prot_H-paniculata_contig647.14297.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig647.14297.1
Unique Nameprot_H-paniculata_contig647.14297.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1003
Homology
BLAST of mRNA_H-paniculata_contig647.14297.1 vs. uniprot
Match: D7FQ52_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ52_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 4.010e-65
Identity = 156/281 (55.52%), Postives = 195/281 (69.40%), Query Frame = 0
Query:  244 YDMDRVRRRCRLXXXXXXXXXXXXXXXXXXXXXXXCCGHLGAKARFCSEHKLHGMVNLKTRAFRCKHKG-PETGESVLMA---------------------QLSGRSLLCNRACRFAFPTEPALYCLKHKMDGMVDVLNPRCSMGDCMEFPTHGYEGDQPTFCMTHMATGMKAIVAQSPNIMHWSTEARKQAAATARESSRLLNEREAGSAKVTPLPPKTDPDIRRKMQEAHASAARTIVAARPIEG--LSAGTCPLPPPQEEPTLEELALAFGEASGNPL 500
            +  DRVRRRCRLXXXXXXXXXXXXXXXXXXXXXXXCCGHLGAKARFCSEHK  GMVNLKTRAFRCKH+G P+                             + S R++ CNRACRFA+P E A+YC  H ++GMVDVLNP+CSM DC+E PT+G+ G+QPTFCM H   GM+ I+ QS N++HWS+EAR+QAAA+A E+ R+   R+AGSAKV+ LPPK D +   K+Q+AH SAA+ + A+R  +G    AG+  +P         +LALAFG +  +P+
Sbjct:  246 FKTDRVRRRCRLXXXXXXXXXXXXXXXXXXXXXXXCCGHLGAKARFCSEHKQEGMVNLKTRAFRCKHRGEPKPXXXXXXXXXXXXXXXXXTRNGKGAPPNKKKSRRAVTCNRACRFAYPNEMAVYCAVHALEGMVDVLNPQCSMDDCLEIPTYGFAGEQPTFCMVHSGPGMQVIMPQSTNVLHWSSEARRQAAASALEAKRIAGLRQAGSAKVSTLPPKKDINGLMKIQKAHMSAAKMVAASRVSDGGLNDAGSSLVP-------TSDLALAFGASMDDPM 519          
BLAST of mRNA_H-paniculata_contig647.14297.1 vs. uniprot
Match: D7FMP7_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMP7_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 2.010e-41
Identity = 310/527 (58.82%), Postives = 350/527 (66.41%), Query Frame = 0
Query:    4 CEFQGCKKPLTYGSDPQQGRKYCYLHKDTPQVDIRITRCAIVGCDAKPNFGYESEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPSFNYKGQRKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYGDSNKTAGRPLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDMDRVRRRCRLXXXXXXXXXXXXXXXXXXXXXXXCCGHLGAKARFCSEHKLHGMVNLKTRAFRCKHKGPE---TGESVLMAQLSGRSLLCNRACRFAFPTEPALYCLKHKMDGMVDVLNPRCSMGDCMEFPTHGYEGDQPTFCMTHMATGMKAIVAQSPNIMHWSTEARKQAAATARESSRLLNEREAGSAKVTPLPPKTDPDIRRKMQEAHA---------------SAARTIVAARPIEGLSAGTCPLPPP---QEEP--------TLEELALAFGEASGNPLH 501
            C    CKK   Y    Q+  KYC+LHK    +D+R  RC +  C+ +P++GY+ EAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     NY GQRK XXXXXXXXXXXXXXXXXXXXXXXXXXXX         GRP++   XXXXXXXXXXXXXXXXXXXXXXXXX YD DR+RRRCRL       XXXXXXXXXXXXXXXX CG  G K RFCSEHK  GM+NLKTRAFRCK++G       +  +M   +G++  CNRACR+A+P E A+YC KHK++GMVDV+NP C                            MK I AQ P  +HWS E R+QA A ARE +++  E EAGSA+ TPLPPK      ++M+                    AA   +A    E LSA T P+ PP    EE         T  ELALAF     + +H
Sbjct:    5 CGEPECKKQPYYAEPGQKKPKYCFLHKKPGHIDVRNKRCEVPNCEIRPHYGYDGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYAGQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGRPMWCPDXXXXXXXXXXXXXXXXXXXXXXXXXGYDRDRIRRRCRLHKLDDMVXXXXXXXXXXXXXXXXXCGFPGLKPRFCSEHKQDGMLNLKTRAFRCKYRGVAGLGIADDPMMPLPAGKTQPCNRACRYAYPGEEAVYCQKHKLNGMVDVINPSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKPIAAQKPTGLHWSAELRRQATANARERNKMEAEMEAGSARCTPLPPKAGTPEEKRMRXXXXXXXXXXXXXXXXRGPEAAAANMALNSREMLSASTYPIVPPFTTNEEVAAPPGMSITSAELALAFSGLPEDDMH 531          
BLAST of mRNA_H-paniculata_contig647.14297.1 vs. uniprot
Match: A0A6H5KYH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH5_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 2.510e-26
Identity = 87/229 (37.99%), Postives = 115/229 (50.22%), Query Frame = 0
Query:  302 KTRAFRCKHKGPE---TGESVLMAQLSGRSLLCNRACRFAFPTEPALYCLKHKMDGMVDVLNPRCSMGDCMEFPTHGYEGDQPTFCMTHMATGMKAIVAQSPNIMHWSTEARKQAAATARESSRLLNEREAGSAKVTPLPPKTDPDIRRKMQEAHA---------------SAARTIVAARPIEGLSAGTCPLPPP---QEEP--------TLEELALAFGEASGNPLH 501
            +TRAFRCK++G       +  +M   +G++  CNRACR+A+P E A+YC KHK++GMVDV+NP C                       HMA GMK I AQ P  +HW+ E R+QA A ARE +++  E EAGSA+ TPLPPK      ++M+                    AA   +A    E LSA T P+ PP    EE         T  ELALAF     + +H
Sbjct:  384 QTRAFRCKYRGVAGLGIADDPMMPLPAGKTQPCNRACRYAYPGEEAVYCQKHKLNGMVDVINPSCK---------------------AHMAVGMKPIAAQKPTGLHWNAELRRQATANARERNKMEAEMEAGSARCTPLPPKAGTPEEKRMRXXXXXXXXXXXXXXXXRGPEAAAANMALNSREMLSASTYPIVPPFTTNEEMAAPPGMSITSAELALAFSGLPEDDMH 591          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig647.14297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQ52_ECTSI4.010e-6555.52EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ52... [more]
D7FMP7_ECTSI2.010e-4158.82EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KYH5_9PHAE2.510e-2637.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig647contigH-paniculata_contig647:24462..33978 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig647.14297.1mRNA_H-paniculata_contig647.14297.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig647 24232..33978 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig647.14297.1 ID=prot_H-paniculata_contig647.14297.1|Name=mRNA_H-paniculata_contig647.14297.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1003bp
MASCEFQGCKKPLTYGSDPQQGRKYCYLHKDTPQVDIRITRCAIVGCDAK
PNFGYESEARRFCADHREDSMINLRSRRCKVTECLKYASCGQPNSAPDTC
GNHKTNGMVNLVGRRCAEEDCETYASYGTVGVRARYCAKHRKENMVNLTV
KQCEHEMCVAQPSFNYKGQRKARFCVKHKHEAMVDVLDRHCKQHGCDRQP
IYGDSNKTAGRPLYCPAHRPNDSFDVKTARCQEENCHKHPSYGYDMDRVR
RRCRLHKLSDMVDVKSPRCETLGCRKQPCCGHLGAKARFCSEHKLHGMVN
LKTRAFRCKHKGPETGESVLMAQLSGRSLLCNRACRFAFPTEPALYCLKH
KMDGMVDVLNPRCSMGDCMEFPTHGYEGDQPTFCMTHMATGMKAIVAQSP
NIMHWSTEARKQAAATARESSRLLNEREAGSAKVTPLPPKTDPDIRRKMQ
EAHASAARTIVAARPIEGLSAGTCPLPPPQEEPTLEELALAFGEASGNPL
HHLDPADPQVATILVGASAAVAAAAAAAVAPFSFGGGMSMQPSPNYGIPP
GTIGGVSGGGLHMAGASMASGYVHMPTHSQPPPVVLSTSSPFPNMFQQQQ
QQQGAVLTMAPPPPAPIDARVVQPLAQPHVHVQGSHGVAAAGPRAFLSTS
AAATPLPALPGIDLNRAGGGGIGAGATAVQANSSVNNYRQTGPGPDAAVV
TGAPVPATGPRFGAGTSAGTVDPGISMSVVTSAPAPTQASEAIFSTPSTA
MLPAAVATSSVVTAPIGTHGTAPASYRLLLSPLASAAAAAPAVVAEGSPP
VIPVVPPITSQAMATPVTVITPDPNQHSAHSAVDKAQPTISVSADASAIV
PALVTAPPGVFNPGKGWTFMPTPAMAEGGAALPHAVVPVSSPPPAADASA
AAMAVVEGRADARSDVSGAICTTPGCTVLATFGHPGPEKGPTHCLTHCED
GMQRLADDEAGSDEQGAKRRVASAPSTSDEAGAHEQSVDEDSSESSRGKR
RKK
back to top