prot_H-paniculata_contig673.14633.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig673.14633.1
Unique Nameprot_H-paniculata_contig673.14633.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length304
Homology
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BLAST of mRNA_H-paniculata_contig673.14633.1 vs. uniprot
Match: D7G904_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G904_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 2.720e-64
Identity = 154/278 (55.40%), Postives = 180/278 (64.75%), Query Frame = 0 
Query:   22 MLSSPSAGGMRLA-----RGSPGV-RRAVSKPIRIIRSTSVPGQLQDKSQTSPAAPGMGGSSGGN--TRRAFHAHTDRGLQYELGLGAAGGGGYGGIAQSLPIPQAPLLAGSLPPPSRFDDLPPLSLGPQAKNESFSADCGSLSASFKASNIVKFATSCPANLGGNFGRPPGPKHNPSMSVLAEGELDEGEETGTDSDVPSPGPKSMTALSLLESLAKKNEMTTSPDKGAPDCDNDNESVES-SGDSSERLPIQDDVFELEELDEVHSRHHATKIIGA 290
            MLSSPSAGGMRLA     RGSPGV RR  S+PI IIRSTSVP QLQD++Q     P   G SGGN   RR  H   DR LQ++   GAAGG    GI QSLP PQAPLLAGSLPP    DDLPPLSLGPQA N SF +DCG+LS S KA+ +  +ATSCPAN+G +FGRPPG +   SMSVLAEG LDE EE   +    +   K +TALS+LESL++      +P         D ESVES +    ERLPI+DDVFEL+ L+ V+    A  +  A
Sbjct:    1 MLSSPSAGGMRLAGNYAHRGSPGVVRRTASRPISIIRSTSVPAQLQDRTQAGDPDPE--GGSGGNPANRRGLHTR-DRSLQHDFNSGAAGG--VNGIVQSLPPPQAPLLAGSLPPSRFLDDLPPLSLGPQADN-SFDSDCGALSTSLKANRL--YATSCPANIGAHFGRPPGSRLQ-SMSVLAEGSLDEEEEEAAEEGAEAS--KRITALSILESLSQ------TPAAPVDGSRVDAESVESLTNIVDERLPIEDDVFELDGLEGVNEELEALSLSEA 261
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig673.14633.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G904_ECTSI2.720e-6455.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig673contigH-paniculata_contig673:23544..32823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig673.14633.1mRNA_H-paniculata_contig673.14633.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig673 22197..33054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig673.14633.1 ID=prot_H-paniculata_contig673.14633.1|Name=mRNA_H-paniculata_contig673.14633.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=304bp
MDNNSGGSGEIGGEQSSQVSAMLSSPSAGGMRLARGSPGVRRAVSKPIRI
IRSTSVPGQLQDKSQTSPAAPGMGGSSGGNTRRAFHAHTDRGLQYELGLG
AAGGGGYGGIAQSLPIPQAPLLAGSLPPPSRFDDLPPLSLGPQAKNESFS
ADCGSLSASFKASNIVKFATSCPANLGGNFGRPPGPKHNPSMSVLAEGEL
DEGEETGTDSDVPSPGPKSMTALSLLESLAKKNEMTTSPDKGAPDCDNDN
ESVESSGDSSERLPIQDDVFELEELDEVHSRHHATKIIGAQLRAGWAIKE
KKE*
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