prot_H-paniculata_contig64349.14246.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig64349.14246.1
Unique Nameprot_H-paniculata_contig64349.14246.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length137
Homology
BLAST of mRNA_H-paniculata_contig64349.14246.1 vs. uniprot
Match: A0A151ITN2_9HYME (Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151ITN2_9HYME)

HSP 1 Score: 53.9 bits (128), Expect = 1.030e-5
Identity = 36/136 (26.47%), Postives = 61/136 (44.85%), Query Frame = 0
Query:    3 QRDCPNVYCRRCGKRGHDLYTC-PQIADEDACLAEAEMEVELEEALKVDLGEDEFIAAYIASTSTTGKEEVLSVDSEGLEYRKVGGTEIWMCDNGATKHMTHDSDFLFNYQEC-DGHVRLADGNRLPIEGVGMLFL 136
            +R    + C  C K GH +  C  +  DED  +   E +   E                 ++T      EV+  +   LE +     ++W+ D+GA++HMTH S+++ N Q   D HV L DG +  + G G +++
Sbjct:  221 ERSKKEIECFYCHKLGHYIKDCRKKRRDEDQGIRSKEKQKNNE-----------------SNTEAAFSAEVIEKEILNLEVK-----DVWILDSGASRHMTHRSNWISNLQTYKDEHVSLGDGTKCKVHGRGTVYI 334          
BLAST of mRNA_H-paniculata_contig64349.14246.1 vs. uniprot
Match: A0A078IEY1_BRANA (BnaCnng15440D protein n=2 Tax=Brassica TaxID=3705 RepID=A0A078IEY1_BRANA)

HSP 1 Score: 50.8 bits (120), Expect = 1.190e-5
Identity = 25/84 (29.76%), Postives = 47/84 (55.95%), Query Frame = 0
Query:   56 FIAAYIASTSTTGKEEVLSVDSEGLEYRKVGGTEIW-------MCDNGATKHMTHDSDFLFNYQECDGHVRLADGNRLPIEGVG 132
            F +AY A++  +   ++L +    ++  +  GTEI        + D GA+ HM  D++ + + +   GHV +A+G+R+PI G+G
Sbjct:    2 FKSAYTATSEPSITSKMLGLLGNLIKQNEPSGTEITRNMHKPLIIDYGASHHMISDNNLIKDIEPAHGHVMIANGDRIPIRGIG 85          
BLAST of mRNA_H-paniculata_contig64349.14246.1 vs. uniprot
Match: A0A178U605_ARATH (ULP_PROTEASE domain-containing protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A178U605_ARATH)

HSP 1 Score: 51.6 bits (122), Expect = 7.250e-5
Identity = 22/65 (33.85%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   72 VLSVDSEGLEYRKVGGTEIWMCDNGATKHMTHDSDFLFNYQECDGHVRLADGNRLPIEGVGMLFL 136
            ++S+   G+ +     +   + D+GA+ HM  +S+ L N +   GHV +A+G+++PIEG+G L L
Sbjct:  323 IVSLKESGITFSSQTSSSSIVIDSGASHHMISNSNLLDNIEPALGHVIIANGDKVPIEGIGNLKL 387          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig64349.14246.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A151ITN2_9HYME1.030e-526.47Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=... [more]
A0A078IEY1_BRANA1.190e-529.76BnaCnng15440D protein n=2 Tax=Brassica TaxID=3705 ... [more]
A0A178U605_ARATH7.250e-533.85ULP_PROTEASE domain-containing protein n=1 Tax=Ara... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 11..26
score: 8.812

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig64349contigH-paniculata_contig64349:163..573 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig64349.14246.1mRNA_H-paniculata_contig64349.14246.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig64349 163..573 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig64349.14246.1 ID=prot_H-paniculata_contig64349.14246.1|Name=mRNA_H-paniculata_contig64349.14246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=137bp
HLQRDCPNVYCRRCGKRGHDLYTCPQIADEDACLAEAEMEVELEEALKVD
LGEDEFIAAYIASTSTTGKEEVLSVDSEGLEYRKVGGTEIWMCDNGATKH
MTHDSDFLFNYQECDGHVRLADGNRLPIEGVGMLFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC