prot_H-paniculata_contig632.14109.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig632.14109.1
Unique Nameprot_H-paniculata_contig632.14109.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length158
Homology
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BLAST of mRNA_H-paniculata_contig632.14109.1 vs. uniprot
Match: D8LBB5_ECTSI (Essential abundant protein involved in regulation of transcription n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB5_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 9.950e-43
Identity = 98/157 (62.42%), Postives = 111/157 (70.70%), Query Frame = 0 
Query:    2 DGKEYGSLVAERLVKLVRSESLESRDTLHRQLVVGAAPYLSHTAWYARVAAASCLESLARLECVGPEMTVCNPSSSQPLLESTKSESLVTTEGKLARGWVSLGDLRLKQVLQRGVLLLSRGSQQDEAVLSEQRASSLDVDTRVGQQRKRLLKCLGLA 158
            +G++YG LVAERLV+LVRSE LE RD LHRQLV GAA YL HTAWYARV+AA+CLESLARLE  G E     PS +            +T E  LARGWV LGD+RL +VL+RG LLLS G   D  V SE+   S DV TRVG+QRKRLLKCLGLA
Sbjct:   19 EGRQYGDLVAERLVELVRSEPLEGRDDLHRQLVAGAATYLCHTAWYARVSAAACLESLARLE-YGQE----EPSRAAVKXXXXXXXDALTDE--LARGWVGLGDVRLAEVLERGALLLSHGEDAD-VVDSERATPSADVGTRVGRQRKRLLKCLGLA 167
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BLAST of mRNA_H-paniculata_contig632.14109.1 vs. uniprot
Match: A0A6H5JCH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH4_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 2.930e-19
Identity = 55/91 (60.44%), Postives = 61/91 (67.03%), Query Frame = 0 
Query:   32 QLVVGAAPYLSHTAWYARVAAASCLESLARLECVGPEMTVCNPSSSQPLLESTKSESLVTTEGKLARGWVSLGDLRLKQVLQRGVLLLSRG 122
            QLV GAA YL HTAWYARV+AASCLESLARLE  G E     PS +    E       +T E  LARGWV LGD+RL +VL+RG LLLS G
Sbjct:    8 QLVAGAATYLCHTAWYARVSAASCLESLARLE-YGQE----EPSRAAKAKEGGGGGDALTDE--LARGWVGLGDVRLAEVLERGALLLSHG 91
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig632.14109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBB5_ECTSI9.950e-4362.42Essential abundant protein involved in regulation ... [more]
A0A6H5JCH4_9PHAE2.930e-1960.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig632contigH-paniculata_contig632:4889..7142 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig632.14109.1mRNA_H-paniculata_contig632.14109.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig632 4889..7142 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig632.14109.1 ID=prot_H-paniculata_contig632.14109.1|Name=mRNA_H-paniculata_contig632.14109.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp
LDGKEYGSLVAERLVKLVRSESLESRDTLHRQLVVGAAPYLSHTAWYARV
AAASCLESLARLECVGPEMTVCNPSSSQPLLESTKSESLVTTEGKLARGW
VSLGDLRLKQVLQRGVLLLSRGSQQDEAVLSEQRASSLDVDTRVGQQRKR
LLKCLGLA
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