prot_H-paniculata_contig64024.14214.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig64024.14214.1
Unique Nameprot_H-paniculata_contig64024.14214.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length135
Homology
BLAST of mRNA_H-paniculata_contig64024.14214.1 vs. uniprot
Match: A0A6H5L269_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L269_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 3.820e-48
Identity = 85/129 (65.89%), Postives = 99/129 (76.74%), Query Frame = 0
Query:    1 TRPFQLTTDACKHSLGAVLEQLQADNTLRPLVYISRTTDNNEKNWDAMDLECAALVWAIKKLRVFLYGMKLDAFTDLEPLLNYISLSEKKPKVQRMCDILSQFQFNLRYIPGKRNQLADALSRLPIPAT 129
            TR F+LTTDA     GAVLEQ Q D T+RPLVYISR+T  NE NWD   LEC ALVWAI+KLRV+LYG+  +AFTD +PLL++IS+ EKKP+VQRMCD LS + F L Y  GK NQ+ADALSRLP P T
Sbjct:  373 TRKFRLTTDASISGFGAVLEQPQEDGTVRPLVYISRSTLPNEANWDVSSLECGALVWAIRKLRVYLYGIPFEAFTDHQPLLSFISMGEKKPRVQRMCDFLSAYSFTLSYRKGKENQVADALSRLPQPPT 501          
BLAST of mRNA_H-paniculata_contig64024.14214.1 vs. uniprot
Match: A0A6H5KJH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH5_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 5.450e-46
Identity = 82/131 (62.60%), Postives = 99/131 (75.57%), Query Frame = 0
Query:    1 TRPFQLTTDACKHSLGAVLEQLQADNTLRPLVYISRTTDNNEKNWDAMDLECAALVWAIKKLRVFLYGMKLDAFTDLEPLLNYISLSEKKPKVQRMCDILSQFQFNLRYIPGKRNQLADALSRLPIPATEE 131
            TR F+LTTDA     GAVLEQ + D T+RPLVYISR+T  NE NWD   LEC ALVWAI+KLRV+LYG+  +AFTD +PLL++IS+ EKKP+VQ MCD L+ + F L Y  GK NQ+ADALSRLP P T +
Sbjct:  224 TRKFRLTTDASISGSGAVLEQPRDDGTVRPLVYISRSTLPNEANWDVSSLECGALVWAIRKLRVYLYGIPFEAFTDHQPLLSFISMGEKKPRVQHMCDFLTAYSFTLSYRKGKDNQVADALSRLPQPPTAD 354          
BLAST of mRNA_H-paniculata_contig64024.14214.1 vs. uniprot
Match: A0A6H5KKY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY6_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 1.570e-43
Identity = 77/130 (59.23%), Postives = 96/130 (73.85%), Query Frame = 0
Query:    1 TRPFQLTTDACKHSLGAVLEQLQADNTLRPLVYISRTTDNNEKNWDAMDLECAALVWAIKKLRVFLYGMKLDAFTDLEPLLNYISLSEKKPKVQRMCDILSQFQFNLRYIPGKRNQLADALSRLPIPATE 130
            +RPFQL++DA  H +GAV+EQ + D T+RPLVY+SR+T  NE+NWD  DL   AL W +KKLRV+ YG+     TD +PL  Y+SLSEKKP+V  MCD LS +QF+LRY  G  NQ+AD LSRLP PATE
Sbjct: 1282 SRPFQLSSDASVHGVGAVVEQQRNDGTMRPLVYVSRSTLPNERNWDTADLGMGALFWVVKKLRVYSYGIPFVVHTDHQPLTAYLSLSEKKPRVHGMCDFLSSYQFSLRYKKGNDNQVADMLSRLPQPATE 1411          
BLAST of mRNA_H-paniculata_contig64024.14214.1 vs. uniprot
Match: A0A6H5KPU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPU9_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 1.770e-37
Identity = 72/118 (61.02%), Postives = 87/118 (73.73%), Query Frame = 0
Query:   17 AVLEQLQADNTLRPLVYISRTTDNNEKNWDAMDLECAALVWAIKKLRVFLYGMKLDAFTDLEPLLNYISLSEKKPKVQRMCDILSQFQFNLRYIPGKRNQLADALSRLPIPATEEGEN 134
            AVLEQ Q D T+RPLVY+SR+T  NE NWD  DLE  ALVWA+KKLRV+LYG+     TD +PL +Y+SLSEKK +V RMCD LS +QF+LRY  G  NQ AD L RLP  AT++ E+
Sbjct:   96 AVLEQQQRDGTMRPLVYVSRSTLPNECNWDTTDLEMGALVWAVKKLRVYLYGIPFVVHTDHQPLTSYLSLSEKKLRVHRMCDFLSSYQFSLRYKKGNDNQAADMLFRLPQSATDKYES 213          
BLAST of mRNA_H-paniculata_contig64024.14214.1 vs. uniprot
Match: A0A6H5KRW3_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW3_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 2.710e-35
Identity = 68/130 (52.31%), Postives = 86/130 (66.15%), Query Frame = 0
Query:    2 RPFQLTTDACKHSLGAVLEQLQADNTLRPLVYISRTTDNNEKNWDAMDLECAALVWAIKKLRVFLYGMKLDAFTDLEPLLNYISLSEKKPKVQRMCDILSQFQFNLRYIPGKRNQLADALSRLPIPATEE 131
            R F+L TDA    LGAV+EQ Q D T+RPL Y+SR+T  NE+ W A +LEC A+VWAIKK R   YG+    ++D +PL N  SL+EK  +VQR  D LS + + L Y PGK N  AD +SRLP+P  EE
Sbjct:  279 RKFRLITDASISGLGAVIEQEQEDGTVRPLCYLSRSTYPNERRWSATELECGAIVWAIKKNRTLFYGIPFQIYSDHQPLRNLESLAEKNNRVQRWFDFLSAYTYELIYRPGKANGNADCMSRLPLPPMEE 408          
BLAST of mRNA_H-paniculata_contig64024.14214.1 vs. uniprot
Match: A0A6H5JG96_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG96_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.270e-30
Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = 0
Query:    1 TRPFQLTTDACKHSLGAVLEQLQADNTLRPLVYISRTTDNNEKNWDAMDLECAALVWAIKKLRVFLYGMKLDAFTDLEPLLNYISLSEKKPKVQRMCDILSQFQFNLRYIPGKRNQLADALSRLPIPATEE 131
            TRP +L  DA    LGA+LEQ QAD ++RP+V+ISR+T + E+NW  +DLE  A+VWAIK+LR +L G     +T  + L N   + +  P VQR  + L+ +Q+ L++ PG  N   D LSRLP+P T +
Sbjct:  176 TRPLRLHCDARLDGLGAILEQEQADGSVRPIVFISRSTLDAERNWTPLDLEAGAIVWAIKRLRGYLRGTHFQIWTGNQALENISKVGDHSPSVQRWLEFLTTYQYTLKHRPGSSNSNVDMLSRLPMPPTPQ 306          
BLAST of mRNA_H-paniculata_contig64024.14214.1 vs. uniprot
Match: A0A6H5L1K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1K5_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 3.080e-30
Identity = 60/131 (45.80%), Postives = 86/131 (65.65%), Query Frame = 0
Query:    1 TRPFQLTTDACKHSLGAVLEQLQADNTLRPLVYISRTTDNNEKNWDAMDLECAALVWAIKKLRVFLYGMKLDAFTDLEPLLNYISLSEKKPKVQRMCDILSQFQFNLRYIPGKRNQLADALSRLPIPATEE 131
            TRP +L  DA    LGA L+Q QAD ++RP+V+ISR+T + E+NW  +DLE  A+VWAIK+LR +L G     +TD + L N   + +  P+VQR  + L+ +Q+ L++ PG  N  AD LSRLPIP + +
Sbjct:  532 TRPLRLHCDASLDDLGATLKQEQADGSVRPIVFISRSTLDAERNWTPLDLEAGAIVWAIKRLRRYLRGTHFQIWTDNQALENISKVGDHSPRVQRWLESLTAYQYTLKHRPGSSNSNADMLSRLPIPPSTQ 662          
BLAST of mRNA_H-paniculata_contig64024.14214.1 vs. uniprot
Match: A0A6H5KXJ0_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXJ0_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 1.750e-29
Identity = 56/129 (43.41%), Postives = 80/129 (62.02%), Query Frame = 0
Query:    2 RPFQLTTDACKHSLGAVLEQLQADNTLRPLVYISRTTDNNEKNWDAMDLECAALVWAIKKLRVFLYGMKLDAFTDLEPLLNYISLSEKKPKVQRMCDILSQFQFNLRYIPGKRNQLADALSRLPIPATE 130
            RP +L +D+C    GA LEQ Q D ++RP+VYISR T   E+NW  +DLE   +VWAIK+LR +L+  K   ++D + L +   + E   +VQR  + LS F + L+Y  G  N  AD LSR+P+PA +
Sbjct:   11 RPLRLCSDSCIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFVIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRMPLPAQD 139          
BLAST of mRNA_H-paniculata_contig64024.14214.1 vs. uniprot
Match: A0A6H5L6U8_9PHAE (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U8_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 8.480e-29
Identity = 57/130 (43.85%), Postives = 81/130 (62.31%), Query Frame = 0
Query:    1 TRPFQLTTDACKHSLGAVLEQLQADNTLRPLVYISRTTDNNEKNWDAMDLECAALVWAIKKLRVFLYGMKLDAFTDLEPLLNYISLSEKKPKVQRMCDILSQFQFNLRYIPGKRNQLADALSRLPIPATE 130
            +RP +L +DAC    GA LEQ Q D ++RP+VYISR T   E+NW  +DLE   +VWAIK+LR +L+  K   ++D + L +   + E   +VQR  + LS F + L+Y  G  N  AD LSR+P+PA +
Sbjct:  130 SRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFVIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRMPLPAQD 259          
BLAST of mRNA_H-paniculata_contig64024.14214.1 vs. uniprot
Match: A0A6H5JPT7_9PHAE (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT7_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 9.820e-29
Identity = 58/133 (43.61%), Postives = 82/133 (61.65%), Query Frame = 0
Query:    1 TRPFQLTTDACKHSLGAVLEQLQADNTLRPLVYISRTTDNNEKNWDAMDLECAALVWAIKKLRVFLYGMKLDAFTDLEPLLNYISLSEKKPKVQRMCDILSQFQFNLRYIPGKRNQLADALSRLPIPATEEGE 133
            +RP +L ++AC    GA LEQ Q D ++RP+VYISR T   E+NW  +DLE   +VWAIK+LR +L+  K   ++D + L +   + E   +VQR  + LS F + L+Y  G  N  AD LSRLP+PA +  E
Sbjct:  135 SRPLRLCSNACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRQGSANGNADFLSRLPLPAQDTDE 267          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig64024.14214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L269_9PHAE3.820e-4865.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJH5_9PHAE5.450e-4662.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKY6_9PHAE1.570e-4359.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPU9_9PHAE1.770e-3761.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRW3_9PHAE2.710e-3552.31Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JG96_9PHAE1.270e-3045.04RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L1K5_9PHAE3.080e-3045.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXJ0_9PHAE1.750e-2943.41RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L6U8_9PHAE8.480e-2943.85RT_RNaseH domain-containing protein (Fragment) n=1... [more]
A0A6H5JPT7_9PHAE9.820e-2943.61RT_RNaseH domain-containing protein (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.370coord: 2..110
e-value: 1.4E-32
score: 115.0
NoneNo IPR availableGENE3D3.30.70.270coord: 111..123
e-value: 1.4E-32
score: 115.0
NoneNo IPR availablePANTHERPTHR24559:SF275coord: 8..129
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 8..129
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..109
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 2..103
e-value: 1.0E-25
score: 90.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig64024contigH-paniculata_contig64024:276..680 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig64024.14214.1mRNA_H-paniculata_contig64024.14214.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig64024 276..680 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig64024.14214.1 ID=prot_H-paniculata_contig64024.14214.1|Name=mRNA_H-paniculata_contig64024.14214.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=135bp
TRPFQLTTDACKHSLGAVLEQLQADNTLRPLVYISRTTDNNEKNWDAMDL
ECAALVWAIKKLRVFLYGMKLDAFTDLEPLLNYISLSEKKPKVQRMCDIL
SQFQFNLRYIPGKRNQLADALSRLPIPATEEGENA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041373RT_RNaseH