prot_H-paniculata_contig6611.14485.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6611.14485.1
Unique Nameprot_H-paniculata_contig6611.14485.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length428
Homology
BLAST of mRNA_H-paniculata_contig6611.14485.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 6.510e-15
Identity = 60/171 (35.09%), Postives = 81/171 (47.37%), Query Frame = 0
Query:   22 SGRSLCLEAIAIVLHEACSGRTVSVSTKTLQLVSSHFCEVCRRVSTLRVKVGKDTPRALWAAPDDRHLATSV-----TRVPLLRARAVTW-MTCAAAEFMTGENDVLVNVEFVEFGPEFNRSL-EGVVWPEGVKTIRFGSGAYDNTAKFNQPIKRVRWPELLEQLVFGRDF 185
            +G S CL+A+ I L++A  G   + ST  LQL S   C  CR +  L++ V   TP  LW          SV     TRVP++RAR VTW +   A   MTG  D    V     GP F+  L  G+ WPE +  +  G G       FN+ ++ +  P  +  LVFG  F
Sbjct:    7 AGPSRCLDALIIALNQASGGEWYT-STMQLQLASLELCASCRSMHLLKLNVQHGTPTRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGLALRNMTG--DAWSEVTTFSLGPGFDDDLPRGIQWPEKLTLLGLGPG-------FNRSVEHLSLPASVRFLVFGASF 167          
BLAST of mRNA_H-paniculata_contig6611.14485.1 vs. uniprot
Match: A0A6H5JA08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA08_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 9.700e-13
Identity = 61/171 (35.67%), Postives = 80/171 (46.78%), Query Frame = 0
Query:   18 VETASGRSLCLEAIAIVLHEACSGRTVSVSTKTLQLVSSHFCEVCRRVSTLRVKVGKDTPRALWAAPDDRHLATSV-----TRVPLLRARAVTW-MTCAAAEFMTGENDVLVNVEFVEFGPEFNRSL-EGVVWPEGVKTIRFGSGAYDNTAKFNQPIKRVRWPELLEQLVF 181
            VET  G S CL+A+ I L++A  G   + ST  LQL S   C  CR +  L++ V   TP  LW          SV     TRVP++RAR VTW +   A   MTG  D    V     GP F+  L  G+ WPE +     G G       FN+ ++ +  P  +  LVF
Sbjct:   36 VET--GPSRCLDALIIALNQASGGEWYT-STMQLQLTSLELCAACRSMHLLKLNVQHGTPPRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGVALRNMTG--DAWSEVTTFSLGPGFDDDLPRGIQWPEKLTLFGVGPG-------FNRSVEHLSLPASVRFLVF 194          
BLAST of mRNA_H-paniculata_contig6611.14485.1 vs. uniprot
Match: A0A6H5JL12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL12_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.880e-6
Identity = 44/148 (29.73%), Postives = 62/148 (41.89%), Query Frame = 0
Query:   21 ASGRSLCLEAIAIVLHEACS----------GRTVSVSTKTLQLVSSHFCEVCRRVSTLRVKVGKDTPRALWAAPDDRHLATSVTR----------VPLLRARAVTWMTCAAAEFMTGENDVLVNVEFVEFGPEFNRSLEGVVWPEGVK 148
            A G SL   A+ +VL    S           R    +T+ LQLVS    + CR V+    ++ + TPR LW     R +     R          +P  R  +VTW        +    +VL  +E +E+G  FN  L+ VVWP  VK
Sbjct:   21 AQGTSLAAAALHVVLQHDLSVDRRGAPHPDRRRFIATTQELQLVSVWLSQTCRTVAGCHARIARGTPRRLWCPLSTRRITRGQRRRSGSLDGSPRLPPRRLTSVTWEKTIRE--LGQAQEVLSELENLEWGRMFNERLDAVVWPPKVK 166          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6611.14485.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FT95_ECTSI6.510e-1535.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA08_9PHAE9.700e-1335.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL12_9PHAE3.880e-629.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 317..358
e-value: 2.2E-6
score: 27.7
coord: 273..315
e-value: 4.2E-6
score: 26.8
coord: 217..249
e-value: 1.6E-6
score: 28.1
coord: 163..205
e-value: 1.3E-8
score: 34.9
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 124..320
coord: 217..400
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 189..399

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6611contigH-paniculata_contig6611:783..3377 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6611.14485.1mRNA_H-paniculata_contig6611.14485.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6611 259..4718 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6611.14485.1 ID=prot_H-paniculata_contig6611.14485.1|Name=mRNA_H-paniculata_contig6611.14485.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=428bp
MSLSGTKRPGDQICQGEVETASGRSLCLEAIAIVLHEACSGRTVSVSTKT
LQLVSSHFCEVCRRVSTLRVKVGKDTPRALWAAPDDRHLATSVTRVPLLR
ARAVTWMTCAAAEFMTGENDVLVNVEFVEFGPEFNRSLEGVVWPEGVKTI
RFGSGAYDNTAKFNQPIKRVRWPELLEQLVFGRDFNQPITDVVWPSSLRL
LTFCYNFNLRLDRVAWPASLQQLTLGRSFDQPIKGVVWPSSLKQLTFGFS
FNRSIQGVMWPASLREVKFGAKFNQPIKGAGQPGSLERLTFGFHFNQPVE
GVVWPASLQYLAFSDEFNQPVGAVLWPASLHTLIFGYNFNQPVEGVIWPP
TLKVLEFGREFNHPIKGVKWPKLEDLRFGWKFNRSVKGVKWPRTLERLRF
GQFRRGMENVAWPPWLCWGQPNFDEPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP