prot_H-paniculata_contig64260.14235.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig64260.14235.1
Unique Nameprot_H-paniculata_contig64260.14235.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length168
Homology
BLAST of mRNA_H-paniculata_contig64260.14235.1 vs. uniprot
Match: Q967L5_AEDAE (Uncharacterized protein n=1 Tax=Aedes aegypti TaxID=7159 RepID=Q967L5_AEDAE)

HSP 1 Score: 87.0 bits (214), Expect = 8.760e-17
Identity = 58/171 (33.92%), Postives = 84/171 (49.12%), Query Frame = 0
Query:    1 ETRVCFQCNEPGHLKMNCPQRICPICKRIGHGESSHRLSAMFSSDGFRDIVEHGFMARVAG--QGEFASFWVADSGATAHMTPCNELMFDYETCNNLFVTVANGETLPIEGYGKMLVWTKDRG-EIHKFSLSRVAYVPGLDTNLFSLQIVVNQGLTVCLKEEGAAIALPNG 168
            ETRVCF C +PGHL+ NC + +    K+  +  SS        SD  +    H     +A    GE A  W+ DSGA+AHMT        +E     ++T+A+G+   I G G  ++   D   E+ +  +S V YVPGL TNL S++ +  + L V    +G  I  P G
Sbjct:  208 ETRVCFYCKKPGHLQRNCRKLL--EAKKEENNTSSSGTKPK-KSDSVKAKAVHSDTRGIAFVVNGENARSWIIDSGASAHMTCDKSFFITFEESCGGYITLADGKKTQILGEGAGVLHGIDGDDEVIRIDISGVKYVPGLSTNLISVEKLAQKKLDVSFNSDGCRIIDPKG 375          
BLAST of mRNA_H-paniculata_contig64260.14235.1 vs. uniprot
Match: A0A1W7R602_AEDAL (Putative copia-2 aa-i (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R602_AEDAL)

HSP 1 Score: 86.3 bits (212), Expect = 9.880e-17
Identity = 56/169 (33.14%), Postives = 77/169 (45.56%), Query Frame = 0
Query:    1 ETRVCFQCNEPGHLKMNCPQRICPICKRIGHGESSHRLSAMFSSDGFRDIVEHGFMARVAGQGEFASFWVADSGATAHMTPCNELMFDYETCNNLFVTVANGETLPIEGYGKMLVWTKD-RGEIHKFSLSRVAYVPGLDTNLFSLQIVVNQGLTVCLKEEGAAIALPNG 168
            ++RVCF C +PGHLK NC Q +   C ++ +   S +     +       V  G +A + G GE A  W  DSGAT HMT         E      V +A+GE   + G G+      D  GE  +  L  V +VPGL + L S+  +  +G  V     G  I  PNG
Sbjct:  219 DSRVCFYCKQPGHLKRNCRQFL-KECNKVENSTQSKKEDKSKAKASQAQSVSDGPLAWMVGYGEPAD-WYVDSGATRHMTGNRRFFSKLEEAKFASVILADGEKSEVRGVGEGRFHVIDGNGEAVEVMLHDVLFVPGLTSGLISVSALSKKGFGVVFNGSGCEIRRPNG 385          
BLAST of mRNA_H-paniculata_contig64260.14235.1 vs. uniprot
Match: A0A225UGS0_9STRA (Integrase, catalytic core protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UGS0_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.520e-11
Identity = 45/160 (28.12%), Postives = 79/160 (49.38%), Query Frame = 0
Query:    5 CFQCNEPGHLKMNCPQRICPICKRIGHGESSHRLSAMFSSDGFRDIVEHGFMARVAGQGEFASFWVADSGATAHMTPCNELMFDYETCN-NLFVTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAYVPGLDTNLFSLQIVVNQGLTVCLKEEGAAI 163
            CF C + GH+K +CP ++        +G+S+         D    I E           + ++ W+ DSGATAHMTP  + +F+Y   + +++VT+A+G+ + + G G + +   D   I    +  V Y+PGLD  L S+  +  +G++V  +     I
Sbjct:  208 CFNCGQAGHMKRDCPVKV--------NGDSN--------DDSVFAIGE-----------DRSAEWLIDSGATAHMTPHRDDLFEYSAMSKDMYVTIADGKKIRVAGTGSVRLTGIDAKSIR---MVEVLYIPGLDRRLLSVGKLAERGMSVEFQRNSCVI 337          
BLAST of mRNA_H-paniculata_contig64260.14235.1 vs. uniprot
Match: A0A8D8KT35_CULPI (Copia protein n=6 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8KT35_CULPI)

HSP 1 Score: 71.2 bits (173), Expect = 2.520e-11
Identity = 52/161 (32.30%), Postives = 76/161 (47.20%), Query Frame = 0
Query:    4 VCFQCNEPGHLKMNCPQRICPICKRIGHGESSHRLSAMFSSDGFRDIVEHGFMARVAGQGEFASFWVADSGATAHMTPCNELMFDYETCNNLFVTVANGETLPIEGYGK-MLVWTKDRGEIHKFSLSRVAYVPGLDTNLFSLQIVVNQGLTVCLKEEGAAI 163
            VC+ C EPGH K+NCP+      K  G G +  + +    SD  R +    F   V    E  + WV DSGA+AHMT            +   +T+ANG    I G G   +V      +  K S+S V +VPGL T+L S+  +  +  +V   ++G +I
Sbjct:  213 VCYNCGEPGHFKVNCPELAEDQRKSAGGGNAKAKAA---QSDA-RCVA---FTTGV----ERNARWVIDSGASAHMTNDRSFFTSLSEFDGGGITLANGTKTAICGVGSGEVVGIDGEAQPVKISISEVKFVPGLTTSLISVGKLAEKDFSVVFDKKGCSI 362          
BLAST of mRNA_H-paniculata_contig64260.14235.1 vs. uniprot
Match: A0A6A3I090_9STRA (CCHC-type domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3I090_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.320e-11
Identity = 48/160 (30.00%), Postives = 73/160 (45.62%), Query Frame = 0
Query:    5 CFQCNEPGHLKMNCPQRICPICKRIGHGESSHRLSAMFSSDGFRDIVEHGFMARVAGQGEFASFWVADSGATAHMTPCNELMFDYETCNNLF-VTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAYVPGLDTNLFSLQIVVNQGLTVCLKEEGAAI 163
            CF+CN+PGH+K +CP+R                     ++ G  D V      R+ G       W+ DSGATAHMTP    + +YE  +    VT+A+G+   + G G  L+   D+  I    +  V ++ GLD  L S+  +  +GL V  +     I
Sbjct:  223 CFKCNQPGHMKRDCPER---------------------NAGGDDDAVFAVGTERLNG-------WLIDSGATAHMTPHRSDLLEYEALDTTMEVTIADGKKFTVAGRGTALLLGLDQNRI---KMVDVLHISGLDRRLLSVGKLAERGLNVEFQRSSCVI 351          
BLAST of mRNA_H-paniculata_contig64260.14235.1 vs. uniprot
Match: A0A6G0QKW0_9STRA (CCHC-type domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0QKW0_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.320e-11
Identity = 48/160 (30.00%), Postives = 73/160 (45.62%), Query Frame = 0
Query:    5 CFQCNEPGHLKMNCPQRICPICKRIGHGESSHRLSAMFSSDGFRDIVEHGFMARVAGQGEFASFWVADSGATAHMTPCNELMFDYETCNNLF-VTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAYVPGLDTNLFSLQIVVNQGLTVCLKEEGAAI 163
            CF+CN+PGH+K +CP+R                     ++ G  D V      R+ G       W+ DSGATAHMTP    + +YE  +    VT+A+G+   + G G  L+   D+  I    +  V ++ GLD  L S+  +  +GL V  +     I
Sbjct:  223 CFKCNQPGHMKRDCPER---------------------NAGGDDDAVFAVGTERLNG-------WLIDSGATAHMTPHRSDLLEYEALDTTMEVTIADGKKFTVAGRGTALLLGLDQNRI---KMVDVLHISGLDRRLLSVGKLAERGLNVEFQRSSCVI 351          
BLAST of mRNA_H-paniculata_contig64260.14235.1 vs. uniprot
Match: H3H5K9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5K9_PHYRM)

HSP 1 Score: 69.7 bits (169), Expect = 7.990e-11
Identity = 49/160 (30.63%), Postives = 74/160 (46.25%), Query Frame = 0
Query:    5 CFQCNEPGHLKMNCPQRICPICKRIGHGESSHRLSAMFSSDGFRDIVEHGFMARVAGQGEFASFWVADSGATAHMTPCNELMFDYETCN-NLFVTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAYVPGLDTNLFSLQIVVNQGLTVCLKEEGAAI 163
            CF+CN+PGH+K +CP R                     ++ G  D V      R  G       W+ DSGATAHMTP    + +YE  +  + VT+A+G+ L + G G + +   D+  I    +  V ++PGLD  L S+  +  +GL V  +     I
Sbjct:  223 CFKCNQPGHMKRDCPVR---------------------NTGGDDDAVFAVGTERFNG-------WLIDSGATAHMTPHRSDLVEYEALDAGMEVTIADGKKLAVAGRGTVRLLGLDQKTI---KMVDVLHIPGLDRRLLSVGKLAERGLNVEFQRSSCVI 351          
BLAST of mRNA_H-paniculata_contig64260.14235.1 vs. uniprot
Match: A0A6A3X5U6_9STRA (CCHC-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3X5U6_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.000e-10
Identity = 47/160 (29.38%), Postives = 77/160 (48.12%), Query Frame = 0
Query:    5 CFQCNEPGHLKMNCPQRICPICKRIGHGESSHRLSAMFSSDGFRDIVEHGFMARVAGQGEFASFWVADSGATAHMTPCNELMFDYETCN-NLFVTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAYVPGLDTNLFSLQIVVNQGLTVCLKEEGAAI 163
            CF C + GH+K +CP+           G+    + A+  S             R AG       W+ DSGATAHMTP    +F+Y+  + N+ VT+A+G+ + + G G + +   D   I       V Y+PGLD  L S++ +  +G++V  +++   I
Sbjct:  230 CFNCGQMGHMKRDCPEP--------NAGKDDDAVFAVGKS-------------RSAG-------WLIDSGATAHMTPHRNDLFEYKDLDSNIEVTIADGKKIRVVGTGSVRLTGIDGKRIKMID---VLYIPGLDRQLLSVRRLAERGMSVEFQKKSCTI 358          
BLAST of mRNA_H-paniculata_contig64260.14235.1 vs. uniprot
Match: A0A329SN38_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SN38_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.680e-10
Identity = 46/160 (28.75%), Postives = 76/160 (47.50%), Query Frame = 0
Query:    5 CFQCNEPGHLKMNCPQRICPICKRIGHGESSHRLSAMFSSDGFRDIVEHGFMARVAGQGEFASFWVADSGATAHMTPCNELMFDYETCN-NLFVTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAYVPGLDTNLFSLQIVVNQGLTVCLKEEGAAI 163
            C+ C++ GH+K +CP               S+   A+F+                 G+G  A  W+ DSGATAHMTP    +F+YE    N+ VT+A+G+ + + G G + +   D   I    +  V ++PGLD  L S+  +  +G++V  ++    I
Sbjct:  227 CYNCDQIGHMKRDCPS-----------SNVSNDEEAVFA----------------VGKGRSAG-WLIDSGATAHMTPHRNDLFEYEDLEENIEVTIADGKKIRVVGTGSVRLMGIDGKRI---KMVEVLHIPGLDRRLLSVGKLAERGMSVEFQQNSCVI 355          
BLAST of mRNA_H-paniculata_contig64260.14235.1 vs. uniprot
Match: A0A3M6VPY8_9STRA (CCHC-type domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPY8_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.750e-10
Identity = 46/151 (30.46%), Postives = 71/151 (47.02%), Query Frame = 0
Query:    5 CFQCNEPGHLKMNCPQRICPICKRIGHGESSHRLSAMFSSDGFRDIVEHGFMARVAGQGEFASFWVADSGATAHMTPCNELMFDYETC-NNLFVTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAYVPGLDTNLFSLQIVVNQGLTV 154
            CF C++ GH+K  CP            G   +   A+F++   R                 +S W+ DSGATAHMTP  E +FDY+    ++ VT+A+G+ + + G G + +   D   I       V ++PGLD  L S+  +  +GL V
Sbjct:  122 CFNCDKFGHMKRECPDF---------KGPGKNEEDAVFAAGESR-----------------SSGWLIDSGATAHMTPHREDLFDYKNLVTSIEVTIADGKKIRVVGTGSVRLTGIDGKRIRMLD---VLHIPGLDRRLLSVGKLAERGLNV 243          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig64260.14235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q967L5_AEDAE8.760e-1733.92Uncharacterized protein n=1 Tax=Aedes aegypti TaxI... [more]
A0A1W7R602_AEDAL9.880e-1733.14Putative copia-2 aa-i (Fragment) n=1 Tax=Aedes alb... [more]
A0A225UGS0_9STRA2.520e-1128.13Integrase, catalytic core protein (Fragment) n=1 T... [more]
A0A8D8KT35_CULPI2.520e-1132.30Copia protein n=6 Tax=Culex pipiens TaxID=7175 Rep... [more]
A0A6A3I090_9STRA4.320e-1130.00CCHC-type domain-containing protein n=8 Tax=Phytop... [more]
A0A6G0QKW0_9STRA4.320e-1130.00CCHC-type domain-containing protein n=2 Tax=Phytop... [more]
H3H5K9_PHYRM7.990e-1130.63Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A3X5U6_9STRA2.000e-1029.38CCHC-type domain-containing protein n=5 Tax=Phytop... [more]
A0A329SN38_9STRA3.680e-1028.75Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A3M6VPY8_9STRA3.750e-1030.46CCHC-type domain-containing protein n=1 Tax=Perono... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 4..20
e-value: 0.002
score: 27.4
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 3..20
e-value: 2.0E-4
score: 21.3
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 5..20
score: 9.851
NoneNo IPR availableGENE3D4.10.60.10coord: 1..36
e-value: 2.6E-6
score: 29.1
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 3..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig64260contigH-paniculata_contig64260:232..789 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig64260.14235.1mRNA_H-paniculata_contig64260.14235.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig64260 232..789 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig64260.14235.1 ID=prot_H-paniculata_contig64260.14235.1|Name=mRNA_H-paniculata_contig64260.14235.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp
ETRVCFQCNEPGHLKMNCPQRICPICKRIGHGESSHRLSAMFSSDGFRDI
VEHGFMARVAGQGEFASFWVADSGATAHMTPCNELMFDYETCNNLFVTVA
NGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAYVPGLDTNLFSLQIVVNQ
GLTVCLKEEGAAIALPNG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf