prot_H-paniculata_contig6722.14628.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6722.14628.1
Unique Nameprot_H-paniculata_contig6722.14628.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length183
Homology
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BLAST of mRNA_H-paniculata_contig6722.14628.1 vs. uniprot
Match: A0A6H5L4N8_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4N8_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 3.640e-58
Identity = 100/108 (92.59%), Postives = 105/108 (97.22%), Query Frame = 0 
Query:    1 MKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKIDRCYAWKSSPDGPARISLGKQDSGTISEFEDRAARIRT 108
            MKVDVKLPGML+IDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKIDRCYAWKS+PDGPAR+SL KQ+SGT +EFEDRA RIRT
Sbjct:  537 MKVDVKLPGMLIIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKIDRCYAWKSTPDGPARLSLDKQESGTTAEFEDRAMRIRT 644
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BLAST of mRNA_H-paniculata_contig6722.14628.1 vs. uniprot
Match: A0A836CHS5_9STRA (Tr-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHS5_9STRA)

HSP 1 Score: 178 bits (451), Expect = 2.010e-48
Identity = 85/105 (80.95%), Postives = 95/105 (90.48%), Query Frame = 0 
Query:    3 VDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKIDRCYAWKSSPDGPARISLGKQDSGTISEFEDRAARIR 107
            ++V+LPGMLVIDTPGHESFTNLRSRGSSLCDIAILV+DLMHGLEPQTIESLNLLRSKRTPFV+ALNKIDRCY WK++ DG +R+SL  QD  T  EFE RAAR+R
Sbjct:  486 LEVRLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVIDLMHGLEPQTIESLNLLRSKRTPFVVALNKIDRCYGWKATADGSSRLSLQGQDGATREEFETRAARVR 590
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BLAST of mRNA_H-paniculata_contig6722.14628.1 vs. uniprot
Match: I2CSG6_NANGC (Eukaryotic translation initiation factor 5B (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CSG6_NANGC)

HSP 1 Score: 172 bits (435), Expect = 2.810e-46
Identity = 81/104 (77.88%), Postives = 91/104 (87.50%), Query Frame = 0 
Query:    3 VDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKIDRCYAWKSSPDGPARISLGKQDSGTISEFEDRAARI 106
            +DVKLPG+L+IDTPGHESFTNLRSRGS+LCDIAILV+DLMHGLEPQTIESL LLR KRTPFV+ALNK+DRCYAWKS P+GP R SL  Q+  T  EF+DR  RI
Sbjct:  447 LDVKLPGLLIIDTPGHESFTNLRSRGSTLCDIAILVIDLMHGLEPQTIESLQLLRRKRTPFVVALNKVDRCYAWKSIPNGPFRASLDAQEENTRREFQDRTDRI 550
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BLAST of mRNA_H-paniculata_contig6722.14628.1 vs. uniprot
Match: A0A0L0SWW4_ALLM3 (Eukaryotic translation initiation factor 5B n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SWW4_ALLM3)

HSP 1 Score: 160 bits (404), Expect = 6.650e-46
Identity = 73/107 (68.22%), Postives = 90/107 (84.11%), Query Frame = 0 
Query:    1 MKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKIDRCYAWKSSPDGPARISLGKQDSGTISEFEDRAARIR 107
            ++VD+K+PG+L+IDTPGHESFTNLRSRGSSLC+IAILV+D+MHGLEPQTIESLNLLR ++TPF++ALNKIDR Y W +SPDG  + SL KQ      EFE+R  R +
Sbjct:    4 VEVDIKVPGLLIIDTPGHESFTNLRSRGSSLCNIAILVIDIMHGLEPQTIESLNLLRQRKTPFIVALNKIDRIYGWNASPDGAFQDSLAKQSKAVHKEFEERLNRTK 110
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BLAST of mRNA_H-paniculata_contig6722.14628.1 vs. uniprot
Match: A0A1E7FX92_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FX92_9STRA)

HSP 1 Score: 166 bits (419), Expect = 7.550e-45
Identity = 76/101 (75.25%), Postives = 89/101 (88.12%), Query Frame = 0 
Query:    4 DVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKIDRCYAWKSSPDGPARISLGKQDSGTISEFEDRAA 104
            D+K+PGMLVIDTPGHESF NLRSRGSSLCD+AILV+D+MHGLEPQTIESLN+LR K+ PFV+ALNKIDRCYAWK+  D P R +L +Q+ GTISEF  R+A
Sbjct:   92 DIKIPGMLVIDTPGHESFANLRSRGSSLCDVAILVIDMMHGLEPQTIESLNMLREKKVPFVVALNKIDRCYAWKTCKDTPIRDALKEQEEGTISEFRSRSA 192
[Close]
BLAST of mRNA_H-paniculata_contig6722.14628.1 vs. uniprot
Match: K3WAS5_GLOUD (Eukaryotic translation initiation factor 5B n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAS5_GLOUD)

HSP 1 Score: 166 bits (420), Expect = 2.950e-44
Identity = 78/106 (73.58%), Postives = 90/106 (84.91%), Query Frame = 0 
Query:    1 MKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKIDRCYAWKSSPDGPARISLGKQDSGTISEFEDRAARI 106
            MK+D KLPG+LVIDTPGHESFTNLRSRGSSLCDIAILVVD+MHGLEPQT+ESL LLR K+ PFV+ALNKIDRCY WK+ PD P + +L  Q+   + EFEDR A+I
Sbjct:  433 MKLDYKLPGLLVIDTPGHESFTNLRSRGSSLCDIAILVVDIMHGLEPQTLESLRLLRQKKAPFVVALNKIDRCYGWKTMPDMPVQEALKHQNEHVLREFEDRTAKI 538
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BLAST of mRNA_H-paniculata_contig6722.14628.1 vs. uniprot
Match: A0A5D6XPT0_9STRA (Eukaryotic translation initiation factor 5B n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPT0_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.990e-44
Identity = 79/106 (74.53%), Postives = 91/106 (85.85%), Query Frame = 0 
Query:    1 MKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKIDRCYAWKSSPDGPARISLGKQDSGTISEFEDRAARI 106
            MK++ KLPG+LVIDTPGHESFTNLRSRGSSLCDIAILVVD+MHGLEPQT+ESL LLR K+ PFV+ALNKIDRCY WK+ PD P + +L  Q+   I EFEDRAA+I
Sbjct:  447 MKLEYKLPGLLVIDTPGHESFTNLRSRGSSLCDIAILVVDIMHGLEPQTLESLRLLRQKKAPFVVALNKIDRCYGWKTMPDLPIQEALKHQNEHVIREFEDRAAKI 552
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BLAST of mRNA_H-paniculata_contig6722.14628.1 vs. uniprot
Match: A0A418BA32_9STRA (Tr-type G domain-containing protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A418BA32_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.030e-43
Identity = 78/107 (72.90%), Postives = 92/107 (85.98%), Query Frame = 0 
Query:    1 MKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKIDRCYAWKSSPDGPARISLGKQDSGTISEFEDRAARIR 107
            MK+D KLPG+LVIDTPGHESFTNLRSRGSSLCDIAILVVD+MHGLEPQT+ES+ LLR+KR PFV+ALNKIDRCY+WK+ PD P   +  +Q+     EFEDRAA+I+
Sbjct:  440 MKLDFKLPGLLVIDTPGHESFTNLRSRGSSLCDIAILVVDIMHGLEPQTLESIRLLRAKRAPFVVALNKIDRCYSWKTCPDMPFLDAFQQQNEHVQREFEDRAAQIK 546
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BLAST of mRNA_H-paniculata_contig6722.14628.1 vs. uniprot
Match: A0A7R9WHP7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WHP7_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.230e-43
Identity = 76/101 (75.25%), Postives = 87/101 (86.14%), Query Frame = 0 
Query:    2 KVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKIDRCYAWKSSPDGPARISLGKQDSGTISEFEDR 102
            K D+ +PGMLVIDTPGHESFTNLRSRGSSLCD+AILVVDLMHGLE QTIESLN+LR + TPFV+ALNK+DRCYAWK+ PD P R +L +Q  GT+SEF  R
Sbjct:  244 KFDITVPGMLVIDTPGHESFTNLRSRGSSLCDVAILVVDLMHGLEQQTIESLNMLRGRNTPFVVALNKVDRCYAWKTCPDTPIRDALKEQPEGTVSEFRSR 344
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BLAST of mRNA_H-paniculata_contig6722.14628.1 vs. uniprot
Match: A0A067C6G7_SAPPC (Tr-type G domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C6G7_SAPPC)

HSP 1 Score: 164 bits (414), Expect = 1.890e-43
Identity = 82/118 (69.49%), Postives = 94/118 (79.66%), Query Frame = 0 
Query:    6 KLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKIDRCYAWKSSPDGPARISLGKQDSGTISEFEDRAARIRTGEGDGEGAEHGIVLE 123
            KLPG+LVIDTPGHESFTNLRSRGSSLCDIAILVVD+MHGLEPQT+ESL LLR+KR PFV+ALNKIDRCY+WK+ PD P R +L  Q+   + EFEDRA +I       E AE G+  E
Sbjct:  425 KLPGLLVIDTPGHESFTNLRSRGSSLCDIAILVVDIMHGLEPQTLESLRLLRAKRAPFVVALNKIDRCYSWKTCPDMPIRDALALQNEHVVREFEDRAKKIMV-----EFAEQGLNAE 537
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6722.14628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4N8_9PHAE3.640e-5892.59Tr-type G domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CHS5_9STRA2.010e-4880.95Tr-type G domain-containing protein n=1 Tax=Tribon... [more]
I2CSG6_NANGC2.810e-4677.88Eukaryotic translation initiation factor 5B (Fragm... [more]
A0A0L0SWW4_ALLM36.650e-4668.22Eukaryotic translation initiation factor 5B n=1 Ta... [more]
A0A1E7FX92_9STRA7.550e-4575.25p-loop containing nucleoside triphosphate hydrolas... [more]
K3WAS5_GLOUD2.950e-4473.58Eukaryotic translation initiation factor 5B n=1 Ta... [more]
A0A5D6XPT0_9STRA2.990e-4474.53Eukaryotic translation initiation factor 5B n=1 Ta... [more]
A0A418BA32_9STRA1.030e-4372.90Tr-type G domain-containing protein n=6 Tax=Aphano... [more]
A0A7R9WHP7_9STRA1.230e-4375.25Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A067C6G7_SAPPC1.890e-4369.49Tr-type G domain-containing protein n=4 Tax=Saprol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000795Transcription factor, GTP-binding domainPRINTSPR00315ELONGATNFCTcoord: 63..72
score: 42.06
coord: 11..21
score: 52.24
coord: 27..38
score: 45.57
IPR000795Transcription factor, GTP-binding domainPFAMPF00009GTP_EFTUcoord: 10..75
e-value: 3.6E-21
score: 75.6
IPR000795Transcription factor, GTP-binding domainPROSITEPS51722G_TR_2coord: 1..182
score: 27.42
NoneNo IPR availableGENE3D3.40.50.300coord: 1..121
e-value: 2.5E-30
score: 107.7
NoneNo IPR availablePANTHERPTHR43381:SF4EUKARYOTIC TRANSLATION INITIATION FACTOR 5Bcoord: 2..107
IPR015760Translation initiation factor IF- 2PANTHERPTHR43381FAMILY NOT NAMEDcoord: 2..107
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6722contigH-paniculata_contig6722:982..3618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6722.14628.1mRNA_H-paniculata_contig6722.14628.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6722 949..3959 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6722.14628.1 ID=prot_H-paniculata_contig6722.14628.1|Name=mRNA_H-paniculata_contig6722.14628.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=183bp
MKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTI
ESLNLLRSKRTPFVIALNKIDRCYAWKSSPDGPARISLGKQDSGTISEFE
DRAARIRTGEGDGEGAEHGIVLEERRPHPHDFHGADVSHYRGGYSRLASL
ALCVSLSMLSAGATDGEDYVYARLAGVYRAGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000795TF_GTP-bd_dom
IPR015760TIF_IF2
IPR027417P-loop_NTPase