prot_H-paniculata_contig6688.14579.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6688.14579.1
Unique Nameprot_H-paniculata_contig6688.14579.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length236
Homology
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BLAST of mRNA_H-paniculata_contig6688.14579.1 vs. uniprot
Match: A0A6H5J7V5_9PHAE (VHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7V5_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 2.250e-41
Identity = 96/189 (50.79%), Postives = 126/189 (66.67%), Query Frame = 0 
Query:    1 VSDKEILATTASCTEMLDQVLKAAESREEVGESDITSEIVDQLKGVAPKLTGIIEAHGEGDPVMIEGLFKAMEAADDVLRLYKDVVAGVTAVPILPPSRFSGNMGSLTGEMATMTMEQAAAAKGAAAKLRAKTKTVPTLARPPGHTKNASASSPFSDKNANNKNKPASEPSSTVDLLSGFELEGTRLSN 189
            VSD+EI+AT ASC+EML+QVL+AAESR EV +SDIT+E+V+QLK   PK++GIIEA+GEGD  M+E LFK  +A D  LRLY+DVV GV +VP+LPPS +S N+G+++G M  +++ Q A A+ AA+KL+ KT  VPTL+                                TVDLLSGFEL+G   SN
Sbjct:  244 VSDREIVATGASCSEMLEQVLQAAESRAEVRDSDITAEVVEQLKQTGPKISGIIEANGEGDAAMLEALFKVNDAVDSTLRLYQDVVDGVKSVPLLPPSSYSSNIGAISGRMEGLSIGQVAGARAAASKLK-KTAAVPTLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-TVDLLSGFELDGASNSN 430
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6688.14579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J7V5_9PHAE2.250e-4150.79VHS domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY89009GAT-like domaincoord: 8..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6688contigH-paniculata_contig6688:7567..11561 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6688.14579.1mRNA_H-paniculata_contig6688.14579.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6688 7567..11561 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6688.14579.1 ID=prot_H-paniculata_contig6688.14579.1|Name=mRNA_H-paniculata_contig6688.14579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
VSDKEILATTASCTEMLDQVLKAAESREEVGESDITSEIVDQLKGVAPKL
TGIIEAHGEGDPVMIEGLFKAMEAADDVLRLYKDVVAGVTAVPILPPSRF
SGNMGSLTGEMATMTMEQAAAAKGAAAKLRAKTKTVPTLARPPGHTKNAS
ASSPFSDKNANNKNKPASEPSSTVDLLSGFELEGTRLSNRGSTTDKGGGG
AAGASGSSSVGDLFAGFVAPGGGAVGTGAGCVDAKQ
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