prot_H-paniculata_contig6485.14311.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig6485.14311.1
Unique Name	prot_H-paniculata_contig6485.14311.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	155

Homology

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BLAST of mRNA_H-paniculata_contig6485.14311.1 vs. uniprot
Match: D7G1U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U5_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 2.980e-64
Identity = 99/113 (87.61%), Postives = 103/113 (91.15%), Query Frame = 0

Query:    5 QNGSRVVCGTQNGVLVSWPWGNWGGRSNRFRGHPHSVDTLLKLDEDTVLTGSSDGIISRVVSVLPDKFLGLLGDHEDFPVESIKFSHDKTWIGSVSHDNKIRFWHAEYLFEED 117
            +NG RVVCGTQNGVLVSWPWG WG RS+RFRGHPHSVDTLL LDEDTVLTGSSDGII RVVS+ PDKFLGLLGDHEDFPVESI+FS DK WIGSVSHDN IRFWHA YLFEED
Sbjct:  196 KNGRRVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGII-RVVSIQPDKFLGLLGDHEDFPVESIQFSRDKMWIGSVSHDNNIRFWHAGYLFEED 307

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BLAST of mRNA_H-paniculata_contig6485.14311.1 vs. uniprot
Match: A0A662WRV0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WRV0_9STRA)

HSP 1 Score: 169 bits (427), Expect = 1.630e-49
Identity = 78/121 (64.46%), Postives = 97/121 (80.17%), Query Frame = 0

Query:    5 QNGSRVVCGTQNGVLVSWPWGNWGGRSNRFRGHPHSVDTLLKLDEDTVLTGSSDGIISRVVSVLPDKFLGLLGDHEDFPVESIKFSHDKTWIGSVSHDNKIRFWHAEYLFEEDSDEGEEEA 125
            +NG ++VCG+Q+GVLV + WG WG  S+RF GHP SV+ +LK+DEDT+LTGSSDGI+ RVV + P+K LGL+GDHEDFPVE++KFSHDK  IGSVSH NK+ FW   YLFEED  E E+ A
Sbjct:   93 KNGKKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVEAILKVDEDTILTGSSDGIV-RVVQLHPNKLLGLIGDHEDFPVETLKFSHDKKIIGSVSHTNKVHFWDVGYLFEEDDGEDEDVA 212

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BLAST of mRNA_H-paniculata_contig6485.14311.1 vs. uniprot
Match: A0A6A3F0F6_9STRA (ANAPC4_WD40 domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F0F6_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.740e-48
Identity = 79/121 (65.29%), Postives = 97/121 (80.17%), Query Frame = 0

Query:    5 QNGSRVVCGTQNGVLVSWPWGNWGGRSNRFRGHPHSVDTLLKLDEDTVLTGSSDGIISRVVSVLPDKFLGLLGDHEDFPVESIKFSHDKTWIGSVSHDNKIRFWHAEYLFEEDSDEGEEEA 125
            +NG ++VCG+Q+GVLV + WG WG  S+RF GHP SV+ LLK+DEDTVLTGSSDGI+ RVV + P+K LGL+GDHEDFPVE++KFSHDK  IGSVSH NK+ FW   YLF+ED  E E+ A
Sbjct:  194 KNGRKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPESVEALLKVDEDTVLTGSSDGIV-RVVQLHPNKLLGLIGDHEDFPVENMKFSHDKKIIGSVSHTNKVHFWDVGYLFDEDDGEDEDVA 313

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BLAST of mRNA_H-paniculata_contig6485.14311.1 vs. uniprot
Match: A0A662YDS4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDS4_9STRA)

HSP 1 Score: 166 bits (419), Expect = 4.280e-48
Identity = 76/119 (63.87%), Postives = 94/119 (78.99%), Query Frame = 0

Query:    5 QNGSRVVCGTQNGVLVSWPWGNWGGRSNRFRGHPHSVDTLLKLDEDTVLTGSSDGIIS-RVVSVLPDKFLGLLGDHEDFPVESIKFSHDKTWIGSVSHDNKIRFWHAEYLFEEDSDEGE 122
            +NG ++VCG+Q+GVLV + WG WG  S+RF GHP SV+ +LK+DEDT+LTGSSDGI+   VV + P+K LGL+GDHEDFPVE++KFSHDK  IGSVSH NK+ FW   YLFEED  E E
Sbjct:  109 KNGKKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVEAILKVDEDTILTGSSDGIVRYEVVQLHPNKLLGLIGDHEDFPVETLKFSHDKKIIGSVSHTNKVHFWDVGYLFEEDDGEDE 227

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BLAST of mRNA_H-paniculata_contig6485.14311.1 vs. uniprot
Match: A0A3M6VF45_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF45_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.640e-47
Identity = 78/116 (67.24%), Postives = 93/116 (80.17%), Query Frame = 0

Query:    5 QNGSRVVCGTQNGVLVSWPWGNWGGRSNRFRGHPHSVDTLLKLDEDTVLTGSSDGIISRVVSVLPDKFLGLLGDHEDFPVESIKFSHDKTWIGSVSHDNKIRFWHAEYLFEEDSDE 120
            +NG ++VCG+QNGVLV + W  WG  S+RF GHP SVD LLK+DEDTVLTGSSDGI+ RVV + P+K LGL+GDHEDFPVE++KFS+DK  IGSVSH NK+ FW   YLFEED  E
Sbjct:  194 KNGRKIVCGSQNGVLVIFSWDTWGDMSDRFPGHPDSVDALLKVDEDTVLTGSSDGIV-RVVQLHPNKLLGLIGDHEDFPVENLKFSYDKKIIGSVSHTNKVHFWDVGYLFEEDDGE 308

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BLAST of mRNA_H-paniculata_contig6485.14311.1 vs. uniprot
Match: A0A0P1A5F6_PLAHL (Transducin family protein wd-40 repeat family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5F6_PLAHL)

HSP 1 Score: 165 bits (417), Expect = 5.630e-47
Identity = 79/124 (63.71%), Postives = 98/124 (79.03%), Query Frame = 0

Query:    5 QNGSRVVCGTQNGVLVSWPWGNWGGRSNRFRGHPHSVDTLLKLDEDTVLTGSSDGIISRVVSVLPDKFLGLLGDHEDFPVESIKFSHDKTWIGSVSHDNKIRFWHAEYLFE--EDSDEGEEEAK 126
            +NG +VVCG+Q+GVLV + WG WG  S+RF GHP SV+TLLK+DEDTVLTGSSDGI+ RVV V P+K LGL+GDHED PVE++KFSHD+  IGSVSH NK+ FW   +LFE  E+ D GE + +
Sbjct:  194 KNGRKVVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVETLLKVDEDTVLTGSSDGIV-RVVQVHPNKLLGLIGDHEDLPVENLKFSHDRKMIGSVSHTNKVHFWDVGFLFEDEEEDDAGEHDER 316

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BLAST of mRNA_H-paniculata_contig6485.14311.1 vs. uniprot
Match: K3WEM9_GLOUD (ANAPC4_WD40 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEM9_GLOUD)

HSP 1 Score: 165 bits (417), Expect = 6.630e-47
Identity = 75/112 (66.96%), Postives = 92/112 (82.14%), Query Frame = 0

Query:    5 QNGSRVVCGTQNGVLVSWPWGNWGGRSNRFRGHPHSVDTLLKLDEDTVLTGSSDGIISRVVSVLPDKFLGLLGDHEDFPVESIKFSHDKTWIGSVSHDNKIRFWHAEYLFEE 116
            +NG +VVCG+Q+GVLV + WG WG  S+RF GHP SV+T+LK+DEDT+LTGSSDGII RVV V P+K LGL+GDHEDFPVE +KFSHDK  +GSVSH NK+ FW   YLF++
Sbjct:  195 KNGKKVVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVETVLKVDEDTILTGSSDGII-RVVQVHPNKLLGLIGDHEDFPVEMLKFSHDKRLVGSVSHTNKVHFWDVGYLFDD 305

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BLAST of mRNA_H-paniculata_contig6485.14311.1 vs. uniprot
Match: A0A8K1CJS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJS9_PYTOL)

HSP 1 Score: 164 bits (416), Expect = 7.580e-47
Identity = 77/119 (64.71%), Postives = 95/119 (79.83%), Query Frame = 0

Query:    5 QNGSRVVCGTQNGVLVSWPWGNWGGRSNRFRGHPHSVDTLLKLDEDTVLTGSSDGIISRVVSVLPDKFLGLLGDHEDFPVESIKFSHDKTWIGSVSHDNKIRFWHAEYLFEEDS-DEGE 122
            +NG ++VCG+Q+GVLV + WG WG  S+RF GHP SVD +LK+DEDTVLTGSSDGI+ RVV V P+K LGL+GDHEDFPVE++K SHD+  IGSVSH NK+ FW   YLF +D  D+GE
Sbjct:  194 KNGRKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPESVDAILKVDEDTVLTGSSDGIV-RVVQVHPNKLLGLIGDHEDFPVENLKLSHDQKIIGSVSHTNKVHFWDVSYLFNDDGEDDGE 311

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BLAST of mRNA_H-paniculata_contig6485.14311.1 vs. uniprot
Match: A0A0W8CRV6_PHYNI (ANAPC4_WD40 domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8CRV6_PHYNI)

HSP 1 Score: 164 bits (415), Expect = 1.120e-46
Identity = 80/121 (66.12%), Postives = 98/121 (80.99%), Query Frame = 0

Query:    5 QNGSRVVCGTQNGVLVSWPWGNWGGRSNRFRGHPHSVDTLLKLDEDTVLTGSSDGIISRVVSVLPDKFLGLLGDHEDFPVESIKFSHDKTWIGSVSHDNKIRFWHAEYLFEEDSDEGEEEA 125
            +NG ++VCG+Q+GVLV + WG WG  S+RF GHP SV+ LLK+DEDTVLTGSSDGI+ R VS  P+K LGL+GDHEDFPVE++KFSHDK  IGSVSH NK+ FW   YLFEED  +GE++A
Sbjct:  194 KNGRKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVEALLKVDEDTVLTGSSDGIV-RYVST-PNKLLGLIGDHEDFPVENLKFSHDKKIIGSVSHTNKVHFWDVGYLFEED--DGEDDA 310

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BLAST of mRNA_H-paniculata_contig6485.14311.1 vs. uniprot
Match: A0A5D6XKA4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKA4_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.740e-46
Identity = 74/111 (66.67%), Postives = 90/111 (81.08%), Query Frame = 0

Query:    5 QNGSRVVCGTQNGVLVSWPWGNWGGRSNRFRGHPHSVDTLLKLDEDTVLTGSSDGIISRVVSVLPDKFLGLLGDHEDFPVESIKFSHDKTWIGSVSHDNKIRFWHAEYLFE 115
            +NG +VVCG+Q+GVLV + WG WG  S+RF GHP SVD +LK+DEDT+LTGSSDGII RVV + P+K LGL+GDHEDFPVE +KFSHDK  +GSVSH NK+ FW   YLF+
Sbjct:  195 KNGKKVVCGSQDGVLVVFSWGTWGDMSDRFPGHPDSVDAMLKIDEDTILTGSSDGII-RVVQLHPNKLLGLIGDHEDFPVEVLKFSHDKKLVGSVSHTNKVHFWDVGYLFD 304

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig6485.14311.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig6485.14311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G1U5_ECTSI	2.980e-64	87.61	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A662WRV0_9STRA	1.630e-49	64.46	Uncharacterized protein (Fragment) n=1 Tax=Nothoph...	[more]
A0A6A3F0F6_9STRA	2.740e-48	65.29	ANAPC4_WD40 domain-containing protein n=19 Tax=Phy...	[more]
A0A662YDS4_9STRA	4.280e-48	63.87	Uncharacterized protein n=1 Tax=Nothophytophthora ...	[more]
A0A3M6VF45_9STRA	1.640e-47	67.24	Uncharacterized protein n=1 Tax=Peronospora effusa...	[more]
A0A0P1A5F6_PLAHL	5.630e-47	63.71	Transducin family protein wd-40 repeat family prot...	[more]
K3WEM9_GLOUD	6.630e-47	66.96	ANAPC4_WD40 domain-containing protein n=1 Tax=Glob...	[more]
A0A8K1CJS9_PYTOL	7.580e-47	64.71	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A0W8CRV6_PHYNI	1.120e-46	66.12	ANAPC4_WD40 domain-containing protein n=4 Tax=Pero...	[more]
A0A5D6XKA4_9STRA	2.740e-46	66.67	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 69..109 e-value: 4.9E-4 score: 29.4
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..135 e-value: 5.7E-12 score: 47.1
None	No IPR available	PANTHER	PTHR44156:SF5	WD REPEAT-CONTAINING PROTEIN 55	coord: 3..132
None	No IPR available	PANTHER	PTHR44156	FAMILY NOT NAMED	coord: 3..132
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 2..110

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig6485	contig	H-paniculata_contig6485:6649..12366 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig6485.14311.1	mRNA_H-paniculata_contig6485.14311.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig6485 6649..12375 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig6485.14311.1 ID=prot_H-paniculata_contig6485.14311.1|Name=mRNA_H-paniculata_contig6485.14311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=155bp
MVMNQNGSRVVCGTQNGVLVSWPWGNWGGRSNRFRGHPHSVDTLLKLDED
TVLTGSSDGIISRVVSVLPDKFLGLLGDHEDFPVESIKFSHDKTWIGSVS
HDNKIRFWHAEYLFEEDSDEGEEEAKDEHQQGHGAEASGAAGATNPGKEQ
GGDT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR036322	WD40_repeat_dom_sf