prot_H-paniculata_contig62815.14047.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig62815.14047.1
Unique Nameprot_H-paniculata_contig62815.14047.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length63
Homology
[Close]
BLAST of mRNA_H-paniculata_contig62815.14047.1 vs. uniprot
Match: A0A6H5L650_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 2.240e-7
Identity = 29/67 (43.28%), Postives = 38/67 (56.72%), Query Frame = 0 
Query:    1 FLDVGWLAKVLEPVLNHKGVEQRGASHMFGDA-----ELTEPWHSHSLRRLTDDGILEQRLAQFLWP 62
            FLDV WLA++L+P+LNHK  E        GD       L +P    S  RL ++G+LE RLA  +WP
Sbjct:  507 FLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDPSDIASWDRLKNEGVLEPRLADAIWP 573
[Close]
BLAST of mRNA_H-paniculata_contig62815.14047.1 vs. uniprot
Match: A0A6H5KM56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM56_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 5.070e-6
Identity = 31/70 (44.29%), Postives = 41/70 (58.57%), Query Frame = 0 
Query:    1 FLDVGWLAKVLEPVLNHK------GVEQRGASHMFGDAELTEPWHSH--SLRRLTDDGILEQRLAQFLWP 62
            FLD  WLA++L+P LNHK      G+ + G +   GD  +T    S   SL RL D+G+LE RLA  +WP
Sbjct:  295 FLDFVWLARILKPFLNHKDQVTYDGLVRLGDT---GDVRITLHDQSDIASLDRLKDEGVLEPRLANAIWP 361
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig62815.14047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L650_9PHAE2.240e-743.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KM56_9PHAE5.070e-644.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig62815contigH-paniculata_contig62815:612..800 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig62815.14047.1mRNA_H-paniculata_contig62815.14047.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig62815 612..802 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig62815.14047.1 ID=prot_H-paniculata_contig62815.14047.1|Name=mRNA_H-paniculata_contig62815.14047.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=63bp
FLDVGWLAKVLEPVLNHKGVEQRGASHMFGDAELTEPWHSHSLRRLTDDG
ILEQRLAQFLWPR
back to top