prot_H-paniculata_contig674.14641.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig674.14641.1
Unique Nameprot_H-paniculata_contig674.14641.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length66
Homology
BLAST of mRNA_H-paniculata_contig674.14641.1 vs. uniprot
Match: A0A6H5KGH1_9PHAE (SSD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGH1_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 6.730e-18
Identity = 43/60 (71.67%), Postives = 51/60 (85.00%), Query Frame = 0
Query:    6 SDSYLEWETFRIIYKELVQGLGLCLAAVLVITLILIAHPGTAMLVFICVTMTIIDVLGVM 65
            S  Y +WETF+IIY+EL QGLGLCLA VLV+TL+LIAHP TA LVF+ VT TI+DVLG+M
Sbjct:  705 SGRYFQWETFQIIYQELYQGLGLCLAVVLVLTLVLIAHPATAGLVFLMVTFTIVDVLGIM 764          
BLAST of mRNA_H-paniculata_contig674.14641.1 vs. uniprot
Match: A0A7S1XPY4_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPY4_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.110e-16
Identity = 41/60 (68.33%), Postives = 50/60 (83.33%), Query Frame = 0
Query:    6 SDSYLEWETFRIIYKELVQGLGLCLAAVLVITLILIAHPGTAMLVFICVTMTIIDVLGVM 65
            S SYL WETF+IIY+EL+QG GL L AV +ITL+LIAHP  + LVF+CV MTI+D+LGVM
Sbjct:  729 SYSYLNWETFKIIYRELIQGTGLALLAVAIITLVLIAHPVASGLVFLCVAMTIVDILGVM 788          
BLAST of mRNA_H-paniculata_contig674.14641.1 vs. uniprot
Match: A0A7R9U284_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U284_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.770e-15
Identity = 40/60 (66.67%), Postives = 50/60 (83.33%), Query Frame = 0
Query:    6 SDSYLEWETFRIIYKELVQGLGLCLAAVLVITLILIAHPGTAMLVFICVTMTIIDVLGVM 65
            S +YL WET++IIY+EL+QG GL L AV +ITL+LIAHP T+ LVF+CV MTI D+LGVM
Sbjct:  262 SYAYLLWETYKIIYRELIQGTGLALMAVFIITLVLIAHPITSGLVFLCVGMTIADILGVM 321          
BLAST of mRNA_H-paniculata_contig674.14641.1 vs. uniprot
Match: A0A7S1L9T6_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1L9T6_ALECA)

HSP 1 Score: 76.3 bits (186), Expect = 2.000e-15
Identity = 38/55 (69.09%), Postives = 47/55 (85.45%), Query Frame = 0
Query:    9 YLEWETFRIIYKELVQGLGLCLAAVLVITLILIAHPGTAMLVFICVTMTIIDVLG 63
            +L WETFRII KE++  +GLCL AV VITL+LIAHP TA+LVF+CV MTI+D+LG
Sbjct:  102 FLTWETFRIIKKEMLLSVGLCLVAVFVITLLLIAHPLTALLVFLCVLMTIVDMLG 156          
BLAST of mRNA_H-paniculata_contig674.14641.1 vs. uniprot
Match: A0A7S1M6Y6_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1M6Y6_ALECA)

HSP 1 Score: 76.6 bits (187), Expect = 8.250e-15
Identity = 38/58 (65.52%), Postives = 48/58 (82.76%), Query Frame = 0
Query:    6 SDSYLEWETFRIIYKELVQGLGLCLAAVLVITLILIAHPGTAMLVFICVTMTIIDVLG 63
            S  +L WET+RII +E+   +GLCLAAV VITL+LIAHP TA+LVF+CV MTI+D+LG
Sbjct:  287 SREFLTWETYRIIKREMFLSVGLCLAAVFVITLVLIAHPLTALLVFLCVLMTIVDILG 344          
BLAST of mRNA_H-paniculata_contig674.14641.1 vs. uniprot
Match: A0A7S2SME8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SME8_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.980e-13
Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    9 YLEWETFRIIYKELVQGLGLCLAAVLVITLILIAHPGTAMLVFICVTMTIIDVLGVM 65
            +L WET++II +EL+  + LCLAAVLVIT +LI HPG + LVFICV MT++D+LG M
Sbjct:  530 FLAWETYKIIREELINNVSLCLAAVLVITTLLIGHPGCSGLVFICVAMTVVDILGCM 586          
BLAST of mRNA_H-paniculata_contig674.14641.1 vs. uniprot
Match: A0A813GG26_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GG26_POLGL)

HSP 1 Score: 69.7 bits (169), Expect = 2.390e-12
Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    9 YLEWETFRIIYKELVQGLGLCLAAVLVITLILIAHPGTAMLVFICVTMTIIDVLGVM 65
            +L WE FRII KEL+  +G+CLAAV  ITLIL+AHP TA LVF  V M I+DVLG M
Sbjct:  394 FLSWEVFRIIKKELLVNVGMCLAAVFFITLILLAHPWTAFLVFAIVVMVIVDVLGCM 450          
BLAST of mRNA_H-paniculata_contig674.14641.1 vs. uniprot
Match: A0A813INV5_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813INV5_POLGL)

HSP 1 Score: 69.7 bits (169), Expect = 2.410e-12
Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    9 YLEWETFRIIYKELVQGLGLCLAAVLVITLILIAHPGTAMLVFICVTMTIIDVLGVM 65
            +L WE FRII KEL+  +G+CLAAV  ITLIL+AHP TA LVF  V M I+DVLG M
Sbjct:  728 FLSWEVFRIIKKELLVNVGMCLAAVFFITLILLAHPWTAFLVFAIVVMVIVDVLGCM 784          
BLAST of mRNA_H-paniculata_contig674.14641.1 vs. uniprot
Match: A0A813M0I9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813M0I9_POLGL)

HSP 1 Score: 69.7 bits (169), Expect = 2.440e-12
Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    9 YLEWETFRIIYKELVQGLGLCLAAVLVITLILIAHPGTAMLVFICVTMTIIDVLGVM 65
            +L WE FRII KEL+  +G+CLAAV  ITLIL+AHP TA LVF  V M I+DVLG M
Sbjct: 3484 FLSWEVFRIIKKELLVNVGMCLAAVFFITLILLAHPWTAFLVFAIVVMVIVDVLGCM 3540          
BLAST of mRNA_H-paniculata_contig674.14641.1 vs. uniprot
Match: A0A7S2Y3B3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3B3_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 4.310e-12
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    8 SYLEWETFRIIYKELVQGLGLCLAAVLVITLILIAHPGTAMLVFICVTMTIIDVLGVM 65
            SY  WETF+II +EL QGL LCL AV ++ L+L+AHP  A LV +CV  T++D+LGVM
Sbjct:  241 SYFAWETFKIIQQELTQGLTLCLVAVFLLALLLLAHPLAAFLVVLCVCGTVVDILGVM 298          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig674.14641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGH1_9PHAE6.730e-1871.67SSD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S1XPY4_9STRA1.110e-1668.33Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U284_9STRA1.770e-1566.67Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1L9T6_ALECA2.000e-1569.09Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S1M6Y6_ALECA8.250e-1565.52Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S2SME8_9STRA1.980e-1361.40Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A813GG26_POLGL2.390e-1264.91Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A813INV5_POLGL2.410e-1264.91Hypothetical protein n=3 Tax=Polarella glacialis T... [more]
A0A813M0I9_POLGL2.440e-1264.91Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S2Y3B3_9STRA4.310e-1258.62Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10796PATCHED-RELATEDcoord: 3..65
NoneNo IPR availablePANTHERPTHR10796:SF130coord: 3..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..65
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..21
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 47..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig674contigH-paniculata_contig674:258..455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig674.14641.1mRNA_H-paniculata_contig674.14641.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig674 258..455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig674.14641.1 ID=prot_H-paniculata_contig674.14641.1|Name=mRNA_H-paniculata_contig674.14641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp
MTTCASDSYLEWETFRIIYKELVQGLGLCLAAVLVITLILIAHPGTAMLV
FICVTMTIIDVLGVM*
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