prot_H-paniculata_contig6288.14052.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6288.14052.1
Unique Nameprot_H-paniculata_contig6288.14052.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length168
Homology
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BLAST of mRNA_H-paniculata_contig6288.14052.1 vs. uniprot
Match: D8LSJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ7_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 3.880e-57
Identity = 99/161 (61.49%), Postives = 116/161 (72.05%), Query Frame = 0 
Query:    1 MGYYFAHHTSMKELAPEDYRMNGPRLLSKSPT-APQNGKTADVPKVPASSPTPTPRRRAQMITSYAWEDYGEEVRLTFRQSGWDWSKVYEEEVGAEWGPRRFRLSIDSREYGLHTIDLPRLSGEVGDVKVLKLRSRLVVALVKGGR-GSYSRKTPWTELQS 159
            +GYYFAHH +MKELAPEDY+MNGP+LLSK  T +  NG   +                 Q I+SY+WEDYGEEVRLTFRQS W+W+KV  EE+  EWG RRFR+SIDSREYGLHTIDL RLSG V  V   KL++RLVVALVKGGR GSYS    W++LQ+
Sbjct:  103 LGYYFAHHITMKELAPEDYQMNGPKLLSKGDTTSAPNGARPNGSXXXXXXXXXXXXXXPQQISSYSWEDYGEEVRLTFRQSEWEWAKVDVEEIEIEWGSRRFRMSIDSREYGLHTIDLQRLSGVVAGVTARKLKTRLVVALVKGGRRGSYSHSPAWSKLQA 263
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BLAST of mRNA_H-paniculata_contig6288.14052.1 vs. uniprot
Match: A0A835Z330_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z330_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 8.460e-19
Identity = 59/166 (35.54%), Postives = 81/166 (48.80%), Query Frame = 0 
Query:    1 MGYYFAHHTSMKE--LAPEDYRMNGPRLLSKSPTAPQNGKTADVPKVPASSPTPTPRRRAQMITSYAWEDYGEEVRLTFRQSGWDWSKVYEEEVGAEWGPRRFRLSIDSREYGLHTIDLPRLSGEVGDVKVLKLRSRLVVALVKGGRGSYSRKTPWTELQSKSAPP 164
            +GYY AHH+ + +  +A  ++ MN P+ L                 V A  PT         ITSY +ED   EVRL FRQ GWDWS+V  +E+ A+W  R  RL+I+S +YG H      L GE+  V V K++  +   L+K   G+      W  LQ    PP
Sbjct:  109 LGYYQAHHSKLPDDGIASHEFEMNRPKPLGTR-------------IVTARPPT--------KITSYTYEDTFHEVRLDFRQEGWDWSQVPAQELSADWNGRSARLTINSTKYGAHVAAFTDLYGELAGVAVRKMKRSVRFVLMKKAPGA------WPALQGSPLPP 247
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BLAST of mRNA_H-paniculata_contig6288.14052.1 vs. uniprot
Match: A0A6H5L1W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1W9_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 2.950e-7
Identity = 24/29 (82.76%), Postives = 28/29 (96.55%), Query Frame = 0 
Query:    1 MGYYFAHHTSMKELAPEDYRMNGPRLLSK 29
            +GYYFAHH +MKELAPEDY+MNGP+LLSK
Sbjct:  103 LGYYFAHHITMKELAPEDYQMNGPKLLSK 131
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6288.14052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LSJ7_ECTSI3.880e-5761.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z330_9STRA8.460e-1935.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L1W9_9PHAE2.950e-782.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 58..163
e-value: 3.0E-5
score: 26.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6288contigH-paniculata_contig6288:4219..7717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6288.14052.1mRNA_H-paniculata_contig6288.14052.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6288 3169..7851 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6288.14052.1 ID=prot_H-paniculata_contig6288.14052.1|Name=mRNA_H-paniculata_contig6288.14052.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp
MGYYFAHHTSMKELAPEDYRMNGPRLLSKSPTAPQNGKTADVPKVPASSP
TPTPRRRAQMITSYAWEDYGEEVRLTFRQSGWDWSKVYEEEVGAEWGPRR
FRLSIDSREYGLHTIDLPRLSGEVGDVKVLKLRSRLVVALVKGGRGSYSR
KTPWTELQSKSAPPNGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone