prot_H-paniculata_contig6615.14489.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6615.14489.1
Unique Nameprot_H-paniculata_contig6615.14489.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length121
Homology
BLAST of mRNA_H-paniculata_contig6615.14489.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 8.530e-22
Identity = 48/115 (41.74%), Postives = 73/115 (63.48%), Query Frame = 0
Query:    1 MGAPRVKRRNIPSLWLTHRKNRVDFILDQAVRNRITFRSGFQTIHIDEAWFCLIRERNRVCMFPGEERVGFTKVWHKSHIPKVTFVGAVSRPDPCRNFDGKIRIWRVCVNKEAQR 115
            +GA +   R  PSL    +++R+DFI D+       +      +H+DE+WF L+RE+ +V +F GE+  G  +V H+SH+PK+  + A +RPDP  +FDGKI IWR+CV + AQR
Sbjct:  112 LGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQR 226          
BLAST of mRNA_H-paniculata_contig6615.14489.1 vs. uniprot
Match: A0A1R3I5M9_9ROSI (Uncharacterized protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3I5M9_9ROSI)

HSP 1 Score: 63.2 bits (152), Expect = 3.580e-9
Identity = 42/111 (37.84%), Postives = 58/111 (52.25%), Query Frame = 0
Query:   12 PSLWLTHRKNRVDFILDQAVRNRITFRSGFQTIHIDEAWFCLIRERNRVCMFPGEERVGFTKVWHKSHIPKVTFVGAVSRP--DPCRN--FDGKIRIWRVCVNKEAQRKIV 118
            P+L   ++  R+ F L     N  TF+  + TIHIDE WF LIR+     + P EE    T    K+ IPKV F+ AV+RP  D   N  F GKI ++ +   + A+R  V
Sbjct:  141 PNLTFENKIARLRFCLKMLESNDSTFKGMYDTIHIDEKWFYLIRKSVNYYLLPDEEEPHRT-CKSKNFIPKVMFLAAVARPRFDTAGNVLFSGKIGVFPLVTKEPAKRSSV 250          
BLAST of mRNA_H-paniculata_contig6615.14489.1 vs. uniprot
Match: A0A484N8H9_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484N8H9_9ASTE)

HSP 1 Score: 54.3 bits (129), Expect = 4.570e-6
Identity = 33/97 (34.02%), Postives = 49/97 (50.52%), Query Frame = 0
Query:   23 VDFILDQAVRNRITFRSGFQTIHIDEAWFCLIRERNRVCMFPGEERVGFTKVWHKSHIPKVTFVGAVSRP----DPCRNFDGKIRIWRVCVNKEAQR 115
            ++ I+  ++    TF   +  IHIDE WF + +E+      P E    +     KSHIPK+ F+ AVSRP    D    +DGKI I+      +A+R
Sbjct:  189 LEHIVAPSIPMNPTFHHFYDYIHIDEKWFNITKEKTTFYALPDEPDP-YRTAQSKSHIPKIMFLAAVSRPRFGNDGAVVWDGKIGIFPFTYEAQAKR 284          
BLAST of mRNA_H-paniculata_contig6615.14489.1 vs. uniprot
Match: A0A5D6XR23_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR23_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 3.890e-5
Identity = 28/69 (40.58%), Postives = 39/69 (56.52%), Query Frame = 0
Query:   41 FQTIHIDEAWFCLIRERNRVCMFPGEERVGFTKVWHKSHIPKVTFVGAVSRP--DPCR--NFDGKIRIW 105
            F  +HIDE WF + + + RV + P E         HKSH+PK+ F+ A++RP  DP    +FD  I IW
Sbjct:   25 FDRVHIDEKWFVVNKTKRRVYLTPTEPNPQ-RHAQHKSHLPKLMFLCAITRPRVDPATGASFDRGIGIW 92          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6615.14489.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE8.530e-2241.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1R3I5M9_9ROSI3.580e-937.84Uncharacterized protein n=1 Tax=Corchorus olitoriu... [more]
A0A484N8H9_9ASTE4.570e-634.02Uncharacterized protein n=1 Tax=Cuscuta campestris... [more]
A0A5D6XR23_9STRA3.890e-540.58Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47169FAMILY NOT NAMEDcoord: 11..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6615contigH-paniculata_contig6615:10508..10870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6615.14489.1mRNA_H-paniculata_contig6615.14489.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6615 10104..11614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6615.14489.1 ID=prot_H-paniculata_contig6615.14489.1|Name=mRNA_H-paniculata_contig6615.14489.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp
MGAPRVKRRNIPSLWLTHRKNRVDFILDQAVRNRITFRSGFQTIHIDEAW
FCLIRERNRVCMFPGEERVGFTKVWHKSHIPKVTFVGAVSRPDPCRNFDG
KIRIWRVCVNKEAQRKIVPA*
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