prot_H-paniculata_contig63158.14102.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig63158.14102.1
Unique Nameprot_H-paniculata_contig63158.14102.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length97
Homology
[Close]
BLAST of mRNA_H-paniculata_contig63158.14102.1 vs. uniprot
Match: A0A151ITN2_9HYME (Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151ITN2_9HYME)

HSP 1 Score: 55.5 bits (132), Expect = 8.220e-7
Identity = 27/79 (34.18%), Postives = 47/79 (59.49%), Query Frame = 0 
Query:    2 EIWICDNGATKHMTHNSDFLFSYQEC-DGHVRLADGNRLPIEGIGMLFHQFRFDSEVVLMKFTQVAFIPLLSHHLLSLG 79
            ++WI D+GA++HMTH S+++ + Q   D HV L DG +  + G G ++ Q   D + +      V ++P L+ +L S+G
Sbjct:  286 DVWILDSGASRHMTHRSNWISNLQTYKDEHVSLGDGTKCKVHGRGTVYIQRLVDGQWLDGVLEDVLYVPDLNKNLFSVG 364
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig63158.14102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A151ITN2_9HYME8.220e-734.18Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig63158contigH-paniculata_contig63158:456..746 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig63158.14102.1mRNA_H-paniculata_contig63158.14102.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig63158 456..746 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig63158.14102.1 ID=prot_H-paniculata_contig63158.14102.1|Name=mRNA_H-paniculata_contig63158.14102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp
MEIWICDNGATKHMTHNSDFLFSYQECDGHVRLADGNRLPIEGIGMLFHQ
FRFDSEVVLMKFTQVAFIPLLSHHLLSLGKLADFGHEYRCSREGLRI
back to top