prot_H-paniculata_contig6793.14708.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6793.14708.1
Unique Nameprot_H-paniculata_contig6793.14708.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length406
Homology
BLAST of mRNA_H-paniculata_contig6793.14708.1 vs. uniprot
Match: D8LEX7_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX7_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 3.830e-58
Identity = 123/236 (52.12%), Postives = 149/236 (63.14%), Query Frame = 0
Query:    9 VPGGADGEDATGVPGERLEDRDSTEDMCAICLIDYEAGDPIRIIPGCRHQFHKDCIDPWLETKAVCAYCKAKVEVKKSICDRLFRSASDRMGIHLVTLQQDPTPHHFSSSRRTYTSQEVRQMIGGPHLPTAYRTQSDFDYVGSMVAPRTTEAADAAGGVGGAXXGEVVP---------------PAGAGTGAGAARSAVL---GAEPQGSIVVQPVSAPSFTVVPREFLLGSAGAD 226
            V  GA+G +  G        RDSTEDMCAICL++YE GD +RIIPGC H+FHK+CIDPWLETKAVCAYCKA VE +++ CDR++RS SDR+GI+LV     PT   FSSSRRTYT+++V Q+  GP LP +Y   S+ DYVGS VAPR     D   G GG                       PAG+G+      + VL   G +PQGSIVVQP SAPS+ VVPRE+ LG  G D
Sbjct:  176 VVAGAEGGEGEGA-------RDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRVYRSVSDRLGINLVA----PTTIRFSSSRRTYTNEDV-QLAMGPTLPASYG-HSEMDYVGSAVAPRQASV-DVEAGEGGEAEAXXXXXXXXXXXXXXFXXXXPAGSGSTRSTRGAIVLPDQGGQPQGSIVVQPASAPSYVVVPREYSLGGDGID 397          
BLAST of mRNA_H-paniculata_contig6793.14708.1 vs. uniprot
Match: A0A6H5KYP0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYP0_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 3.240e-54
Identity = 129/251 (51.39%), Postives = 152/251 (60.56%), Query Frame = 0
Query:    5 AGAFVPGGADGEDATGVP-----------------GERLEDRDSTEDMCAICLIDYEAGDPIRIIPGCRHQFHKDCIDPWLETKAVCAYCKAKVEVKKSICDRLFRSASDRMGIHLVTLQQDPTPHHFSSSRRTYTSQEVRQMIGGPHLPTAYRTQSDFDYVGSMVAPRTTEAADAAG-GVGGAXXGEVVPPAGAGT---GAGAARSA---------VL---GAEPQ-GSIVVQPVSAPSFTVVPREFLLG 221
            A A   GG  G D  G P                 GER   RDSTEDMCAICL++YE GD +RIIPGC H+FHK+CIDPWLETKAVCAYCKA VE +++ CDR++RS S+R+GI+LV     PT   FSSSRRTYT+++V Q+  GP LP +Y   S+ DYVGS VAPR       AG GV       +   A  G    G G ARS          VL   G +PQ GSIVVQP SAPS+ VVPRE+ LG
Sbjct:  341 AAAGEEGGVTGSDLHGAPAGRTGAPQTAVVLAAEGGEREGARDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRIYRSVSNRLGINLVA----PTTIRFSSSRRTYTNEDV-QLAMGPTLPASYG-HSEMDYVGSAVAPRQASVDVEAGEGVEAEATTPITADAAPGQAFGGGGPARSGSTRSTRGAIVLPDQGGQPQEGSIVVQPASAPSYVVVPREYSLG 585          
BLAST of mRNA_H-paniculata_contig6793.14708.1 vs. uniprot
Match: A0A835ZK41_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK41_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.170e-13
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0
Query:   35 MCAICLIDYEAGDPIRIIPGCRHQFHKDCIDPWLETKAVCAYCKAKV 81
            MCAICL D+E GD +R++P C HQ+HK C+DPWLETKA+C  CK +V
Sbjct:  250 MCAICLADFEGGDQLRVVPHCFHQYHKACLDPWLETKAICPLCKQRV 296          
BLAST of mRNA_H-paniculata_contig6793.14708.1 vs. uniprot
Match: A0A1E5WEF3_9POAL (RING-type E3 ubiquitin transferase n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5WEF3_9POAL)

HSP 1 Score: 77.0 bits (188), Expect = 5.080e-12
Identity = 43/122 (35.25%), Postives = 58/122 (47.54%), Query Frame = 0
Query:   12 GADGEDATGVPGERLEDRDSTEDMCAICLIDYEAGDPIRIIPGCRHQFHKDCIDPWLETKAVCAYCKAKVEVKKSICDRLFRSASDRMGIHLVTLQQDPTPHHFSSSRRTYTSQEVRQMIGG 133
            G   ED  G+P    + +      CA+CL  ++AGD  R +PGC H+FH  C+DPWL    VC  C+A+V V  S   +   +AS      LV+    P P     S R   S    +M GG
Sbjct:   54 GLSAEDLDGLPCHEHDSKAGAGGECAVCLEVFQAGDRCRALPGCEHEFHAQCVDPWLRKSRVCPVCRAEVVVVGS--GKAAAAASSENDTKLVSSSSLPGP--IRVSLRARASSLPNRMAGG 171          
BLAST of mRNA_H-paniculata_contig6793.14708.1 vs. uniprot
Match: UPI001F5CDF93 (E3 ubiquitin-protein ligase EL5-like n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5CDF93)

HSP 1 Score: 73.6 bits (179), Expect = 8.740e-12
Identity = 30/63 (47.62%), Postives = 41/63 (65.08%), Query Frame = 0
Query:   17 DATGVPGERLEDRDSTEDMCAICLIDYEAGDPIRIIPGCRHQFHKDCIDPWLETKAVCAYCKA 79
            D+TG   E  E  DST   CA+CL DYE G+ +R++PGCRH FH+ C+D WL  +  C  C++
Sbjct:   79 DSTGERSEEEEAADSTR--CAVCLADYEHGEELRLLPGCRHSFHRQCVDVWLRRRPSCPLCRS 139          
BLAST of mRNA_H-paniculata_contig6793.14708.1 vs. uniprot
Match: A0A8I6YB56_HORVV (RING-type domain-containing protein n=2 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6YB56_HORVV)

HSP 1 Score: 74.7 bits (182), Expect = 9.060e-12
Identity = 36/90 (40.00%), Postives = 52/90 (57.78%), Query Frame = 0
Query:   14 DGEDATGVPGERLEDRDSTEDMCAICLIDYEAGDPIRIIPGCRHQFHKDCIDPWLETKA-VCAYCKAKV-------EVKKSICDRLFRSA 95
            DG     V G+ L+  D  +D CA+CL +Y AGD +R++P CRH FH++C+D WL T+A  C  C+A V       + K+ +C    R A
Sbjct:  114 DGCPEAAVEGQGLQHADD-DDACAVCLAEYAAGDEVRVLPACRHGFHRECVDRWLLTRAPTCPVCRAPVAAHIDGADAKEEVCPTTTRHA 202          
BLAST of mRNA_H-paniculata_contig6793.14708.1 vs. uniprot
Match: A0A8B8LAX6_ABRPR (RING-H2 finger protein ATL70-like n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8LAX6_ABRPR)

HSP 1 Score: 73.2 bits (178), Expect = 1.120e-11
Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   25 RLEDRDSTEDMCAICLIDYEAGDPIRIIPGCRHQFHKDCIDPWLETKAVCAYCK 78
            +L+  DST   C+ICL DY+  D +R++PGCRHQFH  CIDPWL     C  C+
Sbjct:   94 KLQKSDSTATCCSICLADYKGTDMLRVLPGCRHQFHIKCIDPWLRLHPTCPVCR 147          
BLAST of mRNA_H-paniculata_contig6793.14708.1 vs. uniprot
Match: A0A6V7Q4V3_ANACO (RING-type domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7Q4V3_ANACO)

HSP 1 Score: 73.9 bits (180), Expect = 1.360e-11
Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 0
Query:   31 STEDMCAICLIDYEAGDPIRIIPGCRHQFHKDCIDPWL--ETKAVCAYCKAKVEVKKSICDRLFRSASD 97
            +  + CAICL D+ AG+ +R++P C+H FHKDCIDPWL  ++K+ C  C+  V V + + DR     SD
Sbjct:  104 NNSESCAICLEDFAAGEELRVLPRCKHAFHKDCIDPWLLAQSKSTCPLCRDPVVVTRPMSDRDLDRDSD 172          
BLAST of mRNA_H-paniculata_contig6793.14708.1 vs. uniprot
Match: A0A6P5GHC7_ANACO (RING-H2 finger protein ATL73-like n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GHC7_ANACO)

HSP 1 Score: 73.2 bits (178), Expect = 2.470e-11
Identity = 31/69 (44.93%), Postives = 44/69 (63.77%), Query Frame = 0
Query:   31 STEDMCAICLIDYEAGDPIRIIPGCRHQFHKDCIDPWL--ETKAVCAYCKAKVEVKKSICDRLFRSASD 97
            +  + CAICL D+ AG+ +R++P C+H FHKDCIDPWL   +K+ C  C+  V V + + DR     SD
Sbjct:  103 NNSESCAICLEDFAAGEELRVLPRCKHAFHKDCIDPWLLARSKSTCPLCRDPVVVTRPMSDRDLDRDSD 171          
BLAST of mRNA_H-paniculata_contig6793.14708.1 vs. uniprot
Match: A0A6P5GYY2_ANACO (RING-type E3 ubiquitin transferase n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GYY2_ANACO)

HSP 1 Score: 72.8 bits (177), Expect = 4.420e-11
Identity = 32/80 (40.00%), Postives = 49/80 (61.25%), Query Frame = 0
Query:   33 EDMCAICLIDYEAGDPIRIIPGCRHQFHKDCIDPWLETKAVCAYCK---AKVEVKKSICDRLFRSASDRMGIHLVTLQQD 109
            E  CAICL ++E G+P+R++PGC H FH  CID WL  ++ C  C+   +  E ++S CD + R  S+ +   LV L+ +
Sbjct:  140 EPECAICLTEFECGEPVRVLPGCDHAFHVKCIDRWLLARSSCPTCRQCMSGAENERSDCDEMNRLGSEPVRSVLVPLEPE 219          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6793.14708.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEX7_ECTSI3.830e-5852.12RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KYP0_9PHAE3.240e-5451.39RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835ZK41_9STRA2.170e-1363.83RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A1E5WEF3_9POAL5.080e-1235.25RING-type E3 ubiquitin transferase n=1 Tax=Dichant... [more]
UPI001F5CDF938.740e-1247.62E3 ubiquitin-protein ligase EL5-like n=2 Tax=Loliu... [more]
A0A8I6YB56_HORVV9.060e-1240.00RING-type domain-containing protein n=2 Tax=Hordeu... [more]
A0A8B8LAX6_ABRPR1.120e-1151.85RING-H2 finger protein ATL70-like n=1 Tax=Abrus pr... [more]
A0A6V7Q4V3_ANACO1.360e-1144.93RING-type domain-containing protein n=1 Tax=Ananas... [more]
A0A6P5GHC7_ANACO2.470e-1144.93RING-H2 finger protein ATL73-like n=2 Tax=Ananas c... [more]
A0A6P5GYY2_ANACO4.420e-1140.00RING-type E3 ubiquitin transferase n=1 Tax=Ananas ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 302..322
NoneNo IPR availablePANTHERPTHR45676FAMILY NOT NAMEDcoord: 30..107
NoneNo IPR availablePANTHERPTHR45676:SF74coord: 30..107
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 30..86
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 36..77
e-value: 4.9E-5
score: 32.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 34..78
e-value: 9.7E-11
score: 41.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 36..78
score: 10.276
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 22..85
e-value: 3.5E-17
score: 63.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6793contigH-paniculata_contig6793:1088..5986 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6793.14708.1mRNA_H-paniculata_contig6793.14708.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6793 1088..5986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6793.14708.1 ID=prot_H-paniculata_contig6793.14708.1|Name=mRNA_H-paniculata_contig6793.14708.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=406bp
ERGRAGAFVPGGADGEDATGVPGERLEDRDSTEDMCAICLIDYEAGDPIR
IIPGCRHQFHKDCIDPWLETKAVCAYCKAKVEVKKSICDRLFRSASDRMG
IHLVTLQQDPTPHHFSSSRRTYTSQEVRQMIGGPHLPTAYRTQSDFDYVG
SMVAPRTTEAADAAGGVGGAVGGEVVPPAGAGTGAGAARSAVLGAEPQGS
IVVQPVSAPSFTVVPREFLLGSAGADSANTSEVEAGASSTAGVLGGGTDS
AANSVVGAGGLIVGGGGVGYGIRVERVFSGRGDATMAKGGSDDSDGGVGE
EKKETEAREEKMEEAVEGMTGEEGGGGEETAQEKWAEGGAGVMMEEEGNG
GGDTGVTDGGVSQVSRPSAIASTEAMGVATPGGLAEQLAEGASVVDEEPR
VTGEEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD