prot_H-paniculata_contig681.14728.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig681.14728.1
Unique Nameprot_H-paniculata_contig681.14728.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length370
Homology
BLAST of mRNA_H-paniculata_contig681.14728.1 vs. uniprot
Match: D8LMF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF5_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 6.190e-80
Identity = 120/152 (78.95%), Postives = 134/152 (88.16%), Query Frame = 0
Query:  173 RKYDDGWGEGIPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAFGIVSGQEETDWFQLEMWNRDAEYAASICRKGARIGVQGSLAISEWTDREGNPRTTNKILVQNLELLDSKAEMAMRSDKSDANLWESERLEKASAA 324
            R + DG+ EG+PRLN VFLTGYLGQDPKPKYFDSG+VVLNLSLAVKREYHPLERKA GIV G+EETDWFQLEMWNRDAEYAA +C+KG R+GV G L++  W DREGN RTT KILVQNLE+LDS+AE AMRSD+SD+NLWESERLEK  AA
Sbjct:   36 RSFSDGFDEGVPRLNMVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPLERKALGIVQGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGGLSLQSWIDREGNDRTTVKILVQNLEVLDSRAEQAMRSDRSDSNLWESERLEKMDAA 187          
BLAST of mRNA_H-paniculata_contig681.14728.1 vs. uniprot
Match: A0A835ZAA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA6_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.060e-48
Identity = 80/134 (59.70%), Postives = 100/134 (74.63%), Query Frame = 0
Query:  171 EPRKYDDGWGEGIPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAFGIVSGQEETDWFQLEMWNRDAEYAASICRKGARIGVQGSLAISEWTDREGNPRTTNKILVQNLELLDSKAEMAMR 304
            E      G+ E IP+LN V LTG LGQDP  +YFD GK V+ LSLAVKREYH LERKA GI  G+EETDWFQLE+W+R+AEYA  +  KG R+G++GSL I  W D+EG  R T K++V N+E+L++KAE+AMR
Sbjct:   72 EAEAASSGFAESIPKLNAVLLTGRLGQDPVARYFDDGKCVVQLSLAVKREYHALERKAMGIRYGEEETDWFQLELWSREAEYAMKVAAKGLRVGIEGSLVIDCWEDQEGEERATAKVIVSNMEVLETKAEIAMR 205          
BLAST of mRNA_H-paniculata_contig681.14728.1 vs. uniprot
Match: A0A7R9W4H7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W4H7_9STRA)

HSP 1 Score: 159 bits (402), Expect = 5.670e-43
Identity = 75/123 (60.98%), Postives = 96/123 (78.05%), Query Frame = 0
Query:  183 IPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAFGIVSGQEETDWFQLEMWNRDAEYAASICRKGARIGVQGSLAISEWTDRE-GNPRTTNKILVQNLELLDSKAEMAMR 304
            IPRLN V L+G +G DP+P+YFD GKVVLNLSLAV+R+YHPLERK   I  G+EETDWF LE+W RDAE+A++   KGARIG+ GSL +  W DR  G PRT +KILV++L++L+++AE   R
Sbjct:  104 IPRLNIVTLSGRVGNDPEPRYFDDGKVVLNLSLAVQRKYHPLERKVRNIKYGEEETDWFPLELWGRDAEFASNFVDKGARIGITGSLMMDSWEDRNTGEPRTKHKILVKHLDILETRAEAEAR 226          
BLAST of mRNA_H-paniculata_contig681.14728.1 vs. uniprot
Match: A0A7S2USN2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2USN2_9STRA)

HSP 1 Score: 155 bits (392), Expect = 4.210e-42
Identity = 76/128 (59.38%), Postives = 96/128 (75.00%), Query Frame = 0
Query:  179 WGEGIPRLNTVFLTGYLGQDP-KPKYFDSGKVVLNLSLAVKREYHPLERKAFGIVSGQEETDWFQLEMWNRDAEYAASICRKGARIGVQGSLAISEWTDRE-GNPRTTNKILVQNLELLDSKAEMAMR 304
            + + IP+ N V L+G +G    +PKYFD GKVVL+LSLAVKR+YHPLER+A+ I SG EETDWF LE+W RDAEYAA    KG+RIGV GSL +  WTDR  G PR+  KILV+ L++L++KAE  +R
Sbjct:   36 FADHIPKFNVVTLSGRVGNPQLEPKYFDDGKVVLSLSLAVKRKYHPLERRAYNIKSGDEETDWFALEIWGRDAEYAAKYVEKGSRIGVTGSLVVDNWTDRATGEPRSRPKILVKQLDILETKAEADLR 163          
BLAST of mRNA_H-paniculata_contig681.14728.1 vs. uniprot
Match: A0A7S2SIA7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SIA7_9STRA)

HSP 1 Score: 156 bits (395), Expect = 7.810e-42
Identity = 76/125 (60.80%), Postives = 94/125 (75.20%), Query Frame = 0
Query:  181 EGIPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAFGIVSGQEETDWFQLEMWNRDAEYAASICRKGARIGVQGSLAISEWTDRE-GNPRTTNKILVQNLELLDSKAEMAMR 304
            E IPR+N+V L G +GQDP PKY D GKVVLNLSLAVKR+YHPLER    I SG+EETDWF LE+W RDAEYA+    KG+R+ V G+L I  WTDR  G PR   KI+V++L++L++KAE  +R
Sbjct:  105 EHIPRVNSVTLVGRVGQDPDPKYLDDGKVVLNLSLAVKRKYHPLERNVRNIKSGEEETDWFPLEIWGRDAEYASKYVDKGSRMMVTGTLQIDTWTDRNTGEPRKKAKIIVRHLDILETKAEAELR 229          
BLAST of mRNA_H-paniculata_contig681.14728.1 vs. uniprot
Match: A0A7S1DC37_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DC37_CYCTE)

HSP 1 Score: 155 bits (391), Expect = 2.020e-41
Identity = 75/127 (59.06%), Postives = 93/127 (73.23%), Query Frame = 0
Query:  179 WGEGIPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAFGIVSGQEETDWFQLEMWNRDAEYAASICRKGARIGVQGSLAISEWTDR-EGNPRTTNKILVQNLELLDSKAEMAMR 304
            W   IP  N VF+ G +G DP+PKY DSGKVVLNLSLAVKR+YH LER A  I SG+EETDW++LE+W + AEYAA    KGARIG+ GSL I +W DR  GN R   KI+VQ L++L+++AE  +R
Sbjct:   88 WPSDIPTFNNVFMVGRVGNDPEPKYLDSGKVVLNLSLAVKRKYHRLERIAKEIKSGEEETDWYRLEIWGQTAEYAAKYVTKGARIGLSGSLRIDQWEDRTSGNMRARPKIVVQELDILETRAEAELR 214          
BLAST of mRNA_H-paniculata_contig681.14728.1 vs. uniprot
Match: A0A7S1YYF7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YYF7_TRICV)

HSP 1 Score: 154 bits (388), Expect = 4.860e-41
Identity = 73/123 (59.35%), Postives = 92/123 (74.80%), Query Frame = 0
Query:  183 IPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAFGIVSGQEETDWFQLEMWNRDAEYAASICRKGARIGVQGSLAISEWTDRE-GNPRTTNKILVQNLELLDSKAEMAMR 304
            IPRLN V L+G +G DP+P+YFD GKVVLNLSLA KR+YHPLERK   I  G+EETDW+ LEMW RDAE+ +    KGARIG+ GSL +  W D+  G PR+  KI V++L+LL++KAE  +R
Sbjct:  107 IPRLNIVTLSGRVGNDPEPRYFDDGKVVLNLSLACKRKYHPLERKVRNIKYGEEETDWWPLEMWGRDAEFVSKYVNKGARIGITGSLTMDSWVDKNTGEPRSKYKIQVKHLDLLETKAEADLR 229          
BLAST of mRNA_H-paniculata_contig681.14728.1 vs. uniprot
Match: A0A7S2UQ80_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ80_9STRA)

HSP 1 Score: 155 bits (392), Expect = 8.040e-41
Identity = 76/128 (59.38%), Postives = 96/128 (75.00%), Query Frame = 0
Query:  179 WGEGIPRLNTVFLTGYLGQDP-KPKYFDSGKVVLNLSLAVKREYHPLERKAFGIVSGQEETDWFQLEMWNRDAEYAASICRKGARIGVQGSLAISEWTDRE-GNPRTTNKILVQNLELLDSKAEMAMR 304
            + + IP+ N V L+G +G    +PKYFD GKVVL+LSLAVKR+YHPLER+A+ I SG EETDWF LE+W RDAEYAA    KG+RIGV GSL +  WTDR  G PR+  KILV+ L++L++KAE  +R
Sbjct:  145 FADHIPKFNVVTLSGRVGNPQLEPKYFDDGKVVLSLSLAVKRKYHPLERRAYNIKSGDEETDWFALEIWGRDAEYAAKYVEKGSRIGVTGSLVVDNWTDRATGEPRSRPKILVKQLDILETKAEADLR 272          
BLAST of mRNA_H-paniculata_contig681.14728.1 vs. uniprot
Match: A0A7S1ZHN3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZHN3_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.700e-40
Identity = 73/123 (59.35%), Postives = 94/123 (76.42%), Query Frame = 0
Query:  183 IPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAFGIVSGQEETDWFQLEMWNRDAEYAASICRKGARIGVQGSLAISEWTDRE-GNPRTTNKILVQNLELLDSKAEMAMR 304
            IP+LN V L+G +G  P+P+YFD GKVVLN+ LAVKR+YHPLERK   I  GQEETDWF LE+W RDAE+AA    KG+RIG+ GSLAI  WTD++ G  R   KI+V++L++L++KAE  +R
Sbjct:  113 IPKLNVVTLSGRVGNVPEPRYFDDGKVVLNMGLAVKRKYHPLERKVKNIQYGQEETDWFNLELWGRDAEFAARFVDKGSRIGITGSLAIDSWTDKQTGQYRRKPKIVVRHLDVLETKAEAELR 235          
BLAST of mRNA_H-paniculata_contig681.14728.1 vs. uniprot
Match: A0A1Z5KE78_FISSO (Single-strand DNA-binding protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KE78_FISSO)

HSP 1 Score: 151 bits (382), Expect = 2.520e-40
Identity = 68/130 (52.31%), Postives = 96/130 (73.85%), Query Frame = 0
Query:  179 WGEGIPRLNTVFLTGYLGQDPKPKYFDSGKVVLNLSLAVKREYHPLERKAFGIVSGQEETDWFQLEMWNRDAEYAASICRKGARIGVQGSLAISEWTDRE-GNPRTTNKILVQNLELLDSKAEMAMRSDK 307
            W + + R NTV L+G +G +PK +YFD GKVV+NL+LAV+R+YHPLERK F I  GQEETDWF LE+W R AE+A+    KG R+ V GSL + +WTD+E G PR+  K++V+ L++++++AE  +R  K
Sbjct:   72 WDDTVARFNTVHLSGRIGAEPKTRYFDDGKVVVNLNLAVQRKYHPLERKHFNIAYGQEETDWFGLEIWGRTAEFASKYVDKGMRVSVIGSLQVDQWTDKESGEPRSRTKVVVRELDIMETRAEGDLRRSK 201          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig681.14728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMF5_ECTSI6.190e-8078.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAA6_9STRA1.060e-4859.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9W4H7_9STRA5.670e-4360.98Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2USN2_9STRA4.210e-4259.38Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2SIA7_9STRA7.810e-4260.80Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1DC37_CYCTE2.020e-4159.06Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1YYF7_TRICV4.860e-4159.35Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2UQ80_9STRA8.040e-4159.38Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1ZHN3_9STRA1.700e-4059.35Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1Z5KE78_FISSO2.520e-4052.31Single-strand DNA-binding protein n=2 Tax=Fistulif... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011344Single-stranded DNA-binding proteinTIGRFAMTIGR00621TIGR00621coord: 186..345
e-value: 7.3E-30
score: 102.4
IPR011344Single-stranded DNA-binding proteinPANTHERPTHR10302SINGLE-STRANDED DNA-BINDING PROTEINcoord: 186..337
IPR011344Single-stranded DNA-binding proteinHAMAPMF_00984SSBcoord: 186..299
score: 23.74
IPR000424Primosome PriB/single-strand DNA-bindingPFAMPF00436SSBcoord: 186..295
e-value: 1.7E-22
score: 79.4
IPR000424Primosome PriB/single-strand DNA-bindingPROSITEPS50935SSBcoord: 186..296
score: 26.279
NoneNo IPR availableGENE3D2.40.50.140coord: 184..304
e-value: 3.5E-28
score: 99.8
NoneNo IPR availablePANTHERPTHR10302:SF10SINGLE-STRANDED DNA-BINDING PROTEINcoord: 186..337
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 186..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig681contigH-paniculata_contig681:12426..32617 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig681.14728.1mRNA_H-paniculata_contig681.14728.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig681 12426..32617 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig681.14728.1 ID=prot_H-paniculata_contig681.14728.1|Name=mRNA_H-paniculata_contig681.14728.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=370bp
LAASARSFCTLYSFCIDPKLTPDGRNHMPCHSWCFCQRALLVASYILPLA
GSFCPYTSSASSRISSGTPSRQLATPNNVRGEYHPISQHARFDEMTLRRR
RARVTGDNWYQRQKTSVRTGLMSMTQQGWGESDDRGPINGEQRGYTPLPE
DERFPAPAPAPIPAPSSEWREPRKYDDGWGEGIPRLNTVFLTGYLGQDPK
PKYFDSGKVVLNLSLAVKREYHPLERKAFGIVSGQEETDWFQLEMWNRDA
EYAASICRKGARIGVQGSLAISEWTDREGNPRTTNKILVQNLELLDSKAE
MAMRSDKSDANLWESERLEKASAAAKMRNSQEDANPQDAAQQARKKEAED
KWWSAKPESEVGAGGVTSTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011344ssDNA-bd
IPR000424Primosome_PriB/ssb
IPR012340NA-bd_OB-fold