prot_H-paniculata_contig66399.14516.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig66399.14516.1
Unique Nameprot_H-paniculata_contig66399.14516.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length111
Homology
[Close]
BLAST of mRNA_H-paniculata_contig66399.14516.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 1.290e-65
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0 
Query:    2 TRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 109
            TRSAKAGLQFPVGR+GRFLK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VKK
Sbjct:   15 TRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_H-paniculata_contig66399.14516.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 4.340e-64
Identity = 103/107 (96.26%), Postives = 106/107 (99.07%), Query Frame = 0 
Query:    2 TRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 108
            TRSAKAGLQFPVGR+GRFLK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VK
Sbjct:   60 TRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_H-paniculata_contig66399.14516.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 8.910e-61
Identity = 96/104 (92.31%), Postives = 102/104 (98.08%), Query Frame = 0 
Query:    2 TRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 105
            +RSAKAGLQFPVGRIGRF+KQGKY+SRVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:   15 SRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_H-paniculata_contig66399.14516.1 vs. uniprot
Match: A0A7S3K2Q9_9STRA (Histone H2A n=4 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2Q9_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.160e-60
Identity = 96/104 (92.31%), Postives = 102/104 (98.08%), Query Frame = 0 
Query:    2 TRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 105
            T+SAKAGLQFPVGRIGRFLKQGKYA+RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRH+QLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK
Sbjct:   21 TKSAKAGLQFPVGRIGRFLKQGKYATRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGSVTIASGGVLPNIHAVLLPKK 124
[Close]
BLAST of mRNA_H-paniculata_contig66399.14516.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 3.010e-60
Identity = 96/104 (92.31%), Postives = 103/104 (99.04%), Query Frame = 0 
Query:    2 TRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 105
            ++S+KAGLQFPV RIGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   15 SKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_H-paniculata_contig66399.14516.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.500e-59
Identity = 96/104 (92.31%), Postives = 103/104 (99.04%), Query Frame = 0 
Query:    2 TRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 105
            ++S+KAGLQFPV RIGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   66 SKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 169
[Close]
BLAST of mRNA_H-paniculata_contig66399.14516.1 vs. uniprot
Match: A0A061QUG5_9CHLO (Histone H2A n=4 Tax=core chlorophytes TaxID=2692248 RepID=A0A061QUG5_9CHLO)

HSP 1 Score: 187 bits (476), Expect = 1.680e-59
Identity = 95/109 (87.16%), Postives = 105/109 (96.33%), Query Frame = 0 
Query:    1 MTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 109
            ++RSAKAGLQFPVGR+ R+LK+GKYA+R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG+VTIASGGVLPNIH+VLLPKK  KK
Sbjct:   16 VSRSAKAGLQFPVGRVARYLKKGKYATRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIASGGVLPNIHSVLLPKKSDKK 124
[Close]
BLAST of mRNA_H-paniculata_contig66399.14516.1 vs. uniprot
Match: H2A_CHLRE (Histone H2A n=45 Tax=Chlamydomonadales TaxID=3042 RepID=H2A_CHLRE)

HSP 1 Score: 187 bits (474), Expect = 2.890e-59
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0 
Query:    1 MTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 105
            ++RSAKAGLQFPVGRI R+LK+GKYA R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLA+RNDEEL KLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   15 VSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGEVTIASGGVLPNIHAVLLPKK 119
[Close]
BLAST of mRNA_H-paniculata_contig66399.14516.1 vs. uniprot
Match: A8HWM8_CHLRE (Histone H2A n=17 Tax=Chlamydomonadales TaxID=3042 RepID=A8HWM8_CHLRE)

HSP 1 Score: 187 bits (474), Expect = 3.190e-59
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0 
Query:    1 MTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 105
            ++RSAKAGLQFPVGRI R+LK+GKYA R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLA+RNDEEL KLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   15 VSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGEVTIASGGVLPNIHAVLLPKK 119
[Close]
BLAST of mRNA_H-paniculata_contig66399.14516.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 186 bits (472), Expect = 8.320e-59
Identity = 92/110 (83.64%), Postives = 105/110 (95.45%), Query Frame = 0 
Query:    1 MTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKKA 110
            +++SAKAGLQFPVGR+GRFLKQG+YA RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK   K+
Sbjct:   17 VSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSKS 126
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig66399.14516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI1.290e-6596.30Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI4.340e-6496.26Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LLP0_ECTSI8.910e-6192.31Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A7S3K2Q9_9STRA1.160e-6092.31Histone H2A n=4 Tax=Aureoumbra lagunensis TaxID=44... [more]
A0A6H5KG79_9PHAE3.010e-6092.31Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI1.500e-5992.31Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A061QUG5_9CHLO1.680e-5987.16Histone H2A n=4 Tax=core chlorophytes TaxID=269224... [more]
H2A_CHLRE2.890e-5990.48Histone H2A n=45 Tax=Chlamydomonadales TaxID=3042 ... [more]
A8HWM8_CHLRE3.190e-5990.48Histone H2A n=17 Tax=Chlamydomonadales TaxID=3042 ... [more]
A0A835ZLE9_9STRA8.320e-5983.64Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 57..71
score: 74.98
coord: 85..103
score: 76.04
coord: 28..43
score: 90.36
coord: 43..56
score: 90.54
IPR002119Histone H2ASMARTSM00414h2a4coord: 1..108
e-value: 3.1E-70
score: 249.3
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 3..74
e-value: 9.9E-15
score: 55.1
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 77..110
e-value: 5.4E-19
score: 67.6
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..110
e-value: 3.9E-59
score: 200.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..105
NoneNo IPR availablePANTHERPTHR23430:SF251coord: 2..110
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 2..110
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 7..13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig66399contigH-paniculata_contig66399:22..354 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig66399.14516.1mRNA_H-paniculata_contig66399.14516.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig66399 4..354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig66399.14516.1 ID=prot_H-paniculata_contig66399.14516.1|Name=mRNA_H-paniculata_contig66399.14516.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp
MTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLE
LAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAV
LLPKKVVKKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR032458Histone_H2A_CS