prot_H-paniculata_contig6281.14046.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6281.14046.1
Unique Nameprot_H-paniculata_contig6281.14046.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length98
Homology
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BLAST of mRNA_H-paniculata_contig6281.14046.1 vs. uniprot
Match: R1CIT9_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CIT9_EMIHU)

HSP 1 Score: 92.0 bits (227), Expect = 3.130e-22
Identity = 46/86 (53.49%), Postives = 56/86 (65.12%), Query Frame = 0 
Query:    6 PKGWSVVCNESVCVKGKYKPYNGRTAHERLAQAAGMPDPIVGASIKPDGKVELRSESVNNSNFGVCDASGTYAGETVRAQIEAGKV 91
            PK  +VVC+   CV G YKP    TAHERLA+AAGM  P V  SIKPDG+V LRSES+N +N   CDA+GT  G+    ++  G V
Sbjct:    3 PKSGTVVCDGEKCVIGNYKPTKDGTAHERLAKAAGMDKPKVAGSIKPDGRVALRSESINRTNGLGCDAAGTKLGQWAEMKMALGDV 88
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6281.14046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R1CIT9_EMIHU3.130e-2253.49Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6281contigH-paniculata_contig6281:6613..6906 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6281.14046.1mRNA_H-paniculata_contig6281.14046.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6281 6613..6906 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6281.14046.1 ID=prot_H-paniculata_contig6281.14046.1|Name=mRNA_H-paniculata_contig6281.14046.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=98bp
MSSARPKGWSVVCNESVCVKGKYKPYNGRTAHERLAQAAGMPDPIVGASI
KPDGKVELRSESVNNSNFGVCDASGTYAGETVRAQIEAGKVSCLRVV*
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