prot_H-paniculata_contig6608.14482.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6608.14482.1
Unique Nameprot_H-paniculata_contig6608.14482.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length286
Homology
BLAST of mRNA_H-paniculata_contig6608.14482.1 vs. uniprot
Match: A0A6H5KVI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI4_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 2.710e-39
Identity = 95/195 (48.72%), Postives = 120/195 (61.54%), Query Frame = 0
Query:   93 TKKLEDLLWGHESWQCDGFDSSLEEQVEDRYAALKMDVLVTLDG--GGSDNGGISDPSSPEGSCSSIPQSGPSDGSGAEGPKTIADLLTSASSSVSQENPGGIFSAFGVSGAENGDNVEGGRGEKEEEFMWGCSSRQEERDQLLSFASLGCFDPSARLQALMLLTTGQRLRMARDALAERLKVLVAKSALNGLGN 285
             K L DLLWGHE+++ DGFDSSLE+QVE  Y  LK  + V+L+   GG+D       +   G        G      A GPKTIAD+               +           G+      G+ E +++WGC+S QEER+QL+SFASLGCFDPSARLQ+LML++TG+RLRMARDALAERLKVLVAKSAL+ LG+
Sbjct:  340 AKGLGDLLWGHEAYESDGFDSSLEDQVEAMYDCLKAHLTVSLEENRGGADAAAFGATAKKTG--------GDRPWGAASGPKTIADV---------------VAXXXXXXXXXGGEMPSSDEGDGEGQYLWGCTSPQEEREQLVSFASLGCFDPSARLQSLMLMSTGERLRMARDALAERLKVLVAKSALSQLGD 511          
BLAST of mRNA_H-paniculata_contig6608.14482.1 vs. uniprot
Match: D8LHT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHT1_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 2.690e-34
Identity = 86/182 (47.25%), Postives = 109/182 (59.89%), Query Frame = 0
Query:   93 TKKLEDLLWGHESWQCDGFDSSLEEQVEDRYAALKMDVLVTLDG--GGSDNGGISDPSSPEGSCSSIPQSGPSDGSGAEGPKTIADLLTSASSSVSQENPGGIFSAFGVSGAENGDNVEGGRGEKEEEFMWGCSSRQEERDQLLSFASLGCFDPSARLQALMLLTTGQRLRMARDALAERLK 272
             K L DLLWGHE+++ DGFDSSLE+QVE  Y  LK  + V+L+   GG+D       +   G        G      A GP+TIAD+       V             V  ++ GD         E +++WGC+S QEER+QL+SFASLGCFDPSARLQ+LML++TG+RLRMARDALAERLK
Sbjct:   68 AKGLGDLLWGHEAYESDGFDSSLEDQVEAMYECLKAHLTVSLEENRGGADAAAFGAAAKKTG--------GDRPWGAASGPQTIADV-------VXXXXXXXXXXXXEVPPSDEGDG--------EGQYLWGCTSPQEEREQLVSFASLGCFDPSARLQSLMLMSTGERLRMARDALAERLK 226          
BLAST of mRNA_H-paniculata_contig6608.14482.1 vs. uniprot
Match: A0A7S4LGU5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LGU5_9EUGL)

HSP 1 Score: 56.6 bits (135), Expect = 5.290e-6
Identity = 27/64 (42.19%), Postives = 43/64 (67.19%), Query Frame = 0
Query:  221 WGCSSRQEERDQLLSFASLGCFDPSARLQALMLLTTGQRLRMARDALAERLKVLVAKSALNGLG 284
            WGC S+++   QL +F +  CF P AR++A+ + +T +R+  A + L E+++VL AKSAL  LG
Sbjct:  132 WGCESQEDFELQLRAFRACACFPPGARIEAMAMRSTAERMDKAVELLTEQVRVLAAKSALAQLG 195          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6608.14482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KVI4_9PHAE2.710e-3948.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHT1_ECTSI2.690e-3447.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4LGU5_9EUGL5.290e-642.19Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6608contigH-paniculata_contig6608:2579..9597 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6608.14482.1mRNA_H-paniculata_contig6608.14482.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6608 2004..10575 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6608.14482.1 ID=prot_H-paniculata_contig6608.14482.1|Name=mRNA_H-paniculata_contig6608.14482.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=286bp
MGKFRRGGGELDLTQIGPVSAQFSTGAGSSSSSTPGGSAGNDPQDDAGTR
SAETGSGASRKVDAFAEEAGDEEGEGERQAGGVGGGESMNEGTKKLEDLL
WGHESWQCDGFDSSLEEQVEDRYAALKMDVLVTLDGGGSDNGGISDPSSP
EGSCSSIPQSGPSDGSGAEGPKTIADLLTSASSSVSQENPGGIFSAFGVS
GAENGDNVEGGRGEKEEEFMWGCSSRQEERDQLLSFASLGCFDPSARLQA
LMLLTTGQRLRMARDALAERLKVLVAKSALNGLGN*
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