prot_H-paniculata_contig66.14474.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig66.14474.1
Unique Nameprot_H-paniculata_contig66.14474.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length2436
Homology
BLAST of mRNA_H-paniculata_contig66.14474.1 vs. uniprot
Match: A0A6H5KYK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK9_9PHAE)

HSP 1 Score: 886 bits (2289), Expect = 7.360e-273
Identity = 607/1191 (50.97%), Postives = 717/1191 (60.20%), Query Frame = 0
Query: 1377 APSIQGVLALSTNALSSCGK-CDTGLAKAFDVDAYLVRCNCPGEDTRRRRTTVYNLFSPGWNTTSMDPLDSPDHRGGVHLRRRLSDVTKVPFVVTVPGTTFDGTYSSLSFFLANYEEVANEMGVDSDQVQFSALSFSATTMSQIAEEEDNTDVALVVGPPLSDASSGAIGIFVLFLLVLLLATGGCLWALIGCCRTRSRRKEV---------LM--TSKPVSSASAASASVDEEYYNTYNPIRTGGMM-PKGKAIAPQTVKNLSPTASQTQRSEMFTNLLEATPPRDDPIYTEMIGTLGLFGTFYMSKEDMDYCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQS-----ATDALSRYDQIIVTARIVLMFDGSSGQSQAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGVDGQSTTLDWVHGLQPEDLEKFLAEKKEQRMRVLCLDLEPTGIPQQALRDDDEVVRAAHSLRSTSSPPSEVQMELPFQGAEREMTASSAMSPQGLMSMHEAPFDDHSGYSYGGSSPG--GSSFQSSH----RSPAANARALR---GIVPDSASGSVLSSSSAFTEESG---PESPLSRMSAHSYGRSASGISGQSP---TVSTRTGDQSAIDARRVFQSG--------------------QSSQTAGTG--------------------------------------------------VSGVTGDSFASSHYNDVYGDSSSVDSEPRHKSGGHVIVEGPQVQNYFAEQPSGRNLLHV-NNPAGARPGLTDADHAAAAAEAAARVLPPARTLGTYQEQPSGRSLMRSHEGVSVAQRGEAGVEAPGHGKSGDYSEEMSVSESEGSSRWEEDSAAQSYPQ-----------------------RSSYEPS----RASSGFGPVGEG----EGGGEGATHSSAVSHVQETYVSGSSGSAMKEGDSLLDGANSAGPGGGXXXXXXXXXXXXASRLSGSGLGSDPGLPPRGGQPVL---QLVNSSSSSDVSRVQAPYSVTRNQSHPIIG-QGSWRSSGTTEGDEGMLAQADSDRYLNSEAASGFESQMGPEQQSPVGGLPRPPNRGESQGEGDYGSVWLANRAHARQFD 2428
            APS+ GVL ++  A+  C   C+ GLA AFDV  YLVRC+CP  +  RR  ++    +  WN+TS+ P +     G  +LRRRL + +   FVVTVPG T  G   S+++F  NY  V+  +GVDS+ VQFS+L FSAT++S I EE  N+DV LVV PP SDAS+ A+G+FVLFL+ LLL T GCLWA++G CR R R KE          LM  T+  VS AS   +  + EYY+ +NPIRTGGM+ P GKAIAP ++K +SPT SQT+++E+FTNL+EATPPR DPIYTEMIGTLGLFGTFYMSKEDMD+CAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQ+     ATD+LSRYDQIIVTARIVLMFDGSSGQS AIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLG DGQSTTLDWVHGLQP+DLEKFLAEKKEQRMRVLCLDLEPTGIPQQALRDDDEVV AA+SL+S SSP S  QMELPFQGA+ E T SSAMSPQGLMSMH+ PFDD S  SYG S PG  GSS  SS+    RS   +  A+R   G V DSASGSV++SSS ++EE     PESPLSRMS HSYG S+   S Q+    +   R    S IDAR+VF+SG                    Q S+  G G                                                  + G+   SFASSHYN+VYGDSSSV+S+ + +       E P V+NYF+EQPSGRNLLHV  +  G R   T  D          R       +G Y+E       +       +                         SES+ SS W  D+ AQS                          RS+Y           G  PV       +G    A+ SSA +       S  + ++  + D+   G+ ++  GGG            A R  G G+     +PP   QP+L   Q   SS SS VSRV    S     SH ++  Q SW++S    G  G  A+   +R L+ E           EQQ+      R  +    Q +GD+G VWLA+RAHARQFD
Sbjct: 1381 APSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVEFTRR--SLGGWLTEEWNSTSVSPTE-----GFYYLRRRLDETSDAGFVVTVPGPTTSGLIQSINYFQNNYGRVSEALGVDSEDVQFSSLQFSATSISPITEEASNSDVQLVVNPPASDASAAAVGMFVLFLVALLLGTCGCLWAILGFCRQRRRAKEASRQDFFSSKLMGSTAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQATRSRAATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGADGQSTTLDWVHGLQPDDLEKFLAEKKEQRMRVLCLDLEPTGIPQQALRDDDEVVGAANSLQSESSPASSTQMELPFQGADDE-TPSSAMSPQGLMSMHDQPFDDQS-LSYG-SMPGSPGSSLLSSNLYTNRSLGGDREAMRQARGGVRDSASGSVITSSSNYSEEEQSEVPESPLSRMSVHSYGPSSMASSAQAGGRGSGGVRRHGTSPIDARQVFESGSTTSQSESEERHRGMSRGTSQDSEEVGGGFRSGSGSGRRSGVEGGGFRSGSGSGSXXXXXXXXXXXXXXXXXXXXXXXXLDGLASSSFASSHYNEVYGDSSSVESQTQRR-------EDPTVENYFSEQPSGRNLLHVLTHQRGER---TPRDEG--------RQSQVGPGIGAYREXXXXXXXVHDPSRSKIDGXXXXXXXXXXXXXXXXXXXXXXXSESDRSSAWN-DTDAQSXXXXXXXXXXXXXXXXXXXXXXXTAARSAYSSGGTVQSGRHGTSPVVREVDVYDGVSSEASMSSAGTEAASRVQSEMTSTSTYDHDTAAGGSTASFQGGGGDSGR-------AHRRPGPGVR----VPPSPSQPMLGYQQGYGSSRSSIVSRVAGAESEMG--SHRLVPPQDSWQNSPGPGG--GASAEGGIERVLSGETTDSSIL----EQQA------RDRHGSGQQEDGDFGRVWLADRAHARQFD 2517          
BLAST of mRNA_H-paniculata_contig66.14474.1 vs. uniprot
Match: D8LG77_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG77_ECTSI)

HSP 1 Score: 855 bits (2209), Expect = 5.960e-270
Identity = 472/695 (67.91%), Postives = 540/695 (77.70%), Query Frame = 0
Query: 1377 APSIQGVLALSTNALSSCGK-CDTGLAKAFDVDAYLVRCNCPGEDTRRRRTTVYNLFSPGWNTTSMDPLDSPDHRGGVHLRRRLSDVTKVPFVVTVPGTTFDGTYSSLSFFLANYEEVANEMGVDSDQVQFSALSFSATTMSQIAEEEDNTDVALVVGPPLSDASSGAIGIFVLFLLVLLLATGGCLWALIGCCRTRSRRKEV----LMTSK-------PVSSASAASASVDEEYYNTYNPIRTGGMM-PKGKAIAPQTVKNLSPTASQTQRSEMFTNLLEATPPRDDPIYTEMIGTLGLFGTFYMSKEDMDYCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQSATDALSRYDQIIVTARIVLMFDGSSGQSQAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGVDGQSTTLDWVHGLQPEDLEKFLAEKKEQRMRVLCLDLEPTGIPQQALRDDDEVVRAAHSLRSTSSPPSEVQMELPFQGAEREMTASSAMSPQGLMSMHEAPFDDHSGYSYGG--SSPGGSSFQSSHRSPAANARALRGIVPDSASGSVLSSSSAFTEESG---PESPLSRMSAHSYGRSASGISGQSP---TVSTRTGDQSAIDARRVFQSG 2050
            APS+ G L +S  A+  C   C+ GLA AFDV  YLVRC+CP  +  RR  ++    + GWN+T++ P +     G  +LRRRL + +   FVVTVPGTT  G   S+++F  N++ V+  +GVDS+ VQFS+L FSAT+ S I EE  N DV LVV PP SDAS+ A+G+FVLFL+ LLL T GCLWA++G CR R R KE       +SK        VS AS   +  + EYY+ +NPIRTGGM+ P GKAIAP ++K +SPT SQT+++E+FTNL+EATPPR DPIYTEMIGTLGLFGTFYMSKEDMD+CAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQ+ATD+LSRYDQIIVTARIVLMFDGSSGQS AIREAVPLFQQVYKIIR KCPQWHEGNVQLMGV LAITFLEYG NSQTLGVD QSTTLDWVHGLQP+DLEKFLAEKK+QRMRVLCLDLEPTGIPQQALRD+DEV+RAA+SL+S SSP S  QMELPFQGA+ E T SSAMSPQGLMSMH+ PFDD S  SYG    SPG S   S+  +     R  RG V DSASGSV++SSS ++EE     PESPLSRMSAHSYG S+   S Q+    +   R    S IDAR+VF+SG
Sbjct:  885 APSVSGALTMSLAAMEQCEDGCEVGLANAFDVQPYLVRCSCPEVEISRR--SLGGWLTEGWNSTTVSPTE-----GSYYLRRRLEETSDAGFVVTVPGTTTSGLIQSINYFQNNFDRVSEALGVDSENVQFSSLQFSATSFSPITEEASNNDVQLVVNPPASDASAAAVGMFVLFLVALLLGTCGCLWAILGFCRQRMRAKEASRKDFFSSKMMGSAAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQAATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRGKCPQWHEGNVQLMGVSLAITFLEYGFNSQTLGVDAQSTTLDWVHGLQPDDLEKFLAEKKDQRMRVLCLDLEPTGIPQQALRDNDEVIRAANSLQSESSPTSSAQMELPFQGADDE-TPSSAMSPQGLMSMHDQPFDDQS-LSYGSMPGSPGSSLLSSNLHTNREAMRQARGGVRDSASGSVITSSSNYSEEEQSEVPESPLSRMSAHSYGPSSMASSAQAGGRGSGGVRRHGTSPIDARQVFESG 1570          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig66.14474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYK9_9PHAE7.360e-27350.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG77_ECTSI5.960e-27067.91Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 4..20
score: 49.41
coord: 133..158
score: 30.77
coord: 104..120
score: 34.12
coord: 76..97
score: 41.82
coord: 36..48
score: 52.31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1544..1566
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..1543
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1567..2435
NoneNo IPR availableTMHMMTMhelixcoord: 1653..1670
NoneNo IPR availableTMHMMTMhelixcoord: 1544..1566

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig66contigH-paniculata_contig66:38359..54344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig66.14474.1mRNA_H-paniculata_contig66.14474.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig66 37794..56972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig66.14474.1 ID=prot_H-paniculata_contig66.14474.1|Name=mRNA_H-paniculata_contig66.14474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2436bp
MVAPTAPPVTTPTLSPAETPTSTPVTGLTALPAVSPTSPPLTESTVPPIA
TPTSSPVDGLSSAPVELPTSPPLMEPTALPVTVPTIPPVETPTPPPSAGL
TASPAVLSTTPPITEQTVPPVPTQTLQPMIIVPTLPPVESPTSPPVTDPT
APPVTTPTIPPIEAPTSPPAAGTTVPPAVSPTNPPLTDSTGPPVPTQTLL
PVGGPTSTPIESSTSPPATDPTAPPVEATAPPVEAPTSPPEVGSTVPPAF
GPTSPPATELTGSPVATPSSPPADELSSAPVETPTALPVAGPTSLPFQSP
TGPPGTEPTILPVATPTTPPETPTALPVTDATTPPVETTTTVPVETPPPS
PAAGLTSPPDLGPTSLPVTEPTVPPADTLITLAPVDPGLAPVAAPTTPPS
SSTNPPVIDETPLPAATTTSTPISTPSLSPVSEPTTPVAVVTTAPDILTT
STPVIVVAPTTPPDLTEPSSSPVSAPFTTLAPASVSPLVTSPTSPPVEAT
TTAPRSPESPFPETSSPMVLPMIDATGSPVATVSTLSPAVISSFSPIATP
TSLPVGTPGTAVPIANPASPPLAPTPSPTLLRGGSLVTPSPAAGPISPPV
PSLAPSARVTIEPTPSPTLLRGAAPSFLASAEPSSGEVASTQGPAVTAST
SLSPDTASPVSPRFASPSPQSLSPLATPSLSPVAGSPTTEEPLTSSSPAA
TPTLPVATPNPGAGTQVPVEVPAFSNTVAPAPSTVTTAPAALTPPPVIVS
PTTSPLTSPSTSPPSLLPHTNSPATPPSPSPTTLLPMFPTLTQPPDTVTS
PPATVTAPPATAPPEPTPEPTPAPMVIPPPATMQPGTATTAPIVSNPDTS
QPVTSTPVNVPTTPAPGTPPLATDQPMTASPIPTSLVPSPPPIPSPSPVL
TTQPVAPITGTEAPEASPPSVQPFVPPTDPATPQPSPSFPTTTSSPAFTP
IPVTPPTTGAPAGTPTTGQPTVSPILETTTDPVAATPPGASPSPFATPPP
GNQFIPTPSPTVQQPNAPPTTIQPIAPTAQPLTDAPMVQEPPTGSPATTS
IDPSLGPVVASLSPSPGGGPPVLTETPAPAVVAGQPTVIQTPSPSPLPTF
GETLTPAAPPTLPNLPTTSQPSFATPVENPSAVLPTPSPMFSGPPSPFPT
VMTTVAPAPGEIPPTIDNTLAPSAEATAQPAPTNPPLTDIPSPPPVTPIT
AAPVPSDDTLPPAEGFTPQPVVPGMPTVQPTPLAATFSPAAAPISRKVVT
DSPLLPNETSPSLAPDQLTPSPTLAQPFAIPTRNPATPTRSPVVTPPVSA
PRTMSPEVGAPTPTPGPQTQAPAEKIPRTLAPIPPPGLEPTPSPFLSPTP
APLRPGTTRAPLATPAPVPTPAPSSAAPSIQGVLALSTNALSSCGKCDTG
LAKAFDVDAYLVRCNCPGEDTRRRRTTVYNLFSPGWNTTSMDPLDSPDHR
GGVHLRRRLSDVTKVPFVVTVPGTTFDGTYSSLSFFLANYEEVANEMGVD
SDQVQFSALSFSATTMSQIAEEEDNTDVALVVGPPLSDASSGAIGIFVLF
LLVLLLATGGCLWALIGCCRTRSRRKEVLMTSKPVSSASAASASVDEEYY
NTYNPIRTGGMMPKGKAIAPQTVKNLSPTASQTQRSEMFTNLLEATPPRD
DPIYTEMIGTLGLFGTFYMSKEDMDYCAMRLYSNFKQAQENMERHAILDS
IDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVV
YTEAEEEAEFWQGLQSATDALSRYDQIIVTARIVLMFDGSSGQSQAIREA
VPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGVDGQS
TTLDWVHGLQPEDLEKFLAEKKEQRMRVLCLDLEPTGIPQQALRDDDEVV
RAAHSLRSTSSPPSEVQMELPFQGAEREMTASSAMSPQGLMSMHEAPFDD
HSGYSYGGSSPGGSSFQSSHRSPAANARALRGIVPDSASGSVLSSSSAFT
EESGPESPLSRMSAHSYGRSASGISGQSPTVSTRTGDQSAIDARRVFQSG
QSSQTAGTGVSGVTGDSFASSHYNDVYGDSSSVDSEPRHKSGGHVIVEGP
QVQNYFAEQPSGRNLLHVNNPAGARPGLTDADHAAAAAEAAARVLPPART
LGTYQEQPSGRSLMRSHEGVSVAQRGEAGVEAPGHGKSGDYSEEMSVSES
EGSSRWEEDSAAQSYPQRSSYEPSRASSGFGPVGEGEGGGEGATHSSAVS
HVQETYVSGSSGSAMKEGDSLLDGANSAGPGGGNGGDAAGVASAAASRLS
GSGLGSDPGLPPRGGQPVLQLVNSSSSSDVSRVQAPYSVTRNQSHPIIGQ
GSWRSSGTTEGDEGMLAQADSDRYLNSEAASGFESQMGPEQQSPVGGLPR
PPNRGESQGEGDYGSVWLANRAHARQFDPNMRGSL*
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