prot_H-paniculata_contig6464.14292.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6464.14292.1
Unique Nameprot_H-paniculata_contig6464.14292.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length346
Homology
BLAST of mRNA_H-paniculata_contig6464.14292.1 vs. uniprot
Match: D8LES9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LES9_ECTSI)

HSP 1 Score: 449 bits (1154), Expect = 2.030e-155
Identity = 229/350 (65.43%), Postives = 274/350 (78.29%), Query Frame = 0
Query:    1 MTSYGEARLMGAPRANLVDDLTQVSGLILAFGCVIAIPAVHDLVGVAAEDVDWNGAEDVFPPILGLLANLTVSVFGLSSIFLGFQYLACKWGSKFGSLVGLAITLAAWFPFLVTIARIIFQADKKTPGG---PLSI--PATS-TDSEFNSIAIMGILGFYGYAGTV-SALTFLHWKMYRYFAGYATTYTASYYRSRLTYYGFLVVMVGVVQIALGSYVQDHYGDGQLSEPVAVGPFFILWPEISIAVGLVQFIYGCMILYRSTTPGVGPSTGNKDQGLFSFQCMAWLLFLISVGCQVMGQVALHVAPTPALFLGNVIGFTIFPIYLDVMAHTTPENVTSDMFSTAKDIGS 343
            MTSYGEARLM +PRANLVDDLT  SGLILA+G ++ I    DL   +A+ VDW+G++ VFPPI  LLA LTV++FGL S+FLGFQY+A +WGSK  SL GL ITLAAWFPFL T+A I FQAD    GG   PL I  P  S +  E NSIA+MGILGF+GYAGTV  ALTFL WKMYR+F G A+TY+A+YYRSRL YYGFL +MVG +Q+ALGS+V+  +G GQL  PV  GPFFILWPE+SI VG+ Q ++G  ILYRSTTPGVGPSTGNKD G+F FQ +AW +FLIS+G QV+GQV+L  +  PALF+ NVIGF +FPIYLDV++HTTPENVT DMFS +K +GS
Sbjct:    1 MTSYGEARLMDSPRANLVDDLTTTSGLILAYGIIVIIGGTVDLTAASAKGVDWSGSDGVFPPIAILLAQLTVTLFGLVSMFLGFQYVASRWGSKVTSLFGLGITLAAWFPFLTTVALIAFQADHGNVGGGAGPLQILHPTISVSQGEINSIALMGILGFWGYAGTVIGALTFLQWKMYRFFQGGASTYSATYYRSRLGYYGFLSLMVGALQVALGSFVEGMFGWGQLPSPVVSGPFFILWPELSITVGVCQVLFGFYILYRSTTPGVGPSTGNKDAGMFKFQVVAWSVFLISMGAQVLGQVSLAASAMPALFIRNVIGFALFPIYLDVLSHTTPENVTPDMFSMSKTVGS 350          
BLAST of mRNA_H-paniculata_contig6464.14292.1 vs. uniprot
Match: A0A836CMW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW6_9STRA)

HSP 1 Score: 192 bits (487), Expect = 8.150e-55
Identity = 122/330 (36.97%), Postives = 179/330 (54.24%), Query Frame = 0
Query:   20 DLTQVSGLILAFGCVIAIPAVHDLVGVAAEDVDWNGAEDVFPPILGLLANLTVSVFGLSSIFLGFQYLACKWGSKFGSLVGLAITLAAWFPFLVTIARIIFQADK----KTPGGPLSIPATSTDSEFNSIAIMGILGFYGY-AGTVSALTFLHWKMYR-YFAGYATTYTASYYRSRLTYYGFLVVMVGVVQIALGSYVQDHYGDGQLSEPVAVGPFFILWPEISIAVGLVQFIYGCMILYRSTTPGVGPSTGNKDQGLFSFQCMAW---LLFLISVGCQVMGQVALHVAPTPALFLGNVI----GFTIFPIYLDVMAHTTPENVTSDMFS 336
            ++ Q +GL + FG +  + A   +  V      W G    FPPI  LLANLT ++FGLS+I +G  +L    GS   S   + IT AAWFPFL  I+ I F  D       P  P+++  T+TD   N++  +  LGF  Y A  V ALTF   K++R +     T YT +YY SR TYYGFL ++ GVVQ+ALG+YVQD++G  +L EP+A GPF + + + SIA+G++    G +++ RS          +KD  + +     W     ++  +  QV+ QVA  VAP PA    + +       +FP+YLD+ + + PE   SD +S
Sbjct:   11 EVRQTAGLAILFGSMAVLSACIGISEVTDIGQKWAGNSLTFPPIALLLANLTQALFGLSNIGVGLAWLVSGKGSVGWSFFSMVITYAAWFPFLTVISLISFTGDNYPQAPQPFIPMTLMPTTTD--VNAVTALAALGFIAYGANLVGALTFCATKLFRAHSVAGVTAYTGAYYASRQTYYGFLTLLAGVVQLALGAYVQDNFGSDRLLEPIAAGPFTVTYSQASIAMGVLVMFQGALLMARSYM--------SKDSKVATGAAFDWWSVFAYVTVLAVQVLTQVA--VAPAPAAGRASTVFETLALAVFPVYLDIKSRSAPEAFPSDFYS 328          
BLAST of mRNA_H-paniculata_contig6464.14292.1 vs. uniprot
Match: K0TGC2_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TGC2_THAOC)

HSP 1 Score: 110 bits (275), Expect = 7.210e-24
Identity = 96/334 (28.74%), Postives = 147/334 (44.01%), Query Frame = 0
Query:    2 TSYGEARLMGAPRANLVDDLTQVSGLILAFGCVIAIPAVHDLVGVAAEDVDWNGAEDVFPPILGLLANLTVSVFGLSSIFLGFQYLACKWGSKFGSLVGLAITLAAWFPFLVTIARI---IFQADKKTPGGPLSIPATSTDSEFNSIAIMGILGFYGYA-GTVSALTFLHWKMYRYFAGYATTYTASYYRSRLTYYGFLVVMVGVVQIALGSYVQDHYGDGQLSEPVAVGPFFILWPEISIAVGLVQFIYGCMILYRSTTPGVGP-STGNKDQGLFSFQCMAWLLFLISVGCQVMGQVALHVAPTPALFLGNVIGFTIFPIYLDVMAHTTPENV 330
            T+   A L  A    L  D    SGL+L  G   A  A  D+V +A  D   +G      P+  L+A +    FGL+ + +GF       GS   + +  +    AW PFLV ++ I   I     + P  P     ++   +F  +  M  LG   YA G +     + + M+   AG     +  Y+R R   Y  L+ + G+VQ+ALGS++ + YG+G L  P+    F +  PEIS+ +GL+Q I   + + RS      P S   +    F + CM  +  L  V  Q  G  A   APT A      +G  + P +LD   +  PE++
Sbjct:    4 TNSSTASLPHAGAERLKADYRMYSGLLLTLGLCAAYGAFADIVSLA--DTAKSGL-----PLATLIAAVFQGFFGLTCMGVGFTGAVMDKGSTLLTTIAASSIQLAWMPFLVGLSTIGMGIVSDPSENPFIPALYDPSAAAVKF--VGSMAFLGLMSYAIGFIXXXXXMSFSMHSIQAGKPQDRSGVYFRGRAKLYNGLLFLAGLVQLALGSFIINTYGNGPLEAPIFAVVFLVFSPEISVTIGLLQMIVSTIGIVRSLREKPAPDSVWFQTLCFFMYFCMMSMQVLAQVA-QAPGDAAASAAPTLACVY---LGIALMPAFLDWKMNNLPEDL 324          
BLAST of mRNA_H-paniculata_contig6464.14292.1 vs. uniprot
Match: A0A7R9WM98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WM98_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.360e-8
Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 0
Query:  189 RLTYYGFLVVMVGVVQIALGSYVQDHYGDGQLSE-PVAVGPFFILWPEISIAVGLVQFIYGCMILYRSTTPGVGPSTGNKDQGLFSFQCMAWLLFLISVGCQVM 291
            RL +Y F +++ G+ Q+ LGS++ D +G G L   PVAV  +FI +PEI+IAVGLVQ +       R    G G   G  +    +FQ   ++ +L+ +  Q+M
Sbjct:    2 RLHFYSFTILLAGLSQLLLGSFLLDRFGSGPLENGPVAVAMYFINFPEIAIAVGLVQVLNAIFGFAR----GFGLWNGKDNH---TFQATLFVQWLMVITFQIM 98          
BLAST of mRNA_H-paniculata_contig6464.14292.1 vs. uniprot
Match: A0A7S3A465_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A465_9RHOD)

HSP 1 Score: 59.3 bits (142), Expect = 2.900e-6
Identity = 66/269 (24.54%), Postives = 111/269 (41.26%), Query Frame = 0
Query:   60 FPPILGLLANLTVSVFGLSSIFLGFQYLACKWGSKFGSL--VGLAITLAAWFPFLVTIAR--IIFQADKKTPGGPLSIPATSTDSEFNSIAIMGILGFYGYAGTVSALTFLHWKMYRYFAGYATTYTASYYRSRLTYYGFLVVMVGVVQIALGSYVQDHYGDGQLSEPVAVGPFFILWPEISIAVGLVQFIYGCMILYRSTTPGVGPSTGNKDQGLFSFQCMAWLLFLISVGCQVMGQVALHVAPTPALFLGNVIGFTIFPIYLDVMAH 324
            F   L L+A     +FGL+   +G   +  + G+KF ++  +GLA  L  WF F V +    I    + +T   PL+I       +F+ +  M + G   +   +    F+   + R       T    Y + RL  +   + + G+V +  GS     YG   L    A  P FI++P ++IA G+VQF++G   +  +         G   + +  F   ++L  L ++              TPA FLG ++  T     L  M H
Sbjct:   62 FSETLRLVAACGEVLFGLAGFLMGIALILFRQGNKFVTISWMGLAFVLG-WFVFSVWVLAFPIWNLVNVRTAPEPLTI------QQFDLLRTMSLFGGIFWCFALQGGQFMVGNVIRGHQDQGKTRGEKYAQIRLIMWSLNIALSGIVFVIAGSVASVAYGAVLLDPVQAFPPIFIVYPGLTIAAGIVQFLFGTFAISAAIM-------GRMFKTVTLFAAFSYLFSLATI------------VWTPA-FLGGIVPATTLLAGLCTMIH 303          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6464.14292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LES9_ECTSI2.030e-15565.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CMW6_9STRA8.150e-5536.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K0TGC2_THAOC7.210e-2428.74Uncharacterized protein n=2 Tax=Thalassiosira ocea... [more]
A0A7R9WM98_9STRA1.360e-836.54Hypothetical protein (Fragment) n=1 Tax=Craspedost... [more]
A0A7S3A465_9RHOD2.900e-624.54Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..169
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 231..253
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 274..296
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 190..211
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 320..345
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 254..273
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 212..230
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 302..319
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 297..301
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..40
NoneNo IPR availableTMHMMTMhelixcoord: 231..253
NoneNo IPR availableTMHMMTMhelixcoord: 26..48
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 146..168
NoneNo IPR availableTMHMMTMhelixcoord: 297..319
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 189..211
NoneNo IPR availableTMHMMTMhelixcoord: 270..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6464contigH-paniculata_contig6464:2371..7705 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6464.14292.1mRNA_H-paniculata_contig6464.14292.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6464 1652..7909 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6464.14292.1 ID=prot_H-paniculata_contig6464.14292.1|Name=mRNA_H-paniculata_contig6464.14292.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=346bp
MTSYGEARLMGAPRANLVDDLTQVSGLILAFGCVIAIPAVHDLVGVAAED
VDWNGAEDVFPPILGLLANLTVSVFGLSSIFLGFQYLACKWGSKFGSLVG
LAITLAAWFPFLVTIARIIFQADKKTPGGPLSIPATSTDSEFNSIAIMGI
LGFYGYAGTVSALTFLHWKMYRYFAGYATTYTASYYRSRLTYYGFLVVMV
GVVQIALGSYVQDHYGDGQLSEPVAVGPFFILWPEISIAVGLVQFIYGCM
ILYRSTTPGVGPSTGNKDQGLFSFQCMAWLLFLISVGCQVMGQVALHVAP
TPALFLGNVIGFTIFPIYLDVMAHTTPENVTSDMFSTAKDIGSTV*
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