prot_H-paniculata_contig6540.14395.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6540.14395.1
Unique Nameprot_H-paniculata_contig6540.14395.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length673
Homology
BLAST of mRNA_H-paniculata_contig6540.14395.1 vs. uniprot
Match: A0A6H5KS39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS39_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 9.570e-62
Identity = 270/678 (39.82%), Postives = 319/678 (47.05%), Query Frame = 0
Query:    1 MPDMDSPTAKNVSAIIEASGXXXXXXXXXXXAVKALSKRPREETSPVSGKRGRGENGDM---LMLQVPHVLTPALSVQATQGNTTPRSPP-PPPLLESPSKLNRA-SPFAVDSSTASXXXXXXXXTGFTAFPGLGTAKEQWSPCAKPDEASSTPDLSWGQLAAARRKTVPPPKALPSLAATDPVFHAALLRVLHRRGGETCPEAQGWRWSGDAPARFNHWPCALHPDLMNLLAYISAGEERVVLTGCDVRGRNGTDCCXXXXXXXXXXXXXXXXXXREPSPWRAVSSVRGDESSWAPPPAIMSSIGSPSTGVSVLAATAGGTTP-RAPTRARP---ALTPCSALRAPAGVAATPESRARSAAKSRGVRFATHDMTVVDTPDPIRGGSEKGMVSALGGLQSILSAAEQVRLVASLGASXXXXXXXXXXXXXXXGTDVSFSSRLRAVGAMGTLLIRGGGGVAGAAKHGEFEDYFDRFSSGGNSNRRNKSDNGCDEGSXXXXXXXXXXXXXXASKAANASACPVPTTNGSLTATGPDRNAENPAGAAATACQPTDKNSSRVKHSFGEPLSLRTSSSNSNVDVLDMIIDNSNKKKTDIVAGAREKNSTADAGVESEGGKRLAEDIAALIEVLQQMACSNSAPGELVLEAGWGPEHSNATAFYARELAMLCGKGAWGAGEGVG 669
            MPDMD+P    +S I E    XXXXXXXX   V+  SKRPR+E SPV GKRGRG NGD+   L + VP   +  L       ++ P SP   PPL ESPSK+N+A SPFA  SS A XXXXXXXX                        AS T          +RRK   P  A PSL ATDP+FHAALLR+LHRR G+ C EA GWRW GD PARF+HWPCALHP +M+LLA +SA EE+VVLTGCD +  +   C  XXXXXXXXXX       R  +PW    + RG  +                      AA AG TTP  AP+   P   A TP SALR          S  R  +K+R VRF+THDM+VVDTPDP RGGS KGM+SALGGL+SILSAAE++R +A+ G                     +   R R     G L  RGG          ++E YFDRFS+                  XXXXXXXXXXXXXX                                                    F  PL                                                K + ED AA + VL+++A  ++APGE+ L  GWGPEH NA AFYA ELA LCG     +G  VG
Sbjct:    1 MPDMDTP---QISGIFEERAPXXXXXXXXVVGVQQASKRPRDEGSPVRGKRGRGANGDISLSLKISVPATSSSPL----VPSSSLPASPLWVPPLCESPSKINQAPSPFASYSSGAXXXXXXXXXXXXXXXXXXXXXXXXX--------ASVT----------SRRKGRMPHAAPPSLGATDPIFHAALLRLLHRRNGDHCAEAVGWRWRGDTPARFDHWPCALHPSVMDLLACVSASEEQVVLTGCDKK--HAESCNGXXXXXXXXXXEAAWRAPRPRTPW----AHRGRPA----------------------AAAAGVTTPIAAPSPLPPXASAQTPLSALRRSG-------SSRRLPSKNR-VRFSTHDMSVVDTPDPQRGGSAKGMMSALGGLESILSAAERIRELAAGGPG-------------------NSGGRER-----GGLERRGGDDGR------QYEGYFDRFSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------XXXXXXXXXEDFDAPLETEA--------------------------------------------KSVREDSAAFVTVLEEIANGDAAPGEVALAGGWGPEHRNAAAFYAEELAFLCGTKTGVSGREVG 518          
BLAST of mRNA_H-paniculata_contig6540.14395.1 vs. uniprot
Match: D8LQ83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ83_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 6.620e-40
Identity = 125/245 (51.02%), Postives = 146/245 (59.59%), Query Frame = 0
Query:  166 PPKALPSLAATDPVFHAALLRVLHRRGGETCPEAQGWRWSGDAPARFNHWPCALHPDLMNLLAYISAGEERVVLTGCDVRGRNGTDCCXXXXXXXXXXXXXXXXXXREPSPWRAVSSVRGDESSWAPPPAIMSSIGSPSTGVSVLAATAGGTTPRAPTRARPALTPCS----ALRAPAGVAATPESRARSAAKSRGVRFATHDMTVVDTPDPIRGGSEKGMVSALGGLQSILSAAEQVRLVASLG 406
            P  A PSL ATDP+FHAALLR+LH R G+ C EA GWRW GD PARF+HWPCALHP +M+LLA +SA EE+VVLTGCD   +   D C  XXXXXXXXXXXX    R P P R   + RG  +                      A  AG TT                   ALR          S  R  +K+R VRF+THDM+VVDTPDP RGGS KGM+SALGGL+SILSAAE++R +A+ G
Sbjct:    2 PHAAPPSLGATDPIFHAALLRLLHSRNGDHCAEAVGWRWRGDTPARFDHWPCALHPSVMDLLACVSASEEQVVLTGCD---KKHADSCHGXXXXXXXXXXXXEAAWRAPRP-RTPWAHRGGPA----------------------AVPAGATTXXXXXXXXXXXXXXXXXXXALRRSG-------SSRRLPSKNR-VRFSTHDMSVVDTPDPQRGGSAKGMMSALGGLESILSAAERIRELAAGG 212          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6540.14395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KS39_9PHAE9.570e-6239.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ83_ECTSI6.620e-4051.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6540contigH-paniculata_contig6540:8209..10227 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6540.14395.1mRNA_H-paniculata_contig6540.14395.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6540 8209..10898 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6540.14395.1 ID=prot_H-paniculata_contig6540.14395.1|Name=mRNA_H-paniculata_contig6540.14395.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=673bp
MPDMDSPTAKNVSAIIEASGGGVAAGGGGGAAVKALSKRPREETSPVSGK
RGRGENGDMLMLQVPHVLTPALSVQATQGNTTPRSPPPPPLLESPSKLNR
ASPFAVDSSTASSSSSSASSTGFTAFPGLGTAKEQWSPCAKPDEASSTPD
LSWGQLAAARRKTVPPPKALPSLAATDPVFHAALLRVLHRRGGETCPEAQ
GWRWSGDAPARFNHWPCALHPDLMNLLAYISAGEERVVLTGCDVRGRNGT
DCCSGGGREEDETAFLPPPPPREPSPWRAVSSVRGDESSWAPPPAIMSSI
GSPSTGVSVLAATAGGTTPRAPTRARPALTPCSALRAPAGVAATPESRAR
SAAKSRGVRFATHDMTVVDTPDPIRGGSEKGMVSALGGLQSILSAAEQVR
LVASLGASVSASGSHGGGKGVGEGTDVSFSSRLRAVGAMGTLLIRGGGGV
AGAAKHGEFEDYFDRFSSGGNSNRRNKSDNGCDEGSDSDDNDGVGNTGTR
ASKAANASACPVPTTNGSLTATGPDRNAENPAGAAATACQPTDKNSSRVK
HSFGEPLSLRTSSSNSNVDVLDMIIDNSNKKKTDIVAGAREKNSTADAGV
ESEGGKRLAEDIAALIEVLQQMACSNSAPGELVLEAGWGPEHSNATAFYA
RELAMLCGKGAWGAGEGVGVLGS
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