prot_H-paniculata_contig6433.14244.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6433.14244.1
Unique Nameprot_H-paniculata_contig6433.14244.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length489
Homology
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BLAST of mRNA_H-paniculata_contig6433.14244.1 vs. uniprot
Match: D8LRX6_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRX6_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 9.720e-23
Identity = 175/332 (52.71%), Postives = 202/332 (60.84%), Query Frame = 0 
Query:    9 DLHSAAKQDDVPTVARLLKEESNINKRDPYGYTALHWGCQKGHTHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSAKDMRGRSVATVCEMGLYDVDESVKIKIMDLLTSAPDLPGSAPPPLKTDKPITASNAKNAALPANSHDTPVISTTAADANLSPAPGASVATIGA------------------------------TAAEESSVFVMWDNVDGETTAPLAQGKDGGQDGLDAEDALWQDIWVALHVPDPDDPDNNLYTEVKTLRKDVQRLKR--SEAGSN 308
            DLHSAAKQDD+  V +LL+E + I+KRDPYGYT L           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Q+A D+RGR+ A VC+MGLYDVD+SVK +I+ LL +        PP  + + P TAS A   A+ A                     GA+    GA                                A E+ VF +WD   G        G    +D  D EDA W ++W  LHVPDPD+PDNNLY+EVKTLR DV+RL+   +E  SN
Sbjct:   10 DLHSAAKQDDIMAVVKLLEEGAPIDKRDPYGYTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAATDLRGRTSAAVCDMGLYDVDQSVKDRIIQLLKN--------PPVRQLEAPPTASPAS--AMLALPXXXXXXXXXXXXXXXXXXXGANPGLQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAVENGVFALWDTSLGPGAGDAGPGGMIDKDWTDPEDAAWNEMWAMLHVPDPDNPDNNLYSEVKTLRHDVKRLRSDLNETASN 331
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6433.14244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRX6_ECTSI9.720e-2352.71Chain A, Crystal Structure Of A Designed Full Cons... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 430..457
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 91..192
coord: 7..140
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 120..134
score: 45.53
coord: 72..87
score: 44.51
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 71..100
e-value: 2.5E-5
score: 33.7
coord: 38..67
e-value: 3.4E-6
score: 36.6
coord: 104..133
e-value: 2.4E-5
score: 33.8
coord: 5..34
e-value: 110.0
score: 11.6
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 106..135
e-value: 2.8E-5
score: 24.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 104..136
score: 12.983
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 71..103
score: 13.197
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 38..70
score: 13.758
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 3..194
e-value: 3.1E-48
score: 166.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 8..144
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 10..100
e-value: 5.4E-17
score: 62.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 10..140
score: 43.131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6433contigH-paniculata_contig6433:3553..10165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6433.14244.1mRNA_H-paniculata_contig6433.14244.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6433 3374..11220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6433.14244.1 ID=prot_H-paniculata_contig6433.14244.1|Name=mRNA_H-paniculata_contig6433.14244.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=489bp
MMSDFELNDLHSAAKQDDVPTVARLLKEESNINKRDPYGYTALHWGCQKG
HTHVVQALLGAGANVNLRDKWRRTPLHRAAKEGHLEIVTALLDSGAEVNA
PGDSNWTPLHCSSFHGQVEIVKLLLQHGADQSAKDMRGRSVATVCEMGLY
DVDESVKIKIMDLLTSAPDLPGSAPPPLKTDKPITASNAKNAALPANSHD
TPVISTTAADANLSPAPGASVATIGATAAEESSVFVMWDNVDGETTAPLA
QGKDGGQDGLDAEDALWQDIWVALHVPDPDDPDNNLYTEVKTLRKDVQRL
KRSEAGSNLTDMMCQTTTSTGTSEAAITTTRATGTTVSELPLPLGSDDDS
NKRLRLDNDGSTSAAKTNRDCNSSSSRPVVNVFGGGPTTAAAVVREGLGA
SELLLVQQNSRLHDCGGGDTREANISAMGEEQLREELRTKMELAAELTKQ
VQAIQQRLVAAGMGIVGTTAVTPNADAAVMTGVVSRSI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom