prot_H-paniculata_contig6261.14021.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6261.14021.1
Unique Nameprot_H-paniculata_contig6261.14021.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length174
Homology
BLAST of mRNA_H-paniculata_contig6261.14021.1 vs. uniprot
Match: A0A6H5KFT3_9PHAE (PUA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFT3_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 4.890e-24
Identity = 60/101 (59.41%), Postives = 69/101 (68.32%), Query Frame = 0
Query:   45 QRATLHYAVRRRALIYSAVAHGIEVSGEAGDCVQEDSALPPFEPKKVVIAKGKARLFWDGNPLVYGGAVLRVEGKPAAGEVVDVVDSSGKFIAWGKTLPDS 145
            QRAT    V R   + S+VA G+   G    C ++ S       K VV+A+GKARLFWDGNPLVYGGAV RVEG PAAG+VVDV+DSSGKFIAWG   PDS
Sbjct:   37 QRATAAVRVCRPTAL-SSVAGGVAEPGTTVACSRKLS-------KAVVVARGKARLFWDGNPLVYGGAVSRVEGDPAAGDVVDVIDSSGKFIAWGVYNPDS 129          
BLAST of mRNA_H-paniculata_contig6261.14021.1 vs. uniprot
Match: D7FS18_ECTSI (PUA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS18_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 2.720e-23
Identity = 60/102 (58.82%), Postives = 69/102 (67.65%), Query Frame = 0
Query:   44 RQRATLHYAVRRRALIYSAVAHGIEVSGEAGDCVQEDSALPPFEPKKVVIAKGKARLFWDGNPLVYGGAVLRVEGKPAAGEVVDVVDSSGKFIAWGKTLPDS 145
            R  A +H   R RAL  S+VA  +   G    C ++ S       K VV+A+GKARLFWDGNPLVYGGAV RVEG PAAG+VVDV+DSSGKFIAWG   PDS
Sbjct:   38 RATAAVHVC-RPRAL--SSVAGAVAEPGTTVACSRKLS-------KAVVVARGKARLFWDGNPLVYGGAVSRVEGDPAAGDVVDVIDSSGKFIAWGVYNPDS 129          
BLAST of mRNA_H-paniculata_contig6261.14021.1 vs. uniprot
Match: A0A8J2SGB3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGB3_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.660e-11
Identity = 34/57 (59.65%), Postives = 39/57 (68.42%), Query Frame = 0
Query:   89 KKVVIAKGKARLFWDGNPLVYGGAVLRVEGKPAAGEVVDVVDSSGKFIAWGKTLPDS 145
            K V I +GKARLF DGNPLVYGGAV R  G  + G+ V+VVD +G  I WG   PDS
Sbjct:   32 KSVTIKRGKARLFRDGNPLVYGGAVERTSGDVSRGDAVEVVDGAGNNIGWGFYNPDS 88          
BLAST of mRNA_H-paniculata_contig6261.14021.1 vs. uniprot
Match: A0A836CPI8_9STRA (Ribosomal RNA large subunit methyltransferase I-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPI8_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.180e-10
Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 0
Query:   91 VVIAKGKARLFWDGNPLVYGGAVLRVEGKPAAGEVVDVVDSSGKFIAWG 139
            V IAKGKARLF+DGNPLV+GGAV  V G+PA  +VV+V    GK I WG
Sbjct:   26 VTIAKGKARLFYDGNPLVFGGAVAAVTGRPAQCDVVEVKSDVGKLIGWG 74          
BLAST of mRNA_H-paniculata_contig6261.14021.1 vs. uniprot
Match: A0A7X7L9M1_9BACT (Class I SAM-dependent rRNA methyltransferase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7X7L9M1_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 7.130e-10
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0
Query:   90 KVVIAKGKARLFWDGNPLVYGGAVLRVEGKPAAGEVVDVVDSSGKFIAWGKTLPDS 145
            +V I KGKA+ FW G+PLV+ GA+ +V+G P AGE VDV+D +G  I WG   P S
Sbjct:    9 RVSIRKGKAKPFWYGHPLVFSGAIQKVDGSPEAGECVDVLDQNGNRIGWGVFNPHS 64          
BLAST of mRNA_H-paniculata_contig6261.14021.1 vs. uniprot
Match: A0A6P5GU83_ANACO (uncharacterized protein LOC109724890 isoform X1 n=5 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GU83_ANACO)

HSP 1 Score: 62.8 bits (151), Expect = 2.330e-8
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 0
Query:   90 KVVIAKGKARLFWDGNPLVYGGAVLRVEGKPA--AGEVVDVVDSSGKFIAWG 139
            KVV+ KGKA++F DGNP+VY GAV R+ G+P    G+VV V D SGK I WG
Sbjct:  109 KVVLKKGKAQIFRDGNPMVYSGAVDRIIGRPPPRTGDVVLVADGSGKPIGWG 160          
BLAST of mRNA_H-paniculata_contig6261.14021.1 vs. uniprot
Match: A0A061RB59_9CHLO (Rna binding protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RB59_9CHLO)

HSP 1 Score: 60.1 bits (144), Expect = 1.970e-7
Identity = 36/77 (46.75%), Postives = 46/77 (59.74%), Query Frame = 0
Query:   91 VVIAKGKARLFWDGNPLVYGGAVLRVEGKPA--AGEVVDVVDSSGKFIAWGKTLPDSCRFVLR-----SELRQSCFC 160
            VV+ KGKARLF +G P+VY GA+ RV G+PA  AG+ V V D +    AWG   P+S  F +R      E R+S  C
Sbjct:   89 VVLKKGKARLFKEGQPIVYQGAIDRVVGRPAPVAGDCVMVSDGAQSVFAWGVINPESSVFRVRLMQFEEEARRSPGC 165          
BLAST of mRNA_H-paniculata_contig6261.14021.1 vs. uniprot
Match: K8FI44_9CHLO (Putative methyltransferase n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8FI44_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 2.720e-7
Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = 0
Query:   91 VVIAKGKARLFWDGNPLVYGGAVLRVEGKPAAGEVVDVVDSSGKFIAWGKTLPDSCRFVLR 151
            V +A GKA +F DGNP+VYGGA+ R+E  P  G+VV V D + + I WG T   S  F +R
Sbjct:  119 VQLASGKANIFMDGNPIVYGGAIDRMENDPKDGQVVGVFDHNQRPIGWG-TFNSSSMFRVR 178          
BLAST of mRNA_H-paniculata_contig6261.14021.1 vs. uniprot
Match: A0A7V6E8D7_9DELT (Class I SAM-dependent rRNA methyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V6E8D7_9DELT)

HSP 1 Score: 58.5 bits (140), Expect = 6.220e-7
Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   91 VVIAKGKARLFWDGNPLVYGGAVLRVEGKPAAGEVVDVVDSSGKFIAWG 139
            V I +GKAR FW GNPLVY GA+ +++G PA G +V+V    GK I +G
Sbjct:    6 VFIKRGKARPFWFGNPLVYSGAIEKIDGSPAGGGLVEVRSYEGKTIGFG 54          
BLAST of mRNA_H-paniculata_contig6261.14021.1 vs. uniprot
Match: UPI000FDEDA54 (23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI n=1 Tax=Serratia microhaemolytica TaxID=2675110 RepID=UPI000FDEDA54)

HSP 1 Score: 58.2 bits (139), Expect = 8.410e-7
Identity = 25/56 (44.64%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   90 KVVIAKGKARLFWDGNPLVYGGAVLRVEGKPAAGEVVDVVDSSGKFIAWGKTLPDS 145
            ++++ KG+ +     +P ++ GAVLRVEGKP AGE +D+ DS GK++A G   P S
Sbjct:    4 RLLLTKGREKSLLRRHPWIFSGAVLRVEGKPLAGETIDICDSQGKWLARGAYSPQS 59          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6261.14021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFT3_9PHAE4.890e-2459.41PUA domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FS18_ECTSI2.720e-2358.82PUA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8J2SGB3_9STRA4.660e-1159.65Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A836CPI8_9STRA1.180e-1065.31Ribosomal RNA large subunit methyltransferase I-li... [more]
A0A7X7L9M1_9BACT7.130e-1053.57Class I SAM-dependent rRNA methyltransferase n=1 T... [more]
A0A6P5GU83_ANACO2.330e-859.62uncharacterized protein LOC109724890 isoform X1 n=... [more]
A0A061RB59_9CHLO1.970e-746.75Rna binding protein n=1 Tax=Tetraselmis sp. GSL018... [more]
K8FI44_9CHLO2.720e-749.18Putative methyltransferase n=1 Tax=Bathycoccus pra... [more]
A0A7V6E8D7_9DELT6.220e-753.06Class I SAM-dependent rRNA methyltransferase n=1 T... [more]
UPI000FDEDA548.410e-744.6423S rRNA (cytosine(1962)-C(5))-methyltransferase R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002478PUA domainSMARTSM00359pua_5coord: 89..158
e-value: 5.7E-7
score: 39.2
IPR002478PUA domainPROSITEPS50890PUAcoord: 88..167
score: 9.197
IPR041532RlmI, PUA-like domainPFAMPF17785PUA_3coord: 91..139
e-value: 1.4E-10
score: 40.8
IPR036974PUA domain superfamilyGENE3D2.30.130.10coord: 89..152
e-value: 2.6E-14
score: 54.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..173
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..19
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 90..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6261contigH-paniculata_contig6261:11487..12409 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6261.14021.1mRNA_H-paniculata_contig6261.14021.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6261 11417..12549 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6261.14021.1 ID=prot_H-paniculata_contig6261.14021.1|Name=mRNA_H-paniculata_contig6261.14021.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=174bp
MLFAASLSMAERPSCGAIAFVPSRSWLPRAPHSLALVDSDHVSRQRATLH
YAVRRRALIYSAVAHGIEVSGEAGDCVQEDSALPPFEPKKVVIAKGKARL
FWDGNPLVYGGAVLRVEGKPAAGEVVDVVDSSGKFIAWGKTLPDSCRFVL
RSELRQSCFCNTLLLAYDCTALV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002478PUA
IPR041532RlmI_PUA-like
IPR036974PUA_sf
IPR015947PUA-like_sf