prot_H-paniculata_contig67436.14651.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig67436.14651.1
Unique Nameprot_H-paniculata_contig67436.14651.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length67
Homology
[Close]
BLAST of mRNA_H-paniculata_contig67436.14651.1 vs. uniprot
Match: UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 50.1 bits (118), Expect = 1.690e-6
Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 0 
Query:    1 QGKYDEAEALYGRAIAIDERVLGPEHLALAVSLNNLGSV 39
            QGKY+EAE LY RA+ I E VLGP+H ++A +LNNL  +
Sbjct:    4 QGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42
[Close]
BLAST of mRNA_H-paniculata_contig67436.14651.1 vs. uniprot
Match: A0A6H5K8Z8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z8_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 2.550e-6
Identity = 24/35 (68.57%), Postives = 29/35 (82.86%), Query Frame = 0 
Query:    1 QGKYDEAEALYGRAIAIDERVLGPEHLALAVSLNN 35
            QGKYD+AE LY R++AI E+VLGPEH  +A SLNN
Sbjct:   16 QGKYDDAEQLYERSLAIREKVLGPEHPDVAQSLNN 50
[Close]
BLAST of mRNA_H-paniculata_contig67436.14651.1 vs. uniprot
Match: D8LPW2_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPW2_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 4.280e-6
Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = 0 
Query:    1 QGKYDEAEALYGRAIAIDERVLGPEHLALAVSLNN 35
            QGKYDE + LY RAI I E+ LGP+H ALA SLNN
Sbjct:   50 QGKYDEGDPLYLRAIEIGEKTLGPDHPALATSLNN 84
[Close]
BLAST of mRNA_H-paniculata_contig67436.14651.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 5.990e-6
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 0 
Query:    1 QGKYDEAEALYGRAIAIDERVLGPEHLALAVSLNN 35
            QGKYDEAE LY R++AIDE+V GP+H  +A +LNN
Sbjct:  351 QGKYDEAEPLYKRSLAIDEKVYGPDHPDVATALNN 385
[Close]
BLAST of mRNA_H-paniculata_contig67436.14651.1 vs. uniprot
Match: D7G180_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G180_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 7.550e-6
Identity = 23/43 (53.49%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:    1 QGKYDEAEALYGRAIAIDERVLGPEHLALAVSLNNLGSVVKSQ 43
            QGKY+EAE L+ R++AIDE V GP+H  +A  L+NL  +++SQ
Sbjct:  154 QGKYEEAEPLHRRSLAIDEEVYGPDHPNVATGLSNLAGLLESQ 196
[Close]
BLAST of mRNA_H-paniculata_contig67436.14651.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 1.530e-5
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 0 
Query:    1 QGKYDEAEALYGRAIAIDERVLGPEHLALAVSLNN 35
            QGK+ EAE LYGR+ AI E+VLGPEH  +A SLNN
Sbjct:  434 QGKFTEAEPLYGRSQAIQEKVLGPEHPDVATSLNN 468
[Close]
BLAST of mRNA_H-paniculata_contig67436.14651.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 1.570e-5
Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 0 
Query:    1 QGKYDEAEALYGRAIAIDERVLGPEHLALAVSLNNLGSVVK 41
            QGKY EAE LY R++AI E+VLGPEH  +A SL+N  S+++
Sbjct:  693 QGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLE 733
[Close]
BLAST of mRNA_H-paniculata_contig67436.14651.1 vs. uniprot
Match: UPI0013D05A06 (tetratricopeptide repeat-containing protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D05A06)

HSP 1 Score: 50.1 bits (118), Expect = 1.710e-5
Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 0 
Query:    1 QGKYDEAEALYGRAIAIDERVLGPEHLALAVSLNNLGSV 39
            QGKY+EAE LY RA+ I E VLGP+H ++A +LNNL  +
Sbjct:    4 QGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42
[Close]
BLAST of mRNA_H-paniculata_contig67436.14651.1 vs. uniprot
Match: A0A0J9EWN6_9CYAN (Kinesin (Fragment) n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0J9EWN6_9CYAN)

HSP 1 Score: 50.1 bits (118), Expect = 1.980e-5
Identity = 25/43 (58.14%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:    1 QGKYDEAEALYGRAIAIDERVLGPEHLALAVSLNNLGSVVKSQ 43
            QG+Y+EAE LY R++AI E+VLG  H  +A+SLNNL S   SQ
Sbjct:   19 QGRYNEAEPLYQRSLAIREKVLGENHPDVALSLNNLASFYLSQ 61
[Close]
BLAST of mRNA_H-paniculata_contig67436.14651.1 vs. uniprot
Match: A7C642_9GAMM (TPR repeat protein n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7C642_9GAMM)

HSP 1 Score: 49.3 bits (116), Expect = 2.040e-5
Identity = 22/36 (61.11%), Postives = 28/36 (77.78%), Query Frame = 0 
Query:    1 QGKYDEAEALYGRAIAIDERVLGPEHLALAVSLNNL 36
            QG+YD+A+ LY RA+AIDE+V GP H  +A  LNNL
Sbjct:    8 QGEYDQAKPLYERALAIDEKVYGPNHPEVATDLNNL 43
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig67436.14651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
UPI0013D295281.690e-658.97tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
A0A6H5K8Z8_9PHAE2.550e-668.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPW2_ECTSI4.280e-668.57TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KIY6_9PHAE5.990e-665.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G180_ECTSI7.550e-653.49TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LJA6_9PHAE1.530e-568.57NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI1.570e-558.54NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
UPI0013D05A061.710e-558.97tetratricopeptide repeat-containing protein n=1 Ta... [more]
A0A0J9EWN6_9CYAN1.980e-558.14Kinesin (Fragment) n=1 Tax=Limnoraphis robusta CS-... [more]
A7C642_9GAMM2.040e-561.11TPR repeat protein n=1 Tax=Beggiatoa sp. PS TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 1..62
e-value: 1.4E-18
score: 67.0
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 1..67
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 1..67
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..67
e-value: 2.0E-23
score: 84.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..62
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 30..63
score: 8.496
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1..21
score: 5.251
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..63
score: 12.494

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig67436contigH-paniculata_contig67436:165..667 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig67436.14651.1mRNA_H-paniculata_contig67436.14651.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig67436 163..667 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig67436.14651.1 ID=prot_H-paniculata_contig67436.14651.1|Name=mRNA_H-paniculata_contig67436.14651.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp
QGKYDEAEALYGRAIAIDERVLGPEHLALAVSLNNLGSVVKSQGKYDEAE
ALFGRAFAIQEKVVGPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat
IPR013026TPR-contain_dom