prot_H-paniculata_contig63078.14090.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig63078.14090.1
Unique Nameprot_H-paniculata_contig63078.14090.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length120
Homology
BLAST of mRNA_H-paniculata_contig63078.14090.1 vs. uniprot
Match: A0A6G0WRV3_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRV3_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.020e-12
Identity = 33/92 (35.87%), Postives = 56/92 (60.87%), Query Frame = 0
Query:    8 DLPVEPKNYREAQTSSEWEHWQRAEEVEMQGLIDNGVWTQVERLKNKLVVSTMMIYKRIIGEDGKVEKWKRHLVAHGNRQIKGIHFQEASSP 99
            ++P+ P+NY EA TS EWEHW+ A E+E+  +  NG W  V+  +++  + T  +++     DG +E++K  LV  G  Q+KG+ + E  +P
Sbjct:  634 NIPI-PRNYEEAMTSKEWEHWKAAIEMELASIKSNGTWKYVKPPQDRKTLKTTWVFRVKEKCDGSIERFKARLVVKGFLQVKGLDYDEVFAP 724          
BLAST of mRNA_H-paniculata_contig63078.14090.1 vs. uniprot
Match: A0A6G0WQH0_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WQH0_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.070e-12
Identity = 33/92 (35.87%), Postives = 56/92 (60.87%), Query Frame = 0
Query:    8 DLPVEPKNYREAQTSSEWEHWQRAEEVEMQGLIDNGVWTQVERLKNKLVVSTMMIYKRIIGEDGKVEKWKRHLVAHGNRQIKGIHFQEASSP 99
            ++P+ P+NY EA TS EWEHW+ A E+E+  +  NG W  V+  +++  + T  +++     DG +E++K  LV  G  Q+KG+ + E  +P
Sbjct:  941 NIPI-PRNYEEAMTSKEWEHWKAAIEMELASIKSNGTWKYVKPPQDRKTLKTTWVFRVKEKCDGSIERFKARLVVKGFLQVKGLDYDEVFAP 1031          
BLAST of mRNA_H-paniculata_contig63078.14090.1 vs. uniprot
Match: A0A6G0W2J0_9STRA (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W2J0_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.010e-11
Identity = 33/91 (36.26%), Postives = 55/91 (60.44%), Query Frame = 0
Query:    9 LPVEPKNYREAQTSSEWEHWQRAEEVEMQGLIDNGVWTQVERLKNKLVVSTMMIYKRIIGEDGKVEKWKRHLVAHGNRQIKGIHFQEASSP 99
            +P+ P+NY EA TS EWEHW+ A E+E+  +  NG W  V+  +++  + T  +++     DG +E++K  LV  G  Q+KG+ + E  +P
Sbjct:  559 IPI-PRNYEEAMTSKEWEHWKAAIEMELAPIKPNGTWKYVKPPQDRKTLKTTWVFRVKEKCDGSIERFKARLVVKGFLQVKGLDYDEVFAP 648          
BLAST of mRNA_H-paniculata_contig63078.14090.1 vs. uniprot
Match: UPI00092E9081 (uncharacterized protein LOC109363584 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092E9081)

HSP 1 Score: 66.6 bits (161), Expect = 1.130e-11
Identity = 36/76 (47.37%), Postives = 46/76 (60.53%), Query Frame = 0
Query:   12 EPKNYREAQTSSEWEHWQRAEEVEMQGLIDNGVWTQVERLKNKLVVSTMMIYKRIIGEDGKVEKWKRHLVAHGNRQ 87
            +PK Y EA    + E WQ A + EM+ +  N VWT VE  K+   +  M +YK+ IGEDGKVE +K HLV  G RQ
Sbjct:   49 DPKCYEEAMQILDHEKWQEAIKSEMESMKTNKVWTLVEASKDIKPIGCMWVYKKKIGEDGKVETYKAHLVDKGYRQ 124          
BLAST of mRNA_H-paniculata_contig63078.14090.1 vs. uniprot
Match: A0A5N6MMS5_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MMS5_9ASTR)

HSP 1 Score: 69.3 bits (168), Expect = 2.650e-11
Identity = 37/113 (32.74%), Postives = 59/113 (52.21%), Query Frame = 0
Query:    8 DLPVEPKNYREAQTSSEWEHWQRAEEVEMQGLIDNGVWTQVERLKNKLVVSTMMIYKRIIGEDGKVEKWKRHLVAHGNRQIKGIHFQEASSPAPAAATTKMALSLAVIQDWEL 120
            D PVEP+N+ +A T SEW   + A   EM  L+ N  W  V + +    +S   +YK     DG ++++K  LVA G  Q  G+ ++E  SP     T ++ +++A+   W L
Sbjct:  545 DEPVEPENFAQANTMSEW---RSAMNDEMSALMKNETWDLVPKPEGVNCISCKWVYKLKFKSDGSIDRYKARLVARGFNQQLGLDYEETFSPVAKLTTVRVLIAVAISNGWSL 654          
BLAST of mRNA_H-paniculata_contig63078.14090.1 vs. uniprot
Match: A0A2N5SCW9_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5SCW9_9BASI)

HSP 1 Score: 63.2 bits (152), Expect = 3.870e-9
Identity = 33/105 (31.43%), Postives = 57/105 (54.29%), Query Frame = 0
Query:   10 PVEPKNYREAQTSSEWEHWQRAEEVEMQGLIDNGVWTQVERLKNKLVVSTMMIYKRIIGEDGKVEKWKRHLVAHGNRQIKGIHFQEASSPAPAAATTKMALSLAV 114
            P  PK YR A +S E   W  A ++E+  ++  GVWT V    N  ++ T+ ++++    +G + K+K  L A G+ Q +GI F E  +P   ++  K AL++ +
Sbjct:  853 PSVPKTYRSAMSSPEAAEWSSAIKLELDAMVQLGVWTVVPIPSNHHLLGTIWVFRKKYDANGNLMKFKARLCAQGSAQQEGIDFNETYAPTGRSSALKTALTVGI 957          
BLAST of mRNA_H-paniculata_contig63078.14090.1 vs. uniprot
Match: A0A6L2L857_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2L857_TANCI)

HSP 1 Score: 62.4 bits (150), Expect = 6.970e-9
Identity = 35/109 (32.11%), Postives = 53/109 (48.62%), Query Frame = 0
Query:   12 EPKNYREAQTSSEWEHWQRAEEVEMQGLIDNGVWTQVERLKNKLVVSTMMIYKRIIGEDGKVEKWKRHLVAHGNRQIKGIHFQEASSPAPAAATTKMALSLAVIQDWEL 120
            +PK + EA     W     AE   ++ L +N  W   +   NK  +    IYK  +  DG VE+ K  LV  GNRQ+KG+ + E  +P     T    L++A +Q W++
Sbjct:  420 DPKGFEEAVKDPGWCDVMNAE---LRALEENETWELADLPPNKKAIGNHWIYKTKLKSDGSVERKKSKLVVQGNRQMKGVDYDETFAPVAKMMTVMSLLAVAAMQGWDI 525          
BLAST of mRNA_H-paniculata_contig63078.14090.1 vs. uniprot
Match: A0A392RWV3_9FABA (Copia LTR rider (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392RWV3_9FABA)

HSP 1 Score: 58.9 bits (141), Expect = 9.350e-9
Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 0
Query:    2 PEELRGDLPVEPKNYREAQTSSEWEHWQRAEEVEMQGLIDNGVWTQVERLKNKLVVSTMMIYKRIIGEDG-KVEKWKRHLVAHGNRQIKGIHFQEASSP 99
            PEE++     EPKN+REA  + + + W +A   EM  L  N  W  V   +NK VV +M ++K+I G  G +  ++K  LVA+G  Q++ I + E  SP
Sbjct:   19 PEEVQDS---EPKNFREALENIDGKEWLKAMNKEMLSLEKNQTWELVPLPRNKRVVGSMWVFKKIEGIPGVEAPRYKARLVANGFTQVEEIDYNEIFSP 114          
BLAST of mRNA_H-paniculata_contig63078.14090.1 vs. uniprot
Match: A0A8J5YQU7_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YQU7_9ROSI)

HSP 1 Score: 62.0 bits (149), Expect = 9.580e-9
Identity = 33/89 (37.08%), Postives = 49/89 (55.06%), Query Frame = 0
Query:   12 EPKNYREAQTSSEWEHWQRAEEVEMQGLIDNGVWTQVERLKNKLVVSTMMIYKRIIGEDGKVEKWKRHLVAHGNRQIKGIHFQEASSPA 100
            EP+ Y+E  TS + E W  A   EM  + +N VWT V+  +    +    ++K+    DG V+ +K  LVA G RQI G+ + +A SPA
Sbjct:  546 EPRTYQEVVTSPDSEKWLEAMRSEMDSMYENQVWTLVDPPEGVKPIGCKWVFKKKTDMDGNVQTYKGRLVAKGFRQIHGVDYDKAFSPA 634          
BLAST of mRNA_H-paniculata_contig63078.14090.1 vs. uniprot
Match: UPI000900F32D (uncharacterized protein LOC109147109 n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900F32D)

HSP 1 Score: 60.1 bits (144), Expect = 1.100e-8
Identity = 30/88 (34.09%), Postives = 45/88 (51.14%), Query Frame = 0
Query:   27 HWQRAEEVEMQGLIDNGVWTQVERLKNKLVVSTMMIYKRIIGEDGKVEKWKRHLVAHGNRQIKGIHFQEASSPAPAAATTKMALSLAV 114
            HW+ A   E+Q L D+G W   + L     +    +YK     DG +E++K  LV  G+RQIKG+ + E  +P     T    L++AV
Sbjct:   92 HWREAMRQELQSLEDDGTWILEDLLPGHKAIDNKWVYKVKYNADGSIERYKARLVVQGDRQIKGVDYNETFAPTIKMVTVCAFLAVAV 179          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig63078.14090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6G0WRV3_9STRA3.020e-1235.87Integrase catalytic domain-containing protein n=1 ... [more]
A0A6G0WQH0_9STRA3.070e-1235.87Integrase catalytic domain-containing protein n=1 ... [more]
A0A6G0W2J0_9STRA1.010e-1136.26Integrase catalytic domain-containing protein (Fra... [more]
UPI00092E90811.130e-1147.37uncharacterized protein LOC109363584 n=1 Tax=Lupin... [more]
A0A5N6MMS5_9ASTR2.650e-1132.74Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N5SCW9_9BASI3.870e-931.43Integrase catalytic domain-containing protein n=2 ... [more]
A0A6L2L857_TANCI6.970e-932.11Retrovirus-related Pol polyprotein from transposon... [more]
A0A392RWV3_9FABA9.350e-937.37Copia LTR rider (Fragment) n=1 Tax=Trifolium mediu... [more]
A0A8J5YQU7_9ROSI9.580e-937.08Integrase catalytic domain-containing protein n=1 ... [more]
UPI000900F32D1.100e-834.09uncharacterized protein LOC109147109 n=1 Tax=Ipomo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 44..118
e-value: 3.4E-7
score: 30.2
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 9..120
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig63078contigH-paniculata_contig63078:512..871 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig63078.14090.1mRNA_H-paniculata_contig63078.14090.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig63078 512..871 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig63078.14090.1 ID=prot_H-paniculata_contig63078.14090.1|Name=mRNA_H-paniculata_contig63078.14090.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=120bp
MPEELRGDLPVEPKNYREAQTSSEWEHWQRAEEVEMQGLIDNGVWTQVER
LKNKLVVSTMMIYKRIIGEDGKVEKWKRHLVAHGNRQIKGIHFQEASSPA
PAAATTKMALSLAVIQDWEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like