prot_H-paniculata_contig6280.14044.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6280.14044.1
Unique Nameprot_H-paniculata_contig6280.14044.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length481
Homology
BLAST of mRNA_H-paniculata_contig6280.14044.1 vs. uniprot
Match: A0A6H5L5E6_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E6_9PHAE)

HSP 1 Score: 496 bits (1276), Expect = 1.080e-162
Identity = 302/494 (61.13%), Postives = 362/494 (73.28%), Query Frame = 0
Query:    7 QNSVGRHDAQERLEHFLGNPLRPSKQDLLDQGIYLDATPQELKMSHYLAARNVKHGLEGRETVQDLKNQGVYLSCGSNRAAHEKLLVKALLRRKLKHAFSQEELAQXXXXXXXXXXXXXXXXXXXXXXTSQLARLVSRRPHPDQLEREHPELLEAGILALVFEERVMPRFRGES-----------TGAEGGGGGSEQDGGPEHVVSFDALMTWPDVKDHMA-KGGLEEEEATAEMAQHFRLCDADSDGFLTFSQFLRWVELCDLNPEDHVQ---VFDRELETEFSLLIG-EGDSGVSLDAAASCRFVKRWVTSASLGREELEIMWG-----EGDAAEGKKNLEGFKKFCRQCETRSSAAHNVRLEDLQNCANIAEAKAKQALKSKLAARLSARPDLEELKKTRIYRLGGLDPATELLERNLIANDLKQQLLARPALEDLEKRGIKPNSARKASAARRDRSSSLLAAALDSTMRHDDAKWRMDPSTLGAGPRAEV 479
            Q+ + R   ++RL   L NPLRPSK+DL++ GIY+DATP+EL+M HYLA RN+KHGLE RE++QDLK+ GVY +  S  AAHEKLL+KALL+RKL HAFS+E    XXXXXXXXXXXXXXXXXXXXXXT QLARLVS+RP P QLE+EHPEL++AG LALVFEERVMPR    S            G + G   +E +GGPEH+VSFD L+TWPDV+DH+A +GG   E+   EMA+HF LCD+D DG++TFSQFLRWVELCDL+P+DH+Q   V D  L+ E++ L G  G  G++LD A S   VKRW  SASL R+ LE MWG      G A E  K L+GFK FCR CE RSSAAH +R ++L   A   EAKAK+ L++K+AA+LSARPDL++LK++RIYR GGLDPA   LERNLIA  LK+QLLARPA+EDLEKRGIKP    K    R D +SS L  ALDSTMRHDDA WR  PS L AG R EV
Sbjct:  484 QHGLERQLIEQRLSRSLRNPLRPSKKDLVEHGIYIDATPRELQMEHYLATRNLKHGLERRESIQDLKDHGVYQAENSLSAAHEKLLIKALLQRKLSHAFSREXXXXXXXXXXXXXXXXXXXXXXXXXXTRQLARLVSKRPDPAQLEQEHPELMKAGTLALVFEERVMPRAAAGSXXXXXXXTVAEAGEKEGEVVAESEGGPEHLVSFDGLLTWPDVQDHLAGEGG---EDTKHEMARHFDLCDSDGDGYITFSQFLRWVELCDLDPDDHLQAGDVTDSNLDAEYARLEGASGKGGITLDQALSYPLVKRWAASASLDRDALEAMWGIGASEGGSAEENTKQLDGFKSFCRHCEARSSAAHQMRHKELLADAAKKEAKAKEDLRAKMAAKLSARPDLDKLKESRIYRSGGLDPAVVHLERNLIAISLKEQLLARPAIEDLEKRGIKPKDGTKV---RLDHNSSKLREALDSTMRHDDAVWRSHPSELVAGSRQEV 971          
BLAST of mRNA_H-paniculata_contig6280.14044.1 vs. uniprot
Match: D8LIW6_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIW6_ECTSI)

HSP 1 Score: 502 bits (1292), Expect = 8.420e-161
Identity = 305/491 (62.12%), Postives = 365/491 (74.34%), Query Frame = 0
Query:    7 QNSVGRHDAQERLEHFLGNPLRPSKQDLLDQGIYLDATPQELKMSHYLAARNVKHGLEGRETVQDLKNQGVYLSCGSNRAAHEKLLVKALLRRKLKHAFSQEELAQXXXXXXXXXXXXXXXXXXXXXXTSQLARLVSRRPHPDQLEREHPELLEAGILALVFEERVMPRFRGES-----------TGAEGGGGGSEQDGGPEHVVSFDALMTWPDVKDHMA-KGGLEEEEATAEMAQHFRLCDADSDGFLTFSQFLRWVELCDLNPEDHVQVFDRELETEFSLLIG-EGDSGVSLDAAASCRFVKRWVTSASLGREELEIMWG----EGDAAEGK-KNLEGFKKFCRQCETRSSAAHNVRLEDLQNCANIAEAKAKQALKSKLAARLSARPDLEELKKTRIYRLGGLDPATELLERNLIANDLKQQLLARPALEDLEKRGIKPNSARKASAARRDRSSSLLAAALDSTMRHDDAKWRMDPSTLGAGPRAEV 479
            Q+ + R   ++RL   L NPLRPSK+DL++ GIY+DATP+EL+M HYLA RN+KHGLE RE++QDLK+ GVY    S RAAHEKLL+KALL+RKL HAFS+EE+ +XXXXXXXXXXXXXXXXXXXXXXT QLARLVS+RP P QLE+EHPEL++AG LALVFEERVMPR    S            G + G   +E  GGPEH+VSFD L+TWPDV+DH+  +GG   E+   EMA+HF LCD+D DG++TFSQFLRWVELCDL+P+DH+QV D  L+ E++ L G  G  GV+LD A S   VKRWV SASL R+ L  MWG    EG +AEG  K L+GFK FCR CE RSSAAH +R ++L   A   EAKAK+ L++ +AA+LSARPDL++LK++RIYR GGLDPA   LERNLIA  LK+QLLARPA+EDLEKRGIKP    K    R D +SS L  ALDSTMRHDDA WR  PS L AG R EV
Sbjct:  941 QHGLERQLIEKRLSRSLRNPLRPSKKDLVEHGIYIDATPRELQMEHYLATRNLKHGLERRESIQDLKDHGVYQPENSLRAAHEKLLIKALLQRKLSHAFSREEMDRXXXXXXXXXXXXXXXXXXXXXXTRQLARLVSKRPDPAQLEQEHPELMKAGTLALVFEERVMPRAAAGSXXXXXXXXXXEAGEKEGEVVAESGGGPEHLVSFDGLLTWPDVQDHLVGEGG---EDTKHEMARHFDLCDSDGDGYITFSQFLRWVELCDLDPDDHLQVTDSNLDAEYARLEGASGKWGVTLDQALSYPLVKRWVASASLDRDALNAMWGMGAGEGGSAEGNTKQLDGFKSFCRHCEARSSAAHQMRHKELLADAAKKEAKAKEDLRATMAAKLSARPDLDKLKESRIYRSGGLDPAMVHLERNLIAISLKEQLLARPAIEDLEKRGIKPKDGTKV---RLDHNSSKLREALDSTMRHDDAIWRSHPSELAAGSRQEV 1425          
BLAST of mRNA_H-paniculata_contig6280.14044.1 vs. uniprot
Match: A0A835YKI0_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKI0_9STRA)

HSP 1 Score: 195 bits (495), Expect = 3.060e-50
Identity = 170/513 (33.14%), Postives = 240/513 (46.78%), Query Frame = 0
Query:   59 VKHGLEGRETVQDLKNQGVYLSCGSNRAAHEKLLVKALLRRKLKHAFSQEELAQXXXXXXXXXXXXXXXXXXXXXXTSQLARLVSRRPHPDQLEREHPELL--------------EAGILALVFEERVMPRFRGESTGAEGGGGGSEQDGGPEHVVSFDALMTWPDVKDHMAKGGLEEEE----------------------------ATAEMAQH--FRLCDA----------------DSDGFLTFSQFLRWVELCDLNPEDHVQVFDRELETEFSLLI-----GEGDSGVSLDAAASCRF------------------------VKRWVTSASLGREELEIMWGEG---DAAEGKKNLEGFKKFCRQCETRSSAAHNVRLEDLQNCANIAEAKAKQALKSKLAARLSARPDLEELKKTRIYRLGGLDPATELLERNLIANDLKQQLLARPALEDLEKRGIKPNSARKASAARRDRSSSLLAAALDSTMRHDDAKWRMDPSTLGAGPRAEV 479
            VK GL  R  ++DL+ QG+YL   + +AAHE+LL  AL+ R L   F+      XXXXXXXX               +QL+RL+  RP  + L+ EHP +L              EA  LAL F++R+       S  A+               +SF+AL  WP +++ + +  L   E                            AT +  +   F  CDA                D+DG +TFS+FLR+VELCD+NPE H++  D  L   F  L      GEG  G  +  A +C +                        V+RW  SA+L R+ L  ++G     DAA   ++  GF  FCR C+T ++ AH  R++ +++ A+     A+  L+  L  +L ARPD  EL +  I    G  PA  LLERNLIAN +KQQLLARPAL++L ++GI   S    +AA+   +++ L   L  +MR DDA WR  P+ LGAG R  V
Sbjct: 1351 VKRGLLNRPDLEDLRAQGIYLDTTATQAAHERLLKGALIARGLSKHFNXXXXXXXXXXXXXXEQGGSRLRAEHSIIAAQLSRLMRARPDVEALQEEHPHILXXXXXXXXXXXXXXEANELALAFQDRLS------SPDAQ--------------TLSFEALRDWPALREALKEADLMHPEXXXXXXXMGSFDSCVTRLLAPRSRTLARATRKCYREGSFDACDAPVRACAPXXXXXXXXADADGAITFSEFLRFVELCDINPEAHIEADDDALAAAFQRLSTAAEGGEGGGGSRVSLAVACEYKRLSVAVDXXXXXXXXXXXXXXXLVQRWAASAALDRKALTELFGNAAGADAASPVQDQAGFVAFCRACQTAAAEAHAYRVQRMRSAASAEGEAARDTLRQTLVKKLQARPDYRELCERHIVL--GAAPAAALLERNLIANSIKQQLLARPALDELVRQGILLPSD---TAAQHADAAAQLEQRL--SMRKDDALWRARPAELGAGHRHAV 1836          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6280.14044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L5E6_9PHAE1.080e-16261.13EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LIW6_ECTSI8.420e-16162.12EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YKI0_9STRA3.060e-5033.14EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 110..144
NoneNo IPR availableCOILSCoilCoilcoord: 349..369
NoneNo IPR availableGENE3D1.10.238.10coord: 202..362
e-value: 8.3E-6
score: 27.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 224..259
score: 10.775
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 206..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6280contigH-paniculata_contig6280:2298..12393 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6280.14044.1mRNA_H-paniculata_contig6280.14044.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6280 2298..12393 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6280.14044.1 ID=prot_H-paniculata_contig6280.14044.1|Name=mRNA_H-paniculata_contig6280.14044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=481bp
QGTIQDQNSVGRHDAQERLEHFLGNPLRPSKQDLLDQGIYLDATPQELKM
SHYLAARNVKHGLEGRETVQDLKNQGVYLSCGSNRAAHEKLLVKALLRRK
LKHAFSQEELAQLKQKGIYKEAEHERLEEERALVTSQLARLVSRRPHPDQ
LEREHPELLEAGILALVFEERVMPRFRGESTGAEGGGGGSEQDGGPEHVV
SFDALMTWPDVKDHMAKGGLEEEEATAEMAQHFRLCDADSDGFLTFSQFL
RWVELCDLNPEDHVQVFDRELETEFSLLIGEGDSGVSLDAAASCRFVKRW
VTSASLGREELEIMWGEGDAAEGKKNLEGFKKFCRQCETRSSAAHNVRLE
DLQNCANIAEAKAKQALKSKLAARLSARPDLEELKKTRIYRLGGLDPATE
LLERNLIANDLKQQLLARPALEDLEKRGIKPNSARKASAARRDRSSSLLA
AALDSTMRHDDAKWRMDPSTLGAGPRAEVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair