prot_H-paniculata_contig6378.14180.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6378.14180.1
Unique Nameprot_H-paniculata_contig6378.14180.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length118
Homology
BLAST of mRNA_H-paniculata_contig6378.14180.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 75.9 bits (185), Expect = 1.180e-13
Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 0
Query:    6 SVARYKARLVAQGFAKVDDEDFFEISDLVARMSTLRTVFRLATEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFP 81
            ++A+YKARLVAQGF+++   D+ +    VA++S++R +  LA   D+EL  MDV  AYLN  +EEE+F+K PP FP
Sbjct:   89 AIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFP 164          
BLAST of mRNA_H-paniculata_contig6378.14180.1 vs. uniprot
Match: A5BB95_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BB95_VITVI)

HSP 1 Score: 75.1 bits (183), Expect = 2.230e-13
Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 0
Query:    2 KEDDSVARYKARLVAQGFAKVDDEDFFEISDLVARMSTLRTVFRLATEHDFELEGMDVDAAYLNAPVEEELFVKLPPEF 80
            K DD+V RYKARLVA+GF++  D D+ E   L+A+++T+R +  LA   D+ L   D+  A+LN  +EEE+F+ LPP F
Sbjct:  313 KVDDTVERYKARLVAKGFSQTYDIDYIETFALMAKLNTIRVLLSLAANLDWPLHQFDIKNAFLNGELEEEVFMMLPPRF 391          
BLAST of mRNA_H-paniculata_contig6378.14180.1 vs. uniprot
Match: A0A6L2NKU3_TANCI (Zinc finger, CCHC-type (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2NKU3_TANCI)

HSP 1 Score: 73.2 bits (178), Expect = 1.050e-12
Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    1 MKEDDSVARYKARLVAQGFAKVDDEDFFEISDLVARMSTLRTVFRLATEHDFELEGMDVDAAYLNAPVEEELFVKLPPEF 80
            MK D S+ +YKARLV QGF + +  DFF+    VAR+ST+R +  LA  HD  +  MDV  A+LNA ++EE+++K P  F
Sbjct:  292 MKVDGSIDKYKARLVIQGFRQKNGIDFFDTYAPVARISTIRLLLALAAIHDLVIHQMDVKTAFLNADLDEEIYMKQPEGF 371          
BLAST of mRNA_H-paniculata_contig6378.14180.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 72.8 bits (177), Expect = 1.540e-12
Identity = 34/72 (47.22%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    7 VARYKARLVAQGFAKVDDEDFFEISDLVARMSTLRTVFRLATEHDFELEGMDVDAAYLNAPVEEELFVKLPP 78
            +  YKARLVAQGF+++   DF +    VA+++++R +  LA  HD+++  MDV  AYLNA +EEE+F+K PP
Sbjct: 1020 IESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPP 1091          
BLAST of mRNA_H-paniculata_contig6378.14180.1 vs. uniprot
Match: A0A401GTF6_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GTF6_9APHY)

HSP 1 Score: 72.0 bits (175), Expect = 2.860e-12
Identity = 34/72 (47.22%), Postives = 50/72 (69.44%), Query Frame = 0
Query:    7 VARYKARLVAQGFAKVDDEDFFEISDLVARMSTLRTVFRLATEHDFELEGMDVDAAYLNAPVEEELFVKLPP 78
            +  YKARLVAQGF +V   DF +    VA+++++R +  LA  HD+++  MDV  AYLNA +EE++F+K PP
Sbjct:  989 IESYKARLVAQGFTQVPGVDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNAELEEDIFMKQPP 1060          
BLAST of mRNA_H-paniculata_contig6378.14180.1 vs. uniprot
Match: A0A438JKG5_VITVI (Retrovirus-related Pol polyprotein from transposon RE2 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JKG5_VITVI)

HSP 1 Score: 70.5 bits (171), Expect = 3.460e-12
Identity = 35/79 (44.30%), Postives = 52/79 (65.82%), Query Frame = 0
Query:    2 KEDDSVARYKARLVAQGFAKVDDEDFFEISDLVARMSTLRTVFRLATEHDFELEGMDVDAAYLNAPVEEELFVKLPPEF 80
            K DD++ RYKARLVA+GF +  D D+ +    VA+++T+R +  LAT  D+     D+  A+LN  +EEE+F+ LPP F
Sbjct:   41 KADDTIERYKARLVAKGFTQTYDIDYTKTFAPVAKLNTIRVLLSLATNLDWPFHQFDIKNAFLNGELEEEVFMTLPPGF 119          
BLAST of mRNA_H-paniculata_contig6378.14180.1 vs. uniprot
Match: A0A151QNH5_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QNH5_CAJCA)

HSP 1 Score: 71.6 bits (174), Expect = 3.890e-12
Identity = 40/95 (42.11%), Postives = 65/95 (68.42%), Query Frame = 0
Query:    2 KEDDSVARYKARLVAQGFAKVDDEDFFEISDLVARMSTLRTVFRLATEHDFELEGMDVDAAYLNAPVEEELFVKLPPEFPPFSRDIPFVRRLRKA 96
            K D S+A++KARLVA+GF + +  D+ E+   VAR+ T+R +  LA+  +++L  +DV +A+LN P++EE+FV  PP F    +++  V RL+KA
Sbjct:  881 KSDGSIAKHKARLVAKGFMQKEGIDYSEVFAPVARLETVRLIVALASWRNWKLWQLDVKSAFLNGPLDEEVFVTQPPGFICKGKELK-VLRLKKA 974          
BLAST of mRNA_H-paniculata_contig6378.14180.1 vs. uniprot
Match: A0A151TIQ1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TIQ1_CAJCA)

HSP 1 Score: 71.2 bits (173), Expect = 5.160e-12
Identity = 36/74 (48.65%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    7 VARYKARLVAQGFAKVDDEDFFEISDLVARMSTLRTVFRLATEHDFELEGMDVDAAYLNAPVEEELFVKLPPEF 80
            VA+YKARLVA+GF +    D+ E+   VAR+ T+R V  +A+ H + +  MDV +A+LN P+EEE+FV  PP F
Sbjct:  404 VAKYKARLVAKGFLQRQGLDYDEVFAPVARLETIRLVVSMASYHCWPIHQMDVKSAFLNGPLEEEVFVSQPPGF 477          
BLAST of mRNA_H-paniculata_contig6378.14180.1 vs. uniprot
Match: UPI001C91A683 (hypothetical protein n=1 Tax=Modestobacter lapidis TaxID=1608613 RepID=UPI001C91A683)

HSP 1 Score: 70.9 bits (172), Expect = 5.260e-12
Identity = 32/74 (43.24%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    7 VARYKARLVAQGFAKVDDEDFFEISDLVARMSTLRTVFRLATEHDFELEGMDVDAAYLNAPVEEELFVKLPPEF 80
            + +YKARLVA+G+A+++  D+ EI   VA+++++RTV   A  +D E+E MDV  A+L+  +EEE+++K P  F
Sbjct:   21 IGKYKARLVAKGYAQIEGVDYAEIFSPVAKLTSIRTVLSAAAAYDLEIEQMDVKTAFLHGDLEEEIYMKQPEGF 94          
BLAST of mRNA_H-paniculata_contig6378.14180.1 vs. uniprot
Match: A0A151QP43_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QP43_CAJCA)

HSP 1 Score: 71.2 bits (173), Expect = 5.280e-12
Identity = 36/74 (48.65%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    7 VARYKARLVAQGFAKVDDEDFFEISDLVARMSTLRTVFRLATEHDFELEGMDVDAAYLNAPVEEELFVKLPPEF 80
            VA+YKARLVA+GF +    D+ E+   VAR+ T+R V  +A+ H + +  MDV +A+LN P+EEE+FV  PP F
Sbjct:  787 VAKYKARLVAKGFLQRQGLDYDEVFAPVARLETIRLVVSMASYHCWPIHQMDVKSAFLNGPLEEEVFVSQPPGF 860          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6378.14180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y9ZVS1_9AGAM1.180e-1348.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
A5BB95_VITVI2.230e-1346.84Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]
A0A6L2NKU3_TANCI1.050e-1247.50Zinc finger, CCHC-type (Fragment) n=1 Tax=Tanacetu... [more]
A0A401GQU1_9APHY1.540e-1247.22Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A401GTF6_9APHY2.860e-1247.22Integrase catalytic domain-containing protein n=1 ... [more]
A0A438JKG5_VITVI3.460e-1244.30Retrovirus-related Pol polyprotein from transposon... [more]
A0A151QNH5_CAJCA3.890e-1242.11Retrovirus-related Pol polyprotein from transposon... [more]
A0A151TIQ1_CAJCA5.160e-1248.65Retrovirus-related Pol polyprotein from transposon... [more]
UPI001C91A6835.260e-1243.24hypothetical protein n=1 Tax=Modestobacter lapidis... [more]
A0A151QP43_CAJCA5.280e-1248.65Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..81
e-value: 8.0E-19
score: 68.2
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 4..80
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6378contigH-paniculata_contig6378:8712..9065 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6378.14180.1mRNA_H-paniculata_contig6378.14180.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6378 7903..10281 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6378.14180.1 ID=prot_H-paniculata_contig6378.14180.1|Name=mRNA_H-paniculata_contig6378.14180.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=118bp
MKEDDSVARYKARLVAQGFAKVDDEDFFEISDLVARMSTLRTVFRLATEH
DFELEGMDVDAAYLNAPVEEELFVKLPPEFPPFSRDIPFVRRLRKACTVS
IRAAETGITLLTIFLLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like