prot_H-paniculata_contig64022.14212.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig64022.14212.1
Unique Nameprot_H-paniculata_contig64022.14212.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length91
Homology
BLAST of mRNA_H-paniculata_contig64022.14212.1 vs. uniprot
Match: A0A2H4ZR19_9PHAE (Ribosomal protein S10 n=1 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A2H4ZR19_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 2.690e-40
Identity = 65/90 (72.22%), Postives = 80/90 (88.89%), Query Frame = 0
Query:    2 HSIKS-TYICEVWSSSTNLTSLKFWFLLLPLSRPCTGLSTKIKRFTLLRSPLGNNTSKDQFERREYRGYFYLKSQNPSEILAILDVLRHS 90
            H++K+ TY+C+VWSSST+L +LK WFLLLPL + CTGLSTK KRFTLLRSPLGN T+KDQFER+EYR YF+LKS++PS ILA L++LRHS
Sbjct:    3 HTVKTHTYLCKVWSSSTDLKALKNWFLLLPLIKKCTGLSTKTKRFTLLRSPLGNKTAKDQFERKEYRSYFFLKSEDPSRILAFLNILRHS 92          
BLAST of mRNA_H-paniculata_contig64022.14212.1 vs. uniprot
Match: A0A3G5FPL8_9PHAE (Ribosomal protein S10 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPL8_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 3.700e-40
Identity = 66/87 (75.86%), Postives = 75/87 (86.21%), Query Frame = 0
Query:    5 KSTYICEVWSSSTNLTSLKFWFLLLPLSRPCTGLSTKIKRFTLLRSPLGNNTSKDQFERREYRGYFYLKSQNPSEILAILDVLRHSN 91
            + TYICEVWSSST+L SLK W LLLPLSRP T LSTKIKRFTLLRSPLGN  SKDQFERREYR YF  KS+ PS++LA+L+VL++SN
Sbjct:    5 QKTYICEVWSSSTDLKSLKLWLLLLPLSRPSTALSTKIKRFTLLRSPLGNKRSKDQFERREYRSYFSFKSKRPSKVLAVLEVLKYSN 91          
BLAST of mRNA_H-paniculata_contig64022.14212.1 vs. uniprot
Match: A0A0U1V7T2_9PHAE (Ribosomal protein S10 n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1V7T2_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 5.760e-40
Identity = 66/87 (75.86%), Postives = 76/87 (87.36%), Query Frame = 0
Query:    5 KSTYICEVWSSSTNLTSLKFWFLLLPLSRPCTGLSTKIKRFTLLRSPLGNNTSKDQFERREYRGYFYLKSQNPSEILAILDVLRHSN 91
            K  Y CEVWS+ST+L SLK+W LLLPL R  TGLSTKIKRFTLLRSPLGN  SKDQFERREY+ YF+LKS+NPSEILA+LD+LR+S+
Sbjct:    6 KIIYSCEVWSTSTDLISLKYWSLLLPLFRSSTGLSTKIKRFTLLRSPLGNKASKDQFERREYKSYFFLKSENPSEILALLDILRYSS 92          
BLAST of mRNA_H-paniculata_contig64022.14212.1 vs. uniprot
Match: A0A089MX90_PETFA (Ribosomal protein S10 n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089MX90_PETFA)

HSP 1 Score: 133 bits (334), Expect = 1.310e-38
Identity = 61/86 (70.93%), Postives = 77/86 (89.53%), Query Frame = 0
Query:    5 KSTYICEVWSSSTNLTSLKFWFLLLPLSRPCTGLSTKIKRFTLLRSPLGNNTSKDQFERREYRGYFYLKSQNPSEILAILDVLRHS 90
            K+ Y+C+VWS+ST+L SLK+W LLLPL++ CTGLSTKIKRFTLLRSPLGN T+KDQFE++EYR Y   KS+NPS+ILA+LD+LR+S
Sbjct:    7 KTIYLCKVWSASTDLKSLKYWSLLLPLAKQCTGLSTKIKRFTLLRSPLGNKTAKDQFEKKEYRSYLSFKSKNPSKILALLDILRYS 92          
BLAST of mRNA_H-paniculata_contig64022.14212.1 vs. uniprot
Match: A0A8F0FBQ0_AKKLU (Ribosomal protein S10 n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0FBQ0_AKKLU)

HSP 1 Score: 129 bits (323), Expect = 1.040e-36
Identity = 60/85 (70.59%), Postives = 76/85 (89.41%), Query Frame = 0
Query:    7 TYICEVWSSSTNLTSLKFWFLLLPLSRPCTGLSTKIKRFTLLRSPLGNNTSKDQFERREYRGYFYLKSQNPSEILAILDVLRHSN 91
            T+ C+VWS+ST+L+SLK W+LLLPLS P TGLST+IKRFTLLRSPLGN TSKDQFERREYRGYF+++S++  EIL+++  LR+SN
Sbjct:    9 TFNCKVWSTSTDLSSLKLWYLLLPLSAPSTGLSTRIKRFTLLRSPLGNKTSKDQFERREYRGYFHIQSKHACEILSLVHALRYSN 93          
BLAST of mRNA_H-paniculata_contig64022.14212.1 vs. uniprot
Match: A0A6N3IW20_9PHAE (Ribosomal protein S10 n=11 Tax=Lessoniaceae TaxID=35120 RepID=A0A6N3IW20_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 4.730e-35
Identity = 62/85 (72.94%), Postives = 71/85 (83.53%), Query Frame = 0
Query:    7 TYICEVWSSSTNLTSLKFWFLLLPLSRPCTGLSTKIKRFTLLRSPLGNNTSKDQFERREYRGYFYLKSQNPSEILAILDVLRHSN 91
            TYIC+VWS ST+L SL F  LLLPL    TGLST+IKRFTLLRSPLGN T+KDQFERREYR YF LKSQNP++ILA LD+L++ N
Sbjct:    9 TYICKVWSVSTDLKSLNFLLLLLPLFISSTGLSTRIKRFTLLRSPLGNKTAKDQFERREYRSYFTLKSQNPAKILAFLDILKYLN 93          
BLAST of mRNA_H-paniculata_contig64022.14212.1 vs. uniprot
Match: A0A8F0FCZ9_9PHAE (Ribosomal protein S10 n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0FCZ9_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 9.530e-35
Identity = 59/87 (67.82%), Postives = 69/87 (79.31%), Query Frame = 0
Query:    5 KSTYICEVWSSSTNLTSLKFWFLLLPLSRPCTGLSTKIKRFTLLRSPLGNNTSKDQFERREYRGYFYLKSQNPSEILAILDVLRHSN 91
            K  Y C VWS+S NL SLK W+LLLPLS P TGL T+IKRFTLLRSPLGN T+KDQFERREYRGYF ++S++  +ILA +D L H N
Sbjct:    9 KVLYHCRVWSASINLNSLKLWYLLLPLSEPSTGLPTRIKRFTLLRSPLGNKTAKDQFERREYRGYFSIQSEHACKILAFIDTLGHFN 95          
BLAST of mRNA_H-paniculata_contig64022.14212.1 vs. uniprot
Match: A0A0U1V7C6_SCYLO (Ribosomal protein S10 n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A0U1V7C6_SCYLO)

HSP 1 Score: 122 bits (305), Expect = 3.340e-34
Identity = 58/87 (66.67%), Postives = 71/87 (81.61%), Query Frame = 0
Query:    5 KSTYICEVWSSSTNLTSLKFWFLLLPLSRPCTGLSTKIKRFTLLRSPLGNNTSKDQFERREYRGYFYLKSQNPSEILAILDVLRHSN 91
            K+ Y CE WS+S +L +LK+W LLLPL+  CTGLSTK KRFTLLRSPLGN  +KDQFERREYR +F  KS++PSE+LA L VLR+S+
Sbjct:    6 KTLYSCEFWSASIDLKNLKYWSLLLPLTESCTGLSTKTKRFTLLRSPLGNKAAKDQFERREYRRHFIFKSKSPSELLAFLSVLRYSS 92          
BLAST of mRNA_H-paniculata_contig64022.14212.1 vs. uniprot
Match: A0A6N3ISS5_9PHAE (Ribosomal protein S10 n=7 Tax=Ecklonia TaxID=105406 RepID=A0A6N3ISS5_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 1.570e-33
Identity = 59/84 (70.24%), Postives = 70/84 (83.33%), Query Frame = 0
Query:    8 YICEVWSSSTNLTSLKFWFLLLPLSRPCTGLSTKIKRFTLLRSPLGNNTSKDQFERREYRGYFYLKSQNPSEILAILDVLRHSN 91
            YIC+VWS+ST+L SL F  LLLPL    TGLST+IKRFTLLRSPLGN T+KDQFERREYR YF  KSQNP++ILA L++L++ N
Sbjct:   10 YICKVWSASTDLKSLNFLLLLLPLFISSTGLSTRIKRFTLLRSPLGNKTAKDQFERREYRSYFTFKSQNPAKILAFLEILKYLN 93          
BLAST of mRNA_H-paniculata_contig64022.14212.1 vs. uniprot
Match: Q2TUD7_9PHAE (Ribosomal protein S10 n=2 Tax=Desmarestia TaxID=31339 RepID=Q2TUD7_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 6.210e-33
Identity = 60/85 (70.59%), Postives = 67/85 (78.82%), Query Frame = 0
Query:    7 TYICEVWSSSTNLTSLKFWFLLLPLSRPCTGLSTKIKRFTLLRSPLGNNTSKDQFERREYRGYFYLKSQNPSEILAILDVLRHSN 91
            TY CEVWS STNL +LK W LLLPLS   TGLST+IKRFTLLRSPLGN TSKDQFER+EYR Y  ++S+  S+ILA LDVL   N
Sbjct:    8 TYKCEVWSLSTNLVNLKLWVLLLPLSLSSTGLSTRIKRFTLLRSPLGNKTSKDQFERQEYRSYLSIESKKASKILAFLDVLSQLN 92          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig64022.14212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2H4ZR19_9PHAE2.690e-4072.22Ribosomal protein S10 n=1 Tax=Endarachne binghamia... [more]
A0A3G5FPL8_9PHAE3.700e-4075.86Ribosomal protein S10 n=1 Tax=Cladosiphon okamuran... [more]
A0A0U1V7T2_9PHAE5.760e-4075.86Ribosomal protein S10 n=1 Tax=Colpomenia peregrina... [more]
A0A089MX90_PETFA1.310e-3870.93Ribosomal protein S10 n=1 Tax=Petalonia fascia Tax... [more]
A0A8F0FBQ0_AKKLU1.040e-3670.59Ribosomal protein S10 n=1 Tax=Akkesiphycus lubricu... [more]
A0A6N3IW20_9PHAE4.730e-3572.94Ribosomal protein S10 n=11 Tax=Lessoniaceae TaxID=... [more]
A0A8F0FCZ9_9PHAE9.530e-3567.82Ribosomal protein S10 n=1 Tax=Pseudochorda nagaii ... [more]
A0A0U1V7C6_SCYLO3.340e-3466.67Ribosomal protein S10 n=1 Tax=Scytosiphon lomentar... [more]
A0A6N3ISS5_9PHAE1.570e-3370.24Ribosomal protein S10 n=7 Tax=Ecklonia TaxID=10540... [more]
Q2TUD7_9PHAE6.210e-3370.59Ribosomal protein S10 n=2 Tax=Desmarestia TaxID=31... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027486Ribosomal protein S10 domainPFAMPF00338Ribosomal_S10coord: 37..88
e-value: 2.3E-7
score: 31.0
IPR036838Ribosomal protein S10 domain superfamilyGENE3D3.30.70.600coord: 8..90
e-value: 7.0E-10
score: 40.7
IPR036838Ribosomal protein S10 domain superfamilySUPERFAMILY54999Ribosomal protein S10coord: 10..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig64022contigH-paniculata_contig64022:3..275 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig64022.14212.1mRNA_H-paniculata_contig64022.14212.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig64022 3..275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig64022.14212.1 ID=prot_H-paniculata_contig64022.14212.1|Name=mRNA_H-paniculata_contig64022.14212.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=91bp
MHSIKSTYICEVWSSSTNLTSLKFWFLLLPLSRPCTGLSTKIKRFTLLRS
PLGNNTSKDQFERREYRGYFYLKSQNPSEILAILDVLRHSN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027486Ribosomal_S10_dom
IPR036838Ribosomal_S10_dom_sf