prot_H-paniculata_contig6489.14318.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6489.14318.1
Unique Nameprot_H-paniculata_contig6489.14318.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length649
Homology
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BLAST of mRNA_H-paniculata_contig6489.14318.1 vs. uniprot
Match: A0A6H5KHP8_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP8_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 8.790e-6
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0 
Query:  239 GSRIVGDWARRALLRKKMADAERGRRIRLQLEDEALVAATTTASNASDGC 288
            G R VGDWA++ALLRKK ADAERGRR+RL+LE+EA   AT+ A    + C
Sbjct:  118 GGRNVGDWAKKALLRKKFADAERGRRLRLRLEEEAGATATSLAGGCLESC 167
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6489.14318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KHP8_9PHAE8.790e-662.00DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6489contigH-paniculata_contig6489:2208..7653 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6489.14318.1mRNA_H-paniculata_contig6489.14318.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6489 2208..7953 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6489.14318.1 ID=prot_H-paniculata_contig6489.14318.1|Name=mRNA_H-paniculata_contig6489.14318.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=649bp
MSGDRAGIDGKKGGLSLGGQRKRSRMIPTSTSSETRLGLAQRDALRRRAR
SNGNNHAIDTLPFRRRRSDCSGGGGDGSSSGGGSLAVANNDEFLDDVRFD
VAPKDMCVPLGSQDTPGRRRVGDSSDSVVLQELCSLGSVLAAGIHRGEGG
AEDNSDRYGDDGSDTNNSRGARDDTLSGGNLLSRWLSSGGNSNQGSNSAC
EKTEQEGGEDAIVGSCSLVDASDGQGGGSGGNVATGGGGSRIVGDWARRA
LLRKKMADAERGRRIRLQLEDEALVAATTTASNASDGCGDGSCGAGKDAE
GAAGCPPASFQPSAERSLAVGDSLEEKNHLPKLSQTQKKAPAQASMVPAL
STSLELTPATSTGTADGIVTNKNGDSCVSREGAEGGTDQAVVIAVDDYGD
DEYGDCFSFLTCAELQAIEEETAKAYALSQSASQASTQPTTMTVAVKSEF
CAPGLPTYVGTNQINTHSNVGAKNAGEGGSWRGGGPAVTTTDEADEADEE
APIVGVKRPAGFRTSPSLMAVGPNAKRGGYRPHPRGGPTPSSTTQPANIS
RGSGSFSSSQPGREHSQGHSKEYSRGHGQGNSVSAQGNGRSPGGDLARNE
HHHHWQDNDNSQARAVSGRGVSPVASVEISRGGWVGSDAAAKAATGGSG
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