prot_H-paniculata_contig644.14254.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig644.14254.1
Unique Name	prot_H-paniculata_contig644.14254.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	587

Homology

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BLAST of mRNA_H-paniculata_contig644.14254.1 vs. uniprot
Match: D7FK49_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK49_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 9.020e-78
Identity = 180/404 (44.55%), Postives = 217/404 (53.71%), Query Frame = 0

Query:    1 ETGAIVDEHADTWGFSWMPAIEEFVEQAAAVAQEEADCSSAHETPTDEGDEKEAAGDAGGVPGRWQSSVEGAVGNPASVS------FKEVRARGRCGDDRAWRRKYPRNRKRMRSSGGSDGNVSKGQPPPPSYNEILLADKSFHNPHGWETMASAFGIIRPVSFMLEVADDDRTWGGPATAAMTTGDRRGEQGVPKKDVAVEEDEEREKGSQSWFYDTVRDRQNRLWADTRIKKGVELARKGQHQLAIDTYSQALGMCPDHEDGLVARGAAFATMXXXXXXXXXXXXXXXXXXNNENASSYLKETRRRMDRQDAKVSPSPSVSSTGGQARDHGLKPWDTSSRDRSRVARSADSAGLLGGXXXXXSTLSSSQGNGSDETSRSVLAALIHDGVEGDTLRKMKLLLE 398
            + GA V+EHADTWGFSWMPAIE+FVEQAA  AQ++        +P       +       + G   ++   +  +P S S                                               P PPSYNE LLADKSFHNPH  ETMA AFGI+RP SF+L+V +DDR WGG A  A         +G  + DV        +   Q+WFYDTVRDRQNRLWADTR++KGVELARKGQHQ AIDTY+QALGMCPDH+DGLVARGAAFAT                    N NASSYLKETRRRM+RQ+A+ +P    S+T G       +   T S    R+  +  SA   GG     S + S+     DE S + L AL+HDG EGD LRKM+ LLE
Sbjct:   60 DAGASVNEHADTWGFSWMPAIEDFVEQAAE-AQQQNXXXXXESSPLGANYRSDTDXXXXXLRGPPTNTSRSSFCDPTSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRPPSYNETLLADKSFHNPHASETMADAFGILRPASFVLDVGEDDRPWGGAAGVAAAGAKGATAEGG-EADVTTGHGGSED---QNWFYDTVRDRQNRLWADTRVRKGVELARKGQHQAAIDTYTQALGMCPDHDDGLVARGAAFATTGRLRQAVQDLSRALSVNPQNGNASSYLKETRRRMERQEARETPG--ASATTGNTTTFESR---TDSIVNGRMGLNCVSA--AGGAVMPASVMPSAGSTERDEASEAALGALLHDGAEGDALRKMRALLE 451

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BLAST of mRNA_H-paniculata_contig644.14254.1 vs. uniprot
Match: A0A836CKS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKS1_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.700e-13
Identity = 44/114 (38.60%), Postives = 57/114 (50.00%), Query Frame = 0

Query:  146 MASAFGIIRPVSFMLEVADDDRTWGGPATAAMTTGDRRGEQGVPKKDVAVEEDEEREKGSQSWFYDTVRDRQNRLWADTRIKKGVELARKGQHQLAIDTYSQALGMCPDHEDGL 259
            MASAF + RP+SF ++VA D                                      G++ WF++ +R+RQ+R WADTR+ KG ELAR GQH  AI  Y QALGMC  H D +
Sbjct:    1 MASAFRVCRPLSFAVDVAADGA------------------------------------GARDWFFEDLRERQDRTWADTRVAKGAELARSGQHAAAIKYYDQALGMCAGHVDAV 78

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig644.14254.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig644.14254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FK49_ECTSI	9.020e-78	44.55	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CKS1_9STRA	3.700e-13	38.60	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 256..289 e-value: 0.0011 score: 28.3 coord: 222..255 e-value: 0.031 score: 23.4
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 256..289 score: 10.915
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 222..255 score: 8.467
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 210..307 e-value: 2.2E-15 score: 58.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 218..308
IPR039190	Tetratricopeptide repeat protein 14	PANTHER	PTHR23184	FAMILY NOT NAMED	coord: 124..306
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 222..289 score: 18.356

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig644	contig	H-paniculata_contig644:17653..20630 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig644.14254.1	mRNA_H-paniculata_contig644.14254.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig644 17653..20630 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig644.14254.1 ID=prot_H-paniculata_contig644.14254.1|Name=mRNA_H-paniculata_contig644.14254.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=587bp
ETGAIVDEHADTWGFSWMPAIEEFVEQAAAVAQEEADCSSAHETPTDEGD
EKEAAGDAGGVPGRWQSSVEGAVGNPASVSFKEVRARGRCGDDRAWRRKY
PRNRKRMRSSGGSDGNVSKGQPPPPSYNEILLADKSFHNPHGWETMASAF
GIIRPVSFMLEVADDDRTWGGPATAAMTTGDRRGEQGVPKKDVAVEEDEE
REKGSQSWFYDTVRDRQNRLWADTRIKKGVELARKGQHQLAIDTYSQALG
MCPDHEDGLVARGAAFATMGRLRQALQDLSRALSLNPNNENASSYLKETR
RRMDRQDAKVSPSPSVSSTGGQARDHGLKPWDTSSRDRSRVARSADSAGL
LGGGGGAGSTLSSSQGNGSDETSRSVLAALIHDGVEGDTLRKMKLLLEED
ERTRKQRRRKSVGGAGEGRGRGDEGASSSSSDGGGSGSLDSSTNNRGRHI
SAKKKTHKKSKKSSKSSRRSSSHHHKKNKDRGRRRDSSAGHGSSSDEDGA
GGGGGAAGRTSNSSATNKHKKKKKRRSSSSAHKKKRHSRGVDTDGIRSMS
PPPRAAAVAGSSSGGEGSGGDAVHPILQRKKHSLWG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf
IPR039190	TTC14
IPR013026	TPR-contain_dom