prot_H-paniculata_contig67658.14673.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig67658.14673.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE) HSP 1 Score: 239 bits (609), Expect = 7.330e-70 Identity = 124/248 (50.00%), Postives = 164/248 (66.13%), Query Frame = 0
Query: 1 RLVVLVWGQVPGCDSGGMFAPVCRLQSTRMVLAIAAQYNLECWQLSYNTAFLNADVEEEVYVKMTPGYEEFGENRLLMVMRLLKSLYGLHQSLSNWWGIIDEHLAEIGFKSLKSDPRVYFYSESNAIVVLSPYVDDILLLGKDLKVLGRIKQKLVNHFSMTDMGDVSLVLGMGITRDCTKWTVTISQDNYTKSLLESYGMASCNPAYTPAMGKELSLDQPEEKLLNKDDKQRFRAIRASVRYLGEVAR 248
RLV W QVPG D G +APVCR QS RM+ IA Q+NLE Q+ +TAFL AD+ E V+V+ PG+E ++ +VM+L KSLYGL QS SNW+ ID L EIGF LKSD VY Y + V L+ YVDD+LL G + + + IK+KL F MTDMG+V LVLGM I RD + T+TISQ+ Y+KS+LE +GM+ C P TP G ELS QPE+ LL++++ +R++ I + Y+ +V R
Sbjct: 523 RLVAQGWNQVPGLDCGNTYAPVCRFQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIGFVPLKSDTCVYLYDHDDVQVYLTLYVDDLLLAGNNSRAISMIKKKLTQRFKMTDMGEVKLVLGMEIKRDRNQGTLTISQEAYSKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLSEEETRRYQGIVGCLIYIAQVLR 770
BLAST of mRNA_H-paniculata_contig67658.14673.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 230 bits (587), Expect = 1.390e-65 Identity = 119/248 (47.98%), Postives = 162/248 (65.32%), Query Frame = 0
Query: 1 RLVVLVWGQVPGCDSGGMFAPVCRLQSTRMVLAIAAQYNLECWQLSYNTAFLNADVEEEVYVKMTPGYEEFGENRLLMVMRLLKSLYGLHQSLSNWWGIIDEHLAEIGFKSLKSDPRVYFYSESNAIVVLSPYVDDILLLGKDLKVLGRIKQKLVNHFSMTDMGDVSLVLGMGITRDCTKWTVTISQDNYTKSLLESYGMASCNPAYTPAMGKELSLDQPEEKLLNKDDKQRFRAIRASVRYLGEVAR 248
R+V W QVPG D G +APVCR+QS RMV I ++NL Q+ +TAFL AD++EEV+V+ PG+E ++ MVM+L KSLYGL QS NW+ ID L EIGF +LKSDP VY Y + A + L+ YVDD+LL G D + +K KL F MTD+G+ SLVLGM I RD T+TISQ+ Y KS+LE +G++ P TP G E+S QPE+ LL++ + ++++ I S+ Y+ +V R
Sbjct: 1215 RVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLR 1462
BLAST of mRNA_H-paniculata_contig67658.14673.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE) HSP 1 Score: 224 bits (571), Expect = 1.960e-63 Identity = 117/244 (47.95%), Postives = 157/244 (64.34%), Query Frame = 0
Query: 1 RLVVLVWGQVPGCDSGGMFAPVCRLQSTRMVLAIAAQYNLECWQLSYNTAFLNADVEEEVYVKMTPGYEEFGENRLLMVMRLLKSLYGLHQSLSNWWGIIDEHLAEIGFKSLKSDPRVYFYSESNAIVVLSPYVDDILLLGKDLKVLGRIKQKLVNHFSMTDMGDVSLVLGMGITRDCTKWTVTISQDNYTKSLLESYGMASCNPAYTPAMGKELSLDQPEEKLLNKDDKQRFRAIRASVRYLG 244
R+V W QVPG D G +APVCR+QS RMV I ++NL Q+ +TAFL AD++EEV+V+ PG+E ++ MVM+L KSLYGL QS NW+ ID L EIGF +LKSDP VY Y + A + L+ YVDD+LL G D + +K KL F MTD+G+ SLVLGM I RD T+TISQ+ Y KS+LE +GM+ P TP G E+S QP+ LL++ + ++++ I S Y+
Sbjct: 1380 RVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPDYTLLDEKETRKYQGIVGSPMYIA 1623
BLAST of mRNA_H-paniculata_contig67658.14673.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE) HSP 1 Score: 218 bits (555), Expect = 3.330e-63 Identity = 119/261 (45.59%), Postives = 160/261 (61.30%), Query Frame = 0
Query: 1 RLVVLVWGQVPGCDSGGMFAPVCRLQSTRMVLAIAAQYNLECWQLSYNTAFLNADVEEEVYVKMTPGYEEFGENRLLMVMRLLKSLYGLHQSLSNWWGIIDEHLAEIGFKSLKSDPRVYFYSESNAIVVLSPYVDDILLLGKD-------------LKVLGRIKQKLVNHFSMTDMGDVSLVLGMGITRDCTKWTVTISQDNYTKSLLESYGMASCNPAYTPAMGKELSLDQPEEKLLNKDDKQRFRAIRASVRYLGEVAR 248
R+V W QVPG D G +APVCR+QS RMV I ++NL Q+ +TAFL AD++EEV+V+ PG+E ++ MVM+L KSLYGL QS NW+ ID L EIGF +LKSDP VY Y + A + L+ YVDD+LL G D L + R KL F MTD+G+ S LGM I RD T+TISQ+ Y KS+LE +GM+ P TP G E+S QPE+ LL++ + ++++ I S+ Y+ +V R
Sbjct: 194 RVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLR 454
BLAST of mRNA_H-paniculata_contig67658.14673.1 vs. uniprot
Match: A0A6H5KWT4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT4_9PHAE) HSP 1 Score: 209 bits (532), Expect = 1.520e-60 Identity = 116/248 (46.77%), Postives = 149/248 (60.08%), Query Frame = 0
Query: 1 RLVVLVWGQVPGCDSGGMFAPVCRLQSTRMVLAIAAQYNLECWQLSYNTAFLNADVEEEVYVKMTPGYEEFGENRLLMVMRLLKSLYGLHQSLSNWWGIIDEHLAEIGFKSLKSDPRVYFYSESNAIVVLSPYVDDILLLGKDLKVLGRIKQKLVNHFSMTDMGDVSLVLGMGITRDCTKWTVTISQDNYTKSLLESYGMASCNPAYTPAMGKELSLDQPEEKLLNKDDKQRFRAIRASVRYLGEVAR 248
RLVV W QVPG D G FAPVCRLQS RM+ A Q+NLE Q+ +TAFL AD+ E V+V+ PG+E ++ +VM+L KSLYGL QS SNW+ ID L EIGF LKSD +Y Y + V L+ YVDD+LL G + + IK+KL F+MTDMG V LVLGM I RD + E +GM+ C P TP G ELS QPE+ LL +++ R++ I + Y+ +V R
Sbjct: 114 RLVVQGWNQVPGLDYGSTFAPVCRLQSIRMLACTAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKNKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPLLVEIGFVPLKSDTCIYLYDHDDVQVYLTLYVDDLLLAGDNSNAISTIKKKLKQRFNMTDMGGVKLVLGMEIKRDRNQ---------------ERFGMSECKPTSTPGYGSELSKKQPEDTLLGEEETGRYQDIVGCLMYIAQVLR 346
BLAST of mRNA_H-paniculata_contig67658.14673.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE) HSP 1 Score: 194 bits (494), Expect = 3.590e-54 Identity = 107/252 (42.46%), Postives = 154/252 (61.11%), Query Frame = 0
Query: 1 RLVVLVWGQVPGCDSGGMFAPVCRLQSTRMVLAIAAQYNLECWQLSYNTAFLNADVEEEVYVKMTPGYEE----FGENRLLMVMRLLKSLYGLHQSLSNWWGIIDEHLAEIGFKSLKSDPRVYFYSESNAIVVLSPYVDDILLLGKDLKVLGRIKQKLVNHFSMTDMGDVSLVLGMGITRDCTKWTVTISQDNYTKSLLESYGMASCNPAYTPAMGKELSLDQPEEKLLNKDDKQRFRAIRASVRYLGEVAR 248
RLVV Q PG D G +APVCR+ S RM AI N +QL AFLNA + +VYV+ PG GE MV +L +SLYGL QS + W +DE L +G+K +SDP VY Y+ N IV+L+ YVDDIL+ G D +++ + K++L + F MTDMG+V +LG+ + RD + T+ ISQ++Y +LLE +GM NP TP G E+S +QP++++L DK+ ++++ S+ YL + R
Sbjct: 250 RLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEP---MVYKLERSLYGLSQSHALWNDTLDESLTVLGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTR 498
BLAST of mRNA_H-paniculata_contig67658.14673.1 vs. uniprot
Match: A0A6H5KL30_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL30_9PHAE) HSP 1 Score: 196 bits (499), Expect = 8.340e-54 Identity = 111/248 (44.76%), Postives = 150/248 (60.48%), Query Frame = 0
Query: 1 RLVVLVWGQVPGCDSGGMFAPVCRLQSTRMVLAIAAQYNLECWQLSYNTAFLNADVEEEVYVKMTPGYEEFGENRLLMVMRLLKSLYGLHQSLSNWWGIIDEHLAEIGFKSLKSDPRVYFYSESNAIVVLSPYVDDILLLGKDLKVLGRIKQKLVNHFSMTDMGDVSLVLGMGITRDCTKWTVTISQDNYTKSLLESYGMASCNPAYTPAMGKELSLDQPEEKLLNKDDKQRFRAIRASVRYLGEVAR 248
RLV W QVPG D G +AP C + ++L +Q+ +TAFL AD+ E V V+ PG+E G++ +VM+L KSLYGL QS SNW+ ID L EIGF L+SD VY Y + V L+ YVDD+LL G + V+ IK KL MTDMG+V LVLGM I RD + T+T SQ+ Y+KS+LE +GM+ P TP G ELS QPE+ LL +++ +R++ I + Y+ +V R
Sbjct: 835 RLVAQGWNQVPGLDCGSTYAPPCN-----------STWSL--FQMDLSTAFLCADILENVLVEQPPGFEVNGKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIGFVPLQSDTCVYLYDHDDVQVFLTLYVDDLLLAGNNANVMLMIKNKLKQRSKMTDMGEVKLVLGMEIKRDRNQGTLTTSQEAYSKSILERFGMSERKPTSTPGYGSELSNKQPEDTLLGEEETRRYQGIMGCLMYIAQVLR 1069
BLAST of mRNA_H-paniculata_contig67658.14673.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE) HSP 1 Score: 187 bits (476), Expect = 1.980e-53 Identity = 105/228 (46.05%), Postives = 146/228 (64.04%), Query Frame = 0
Query: 22 VCRLQSTRMVLAIAAQYNLECWQLSYNTAFLNADVEEEVYVKMTPGYE-EFGENRLLMVMRLLKSLYGLHQSLSNWWGIIDEHLAEIGFKSLKSDPRVYFYSESNAIVVLSPYVDDILLLGKDLKVLGRIKQKLVNHFSMTDMGDVSLVLGMGITRDCTKWTVTISQDNYTKSLLESYGMASCNPAYTPAMGKELSLDQPEEKLLNKDDKQRFRAIRASVRYLGEVAR 248
+ R S R V A ++NL Q+ +TAFL AD++EEV+V+ PG+E + E+ MVM+L KSLYGL QS NW+ ID + EIGF +LKSDP VY Y + A + L+ YVDD+LL G D + +K KL F MTD+G+ SLVLGM I RD T+TISQ+ Y KS+LE +GM+ P TP G E+S QPE+ LL++ + ++++ I S+ Y+ +V R
Sbjct: 7 IFRFYSLR-VGAPTVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKEDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVIVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLR 233
BLAST of mRNA_H-paniculata_contig67658.14673.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE) HSP 1 Score: 194 bits (492), Expect = 2.960e-53 Identity = 107/252 (42.46%), Postives = 153/252 (60.71%), Query Frame = 0
Query: 1 RLVVLVWGQVPGCDSGGMFAPVCRLQSTRMVLAIAAQYNLECWQLSYNTAFLNADVEEEVYVKMTPGYEE----FGENRLLMVMRLLKSLYGLHQSLSNWWGIIDEHLAEIGFKSLKSDPRVYFYSESNAIVVLSPYVDDILLLGKDLKVLGRIKQKLVNHFSMTDMGDVSLVLGMGITRDCTKWTVTISQDNYTKSLLESYGMASCNPAYTPAMGKELSLDQPEEKLLNKDDKQRFRAIRASVRYLGEVAR 248
RLVV Q PG D G +APVCR+ S RM AI N +QL AFLNA + +VYV+ PG GE MV +L +SLYGL QS + W +DE L G+K +SDP VY Y+ N IV+L+ YVDDIL+ G D +++ + K++L + F MTDMG+V +LG+ + RD + T+ ISQ++Y +LLE +GM NP TP G E+S +QP++++L DK+ ++++ S+ YL + R
Sbjct: 406 RLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEP---MVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTR 654
BLAST of mRNA_H-paniculata_contig67658.14673.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE) HSP 1 Score: 192 bits (489), Expect = 1.790e-52 Identity = 108/248 (43.55%), Postives = 143/248 (57.66%), Query Frame = 0
Query: 1 RLVVLVWGQVPGCDSGGMFAPVCRLQSTRMVLAIAAQYNLECWQLSYNTAFLNADVEEEVYVKMTPGYEEFGENRLLMVMRLLKSLYGLHQSLSNWWGIIDEHLAEIGFKSLKSDPRVYFYSESNAIVVLSPYVDDILLLGKDLKVLGRIKQKLVNHFSMTDMGDVSLVLGMGITRDCTKWTVTISQDNYTKSLLESYGMASCNPAYTPAMGKELSLDQPEEKLLNKDDKQRFRAIRASVRYLGEVAR 248
RLV W QVPG G +APVCRLQS RM+ IA Q+NLE Q+ TAFL D+ E V+V+ PG+E ++ +VM+L +SLYGL QS SNW+ ID L EIGF SLKSD VY F MT+MG+V LVLGM I +DC + T+TISQ+ Y+KS+LE +GM+ C P TP G ELS QPE+ LL++++ +R++ I + Y+ +V R
Sbjct: 699 RLVAQGWNQVPGLGCGSTYAPVCRLQSIRMLACIAVQFNLELDQIDVFTAFLYVDILENVFVEQPPGFEVKNKDGGDLVMQLQESLYGLAQSPSNWFHTIDPFLVEIGFVSLKSDTCVYL-------------------------------------FKMTNMGEVKLVLGMDIKKDCNRGTLTISQEAYSKSILERFGMSECKPISTPGYGSELSNKQPEDTLLDEEETRRYQGIVGCLMYIAQVLR 909 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig67658.14673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig67658.14673.1 ID=prot_H-paniculata_contig67658.14673.1|Name=mRNA_H-paniculata_contig67658.14673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=249bpback to top |