDAIVDPAVAKAGVTRAATMKPGATVLERVYGVHGALEYFLAENTNVARLYRDDDDE 79
            G K L+E +L +GLS +A+ISG+A+V+PA AKAGVTRAAT+KPGA+VLERVY VH ALEY+LAEN NVARLY + DDE
Sbjct:  105 GKKILTEAELREGLSLNAEISGEALVEPAEAKAGVTRAATVKPGASVLERVYAVHSALEYYLAENPNVARLYCNADDE 182          
BLAST of mRNA_H-paniculata_contig68171.14736.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 2.450e-23
Identity = 53/76 (69.74%), Postives = 62/76 (81.58%), Query Frame = 0
Query:    4 KNLSEEKLLDGLSRHADISGDAIVDPAVAKAGVTRAATMKPGATVLERVYGVHGALEYFLAENTNVARLYRDDDDE 79
            KNL+E +LL+GLS +A+IS +A+V P  AKAGVTRAATMKPG +VLERVY VH ALEY+LAE  NVARLY   DDE
Sbjct:   70 KNLAEAELLEGLSINAEISREALVKPVEAKAGVTRAATMKPGVSVLERVYAVHSALEYYLAEKPNVARLYHHADDE 145          
BLAST of mRNA_H-paniculata_contig68171.14736.1 vs. uniprot
Match: A0A6H5L1I2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1I2_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.870e-21
Identity = 51/78 (65.38%), Postives = 64/78 (82.05%), Query Frame = 0
Query:    2 GVKNLSEEKLLDGLSRHADISGDAIVDPAVAKAGVTRAATMKPGATVLERVYGVHGALEYFLAENTNVARLYRDDDDE 79
            G K L+E +L +GLS +A+ SG+A+V+PA AKAGVTRAA+MKP A+VLERVY VH ALE +LAEN NVA L+R+ DDE
Sbjct:   97 GKKILTEAELREGLSLNAETSGEALVEPAEAKAGVTRAASMKPSASVLERVYAVHSALECYLAENPNVAWLHRNADDE 174          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig68171.14736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LH23_ECTSI1.490e-3377.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNT7_9PHAE4.150e-2670.51CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A6H5K9E0_9PHAE7.910e-2570.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE2.450e-2369.74CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L1I2_9PHAE1.870e-2165.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig68171contigH-paniculata_contig68171:435..671 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig68171.14736.1mRNA_H-paniculata_contig68171.14736.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig68171 435..671 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig68171.14736.1 ID=prot_H-paniculata_contig68171.14736.1|Name=mRNA_H-paniculata_contig68171.14736.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp
SGVKNLSEEKLLDGLSRHADISGDAIVDPAVAKAGVTRAATMKPGATVLE
RVYGVHGALEYFLAENTNVARLYRDDDDE
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