prot_H-paniculata_contig6643.14521.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6643.14521.1
Unique Nameprot_H-paniculata_contig6643.14521.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length456
Homology
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BLAST of mRNA_H-paniculata_contig6643.14521.1 vs. uniprot
Match: A0A6H5JIA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA0_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 8.290e-17
Identity = 56/94 (59.57%), Postives = 69/94 (73.40%), Query Frame = 0 
Query:    7 SRRLDSLEASIVPEETTQSNKEEEEAVKRLQRSARCVSQALPGIVSARGRRKALQAYFAESDEQIGSSGTGKIVDVAARALLVEGLAHLAGTVQ 100
            SRR+D LE +  P ET    ++++EAVK L RSARC+SQALPGI SAR RR+AL  YF ESDE+ G  G G  +D AARAL++EGLA LAG V+
Sbjct:   68 SRRIDKLEENTAPPET----EKQDEAVKELTRSARCLSQALPGIASARTRRRALHGYFRESDEKRG--GYGDRIDPAARALVIEGLACLAGKVR 155
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BLAST of mRNA_H-paniculata_contig6643.14521.1 vs. uniprot
Match: D8LDJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ2_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 2.720e-15
Identity = 54/94 (57.45%), Postives = 67/94 (71.28%), Query Frame = 0 
Query:    7 SRRLDSLEASIVPEETTQSNKEEEEAVKRLQRSARCVSQALPGIVSARGRRKALQAYFAESDEQIGSSGTGKIVDVAARALLVEGLAHLAGTVQ 100
            SRR+D LE +  P +T    ++++EAVK L RSARC+SQALPGI SAR RR+AL  YF E DE+ G  G G   D AARAL++EGLA LAG V+
Sbjct:   68 SRRIDKLEENTAPPDT----EKQDEAVKELARSARCLSQALPGIASARTRRRALHGYFREGDEKRG--GYGDRNDPAARALVIEGLACLAGKVR 155
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6643.14521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JIA0_9PHAE8.290e-1759.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDJ2_ECTSI2.720e-1557.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6643contigH-paniculata_contig6643:3738..6994 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6643.14521.1mRNA_H-paniculata_contig6643.14521.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6643 3738..6994 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6643.14521.1 ID=prot_H-paniculata_contig6643.14521.1|Name=mRNA_H-paniculata_contig6643.14521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=456bp
MLCAWNSRRLDSLEASIVPEETTQSNKEEEEAVKRLQRSARCVSQALPGI
VSARGRRKALQAYFAESDEQIGSSGTGKIVDVAARALLVEGLAHLAGTVQ
RQETPWAVVTSTCGGIGEESVNRSAPGAHDRFTSAGQNPPDAGIFNPLSV
NSLEQHSPKGDATQHPTTPDCENASDQAEGQQSGKSSRLDSCPTEREEVN
PSLNASDTDPSSHPMAERRATPAEKESMASIAGWRPPLESSADSIERKPI
DNANENPPEGIPTVPNATKIPPVHGSIPHEDKELLSPLILNATSVAVEAE
NIGGSESYQEERPPAQEREGQPRRVGEERAVGGSGECSSVRERNRSSSPA
SSFSSSSPPRCSHSRGPDLPLSSLLPSSLHRHHTDASDQKEADESSLSPL
RQPPPPPPPPPPPPSRQTSVLVAFDEDGNSNTCRNTLILSRLFTGGREGG
VAGQVG
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