prot_H-paniculata_contig659.14460.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig659.14460.1
Unique Nameprot_H-paniculata_contig659.14460.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length352
Homology
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BLAST of mRNA_H-paniculata_contig659.14460.1 vs. uniprot
Match: D8LU69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU69_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 1.620e-71
Identity = 153/267 (57.30%), Postives = 171/267 (64.04%), Query Frame = 0 
Query:   96 RRPTPAEAAELLRRRSSVDEVIGLLAGPAAADGSYDSGSGRPQQYDPAQFDSWRNSLTKVLGHLGFDFEDENGMPVQGST---ESKRSPAKCI-----SSRGASQYLSWGGASAMSFEDNPEEFHDSLRQIPMKWRSSLSSIMNSMASNGVLEEAVGAEGGGGMD------------------------GVDVGPDGK----LTGERKRLEQQASLEMLQSVMRETLESMSQGTDNRD--TEDGEAXXXXXXXXXXXMDSIRRANAD 324
            RRPT AEAAELLRRRSSVDEVIGLL+ PAA DGS++      Q  DPAQFDSWRNSLTKVLGHLGFDFE+E G P +      + KRSP         +SRG+SQ+LSWGG SAMSFE+ PEEFH+SLRQIPM+WRSSLSSIM SMASNG  +E  GA   G                           G+DV  DG      TGERKRLEQQASLEMLQSVMRETLESMS G D  +  TEDGE            M S+ RA ++
Sbjct:   17 RRPTAAEAAELLRRRSSVDEVIGLLSAPAA-DGSFEDEGMGSQDCDPAQFDSWRNSLTKVLGHLGFDFENEEGAPCEEEELGPDGKRSPTDTDKHSRHNSRGSSQFLSWGGTSAMSFEERPEEFHESLRQIPMRWRSSLSSIMTSMASNGGFDEHGGAYANGAGXXXXXXXXXXXXXXXXXXXXXXXNMGMDVSGDGGNVTGQTGERKRLEQQASLEMLQSVMRETLESMS-GADGHEASTEDGEQEAKAAATAALAMGSMCRAKSN 281
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BLAST of mRNA_H-paniculata_contig659.14460.1 vs. uniprot
Match: A0A6H5JLW3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW3_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 2.080e-64
Identity = 148/259 (57.14%), Postives = 166/259 (64.09%), Query Frame = 0 
Query:   96 RRPTPAEAAELLRRRSSVDEVIGLLAGPAAADGSYDSGSGRPQQYDPAQFDSWRNSLTKVLGHLGFDFEDENGMPVQGSTESKRSPAKCISSRGASQYLSWGGASAMSFEDNPEEFHDSLRQIPMKWRSSLSSIMNSMASNGVLEEAVGAEGGGGMD-----------------------GVDVGPDGK----LTGERK-RLEQQASLEMLQSVMRETLESMSQGTDNRD--TEDGEAXXXXXXXXXXXMDSIRRANAD 324
            RRPT AEA ELLRRRSSVDEVIGLL+ PAA DGS++      Q  DPAQFDSWRNSLTKVLGHLGFDFE+E G P +             +SRG+SQ+LSWGG SAMSFE+ PEEFH+SLRQIPM+WRSSLSSIM SMASNG  +E  GA   G  +                       G+DV  DG      TGERK RLEQQASLEMLQSVMRETLESMS G D  +  TEDGE            M S+ RA ++
Sbjct:  861 RRPTTAEAVELLRRRSSVDEVIGLLSAPAA-DGSFEDEGMGSQDCDPAQFDSWRNSLTKVLGHLGFDFENEEGTPCEEEELGPDGKPSRHNSRGSSQFLSWGGTSAMSFEERPEEFHESLRQIPMRWRSSLSSIMTSMASNGGFDEHGGAYANGAGNXXXXXXXXXXXXXXXXXXXXXNMGMDVTGDGGNVTGQTGERKQRLEQQASLEMLQSVMRETLESMS-GADGHEASTEDGEQEAKAAATAALAMGSMYRAKSN 1117
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig659.14460.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LU69_ECTSI1.620e-7157.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLW3_9PHAE2.080e-6457.14HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig659contigH-paniculata_contig659:4781..8064 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig659.14460.1mRNA_H-paniculata_contig659.14460.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig659 4781..8091 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig659.14460.1 ID=prot_H-paniculata_contig659.14460.1|Name=mRNA_H-paniculata_contig659.14460.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=352bp
MSNNGMDSLRHLGGVMGPGVRYDGRGHPLQQRRREHDQDRSQQQHPHHRQ
QPHYTQPLRDERDGGRTDGGATGPERSGGGRHKSVPSGGMGLSPGRRPTP
AEAAELLRRRSSVDEVIGLLAGPAAADGSYDSGSGRPQQYDPAQFDSWRN
SLTKVLGHLGFDFEDENGMPVQGSTESKRSPAKCISSRGASQYLSWGGAS
AMSFEDNPEEFHDSLRQIPMKWRSSLSSIMNSMASNGVLEEAVGAEGGGG
MDGVDVGPDGKLTGERKRLEQQASLEMLQSVMRETLESMSQGTDNRDTED
GEAEAKAAAAAVCTMDSIRRANADGIAVRGGGAGGGGSGSGRGTAGSTIG
NV
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