prot_H-paniculata_contig626.14019.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig626.14019.1
Unique Nameprot_H-paniculata_contig626.14019.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length125
Homology
BLAST of mRNA_H-paniculata_contig626.14019.1 vs. uniprot
Match: D7FPR2_ECTSI (NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPR2_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 2.330e-56
Identity = 89/124 (71.77%), Postives = 107/124 (86.29%), Query Frame = 0
Query:    1 MATGVGNFLMKSVPPSRRKGALSPAANLYRAITKEVPRILTIYDIDMDYNEARAVIAEYFRSNSHIEDRRVVDSLVMKGYMELEETTLQYKQKTHLLKLLDPVTVNKSRAVKDNFVDKFMAGTS 124
            MA+G+GN++MKSV PSR  G  SPA  LYRAI KEVPRILTIYD+DMD+ +ARA IA YFR+N H++D RVVD+LVMKGYM+LEETT+QYKQKTHLL+LL+P   N +RAVKD+F+DKFMAGTS
Sbjct:    1 MASGLGNYMMKSVGPSRT-GTASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKDDFMDKFMAGTS 123          
BLAST of mRNA_H-paniculata_contig626.14019.1 vs. uniprot
Match: A0A7S2XV13_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV13_9STRA)

HSP 1 Score: 113 bits (282), Expect = 6.080e-30
Identity = 53/108 (49.07%), Postives = 74/108 (68.52%), Query Frame = 0
Query:   16 SRRKGALSPAANLYRAITKEVPRILTIYDIDMDYNEARAVIAEYFRSNSHIEDRRVVDSLVMKGYMELEETTLQYKQKTHLLKLLDPVTVNKSRAVKDNFVDKFMAGT 123
            S+   A +P   LYR I KE+PR++ IYD+DM   EA A IA +FR ++H++D RV+D LV KGYM +EE T+QYKQKTHL+ +LDP  +++     + F +KF  GT
Sbjct:   11 SKMPTAQNPVLQLYRKILKELPRVMIIYDVDMPKEEANAAIAYHFRKSAHVKDERVIDLLVAKGYMHVEEATMQYKQKTHLMSILDPWELSEKFKEPETFEEKFYKGT 118          
BLAST of mRNA_H-paniculata_contig626.14019.1 vs. uniprot
Match: A0A4D9D5Z3_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Z3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.060e-26
Identity = 55/109 (50.46%), Postives = 74/109 (67.89%), Query Frame = 0
Query:   17 RRKGALSPAANLYRAITKEVPRILTIYDIDMDYNEARAVIAEYFRSNSHIEDRRVVDSLVMKGYMELEETTLQYKQKTHLLKLL--DPVTVNKSRAVKDNFVDKFMAGT 123
            + K   +P   LYR I+KE+PR+LTIYD D+   EARA +   FR N+H++D  +VD LV KGYMELEET +Q+KQKTHLL+LL  D     K R  K+ F +KF++ +
Sbjct:   12 KEKTPRNPVVQLYRTISKELPRVLTIYDADLAPAEARAQVQVLFRKNAHLQDPVIVDMLVKKGYMELEETLMQWKQKTHLLRLLAADTEAPRKYRE-KNTFTEKFLSNS 119          
BLAST of mRNA_H-paniculata_contig626.14019.1 vs. uniprot
Match: A0A067CET6_SAPPC (Complex1_LYR_dom domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CET6_SAPPC)

HSP 1 Score: 102 bits (255), Expect = 7.770e-26
Identity = 54/105 (51.43%), Postives = 72/105 (68.57%), Query Frame = 0
Query:   23 SPAANLYRAITKEVPRILTIYDIDMDYNEARAVIAEYFRSNSHIEDRRVVDSLVMKGYMELEETTLQYKQKTHLLKLLDPVTV--NKSRAVKDNF---VDKFMAG 122
            +PA  LYR ITK+VPR+LT+YDI+M+  EAR  +  +FR N+ I+D RV+D L+ K  MELEET +Q+KQK+HLL LLD      N+   V D+F   +D F AG
Sbjct:    8 NPAVTLYRHITKQVPRVLTLYDINMEPREARLAVQAFFRKNAEIKDPRVIDMLISKANMELEETLMQWKQKSHLLTLLDSGVKLQNEKNVVYDDFEEGLDNFFAG 112          
BLAST of mRNA_H-paniculata_contig626.14019.1 vs. uniprot
Match: A0A835YPN0_9STRA (NADH dehydrogenase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPN0_9STRA)

HSP 1 Score: 100 bits (248), Expect = 4.930e-25
Identity = 50/100 (50.00%), Postives = 70/100 (70.00%), Query Frame = 0
Query:    1 MATGVGNFLMKSVPPSRRKGALSPAANLYRAITKEVPRILTIYDIDMDYNEARAVIAEYFRSNSHIEDRRVVDSLVMKGYMELEETTLQYKQKTHLLKLL 100
            +A G+ N + KS       G+ +P  +LYR+I +E+PR+LTIYD+DMD   AR  + E FR N H++D  V+  +V KGYMELEET LQ+KQ+THL++LL
Sbjct:    1 VAQGLRNAIFKS-GGGFLGGSTAPIMDLYRSICREIPRVLTIYDVDMDPAVARRKVNELFRKNGHLQDPEVIKIVVSKGYMELEETVLQFKQRTHLMRLL 99          
BLAST of mRNA_H-paniculata_contig626.14019.1 vs. uniprot
Match: A0A1V9YKZ4_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKZ4_9STRA)

HSP 1 Score: 100 bits (250), Expect = 5.260e-25
Identity = 51/100 (51.00%), Postives = 70/100 (70.00%), Query Frame = 0
Query:   23 SPAANLYRAITKEVPRILTIYDIDMDYNEARAVIAEYFRSNSHIEDRRVVDSLVMKGYMELEETTLQYKQKTHLLKLLDPVTVNKSRAVKDNFVDKFMAG 122
            +PA  LYR ITK+VPR+LT+YDI+M+  EAR  +  +FR N+ I+D RV+D L+ K  MELEET +Q+KQK HL+ LLD     K +A KD+  D++  G
Sbjct:   14 NPAVTLYRHITKQVPRVLTLYDINMEPREARLAVQAFFRKNAEIKDPRVIDMLISKANMELEETLMQWKQKAHLVTLLDSGA--KLQAEKDSVFDEYEDG 111          
BLAST of mRNA_H-paniculata_contig626.14019.1 vs. uniprot
Match: A0A6S8YN63_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8YN63_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 3.700e-24
Identity = 49/104 (47.12%), Postives = 72/104 (69.23%), Query Frame = 0
Query:   22 LSPAANLYRAITKEVPRILTIYDIDMDYNEARAVIAEYFRSNSHIEDRRVVDSLVMKGYMELEETTLQYKQKTHLLKL----LDPVTVNKSRAVKDNFVDKFMA 121
            L+P+A LYR+I KE+PR++TIYDID+   EAR  I ++FR N+H++D RVV  L+  GYM+LEET LQ+KQ++HL+++    LDPV   +        +D+  A
Sbjct:   16 LNPSARLYRSIVKELPRVMTIYDIDVPLPEARNSIRDHFRKNAHLKDDRVVSMLIETGYMDLEETLLQHKQRSHLIRVFTGVLDPVGTTRKHLGPGASIDQQFA 119          
BLAST of mRNA_H-paniculata_contig626.14019.1 vs. uniprot
Match: A0A024FTL2_9STRA (Complex1_LYR_dom domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024FTL2_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 4.750e-24
Identity = 55/107 (51.40%), Postives = 71/107 (66.36%), Query Frame = 0
Query:   19 KGALSPAANLYRAITKEVPRILTIYDIDMDYNEARAVIAEYFRSNSHIEDRRVVDSLVMKGYMELEETTLQYKQKTHLLKLLDP---VTVNKSRAVKDNFVDKFMAG 122
            K   SPA  LYR I K+VPR+LT+YDI M+ +EAR  I   FR N++I+D RVVD L+ K  MELEET LQ+KQK HLL LL+    +  +  +  KD F + F+AG
Sbjct:   12 KAKSSPAVTLYRYIIKQVPRVLTLYDITMEPSEARLAIQALFRKNANIKDPRVVDMLITKANMELEETLLQWKQKVHLLTLLETGMQLRASADKVKKDPF-ENFIAG 117          
BLAST of mRNA_H-paniculata_contig626.14019.1 vs. uniprot
Match: A0A024U653_9STRA (Complex1_LYR_dom domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024U653_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 5.860e-24
Identity = 52/112 (46.43%), Postives = 73/112 (65.18%), Query Frame = 0
Query:   16 SRRKGALSPAANLYRAITKEVPRILTIYDIDMDYNEARAVIAEYFRSNSHIEDRRVVDSLVMKGYMELEETTLQYKQKTHLLKLLDPVT--VNKSRAVKDNF---VDKFMAG 122
            + + G  +PA  LYR ITK+VPR+LT+YDI M+ +EAR  +  +FR N+ ++D RVVD L+ K  MELEET +Q+KQK HL  LLD     +N    V D++   ++ F AG
Sbjct:    7 TEKLGGSNPAVTLYRQITKQVPRVLTLYDISMEPSEARLAVQAFFRKNADVKDPRVVDMLITKAGMELEETLMQWKQKAHLETLLDSGVKLMNNKPKVYDDYEEGLENFFAG 118          
BLAST of mRNA_H-paniculata_contig626.14019.1 vs. uniprot
Match: A0A0P1B7E0_PLAHL (NADH:ubiquinone oxidoreductase, NDUFA6/B14 subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7E0_PLAHL)

HSP 1 Score: 98.2 bits (243), Expect = 6.200e-24
Identity = 51/103 (49.51%), Postives = 71/103 (68.93%), Query Frame = 0
Query:   23 SPAANLYRAITKEVPRILTIYDIDMDYNEARAVIAEYFRSNSHIEDRRVVDSLVMKGYMELEETTLQYKQKTHLLKLLDPV-TVNKSRAVK--DNFVDKFMAG 122
            SPA  LYR ITK+VPR+LT+YDI M+ +EAR  +   FR ++ ++D R+VD L+ K  MELEET +Q+KQK HLL LL+   T+ + + V   D  ++KF AG
Sbjct:   17 SPAVTLYRYITKQVPRVLTLYDISMEPSEARLAVQALFREHAEVKDPRIVDMLITKANMELEETLMQWKQKVHLLTLLERAQTLRQPKLVNSVDQSLEKFFAG 119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig626.14019.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPR2_ECTSI2.330e-5671.77NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus... [more]
A0A7S2XV13_9STRA6.080e-3049.07Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D5Z3_9STRA3.060e-2650.46Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A067CET6_SAPPC7.770e-2651.43Complex1_LYR_dom domain-containing protein n=2 Tax... [more]
A0A835YPN0_9STRA4.930e-2550.00NADH dehydrogenase (Fragment) n=1 Tax=Tribonema mi... [more]
A0A1V9YKZ4_9STRA5.260e-2551.00Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A6S8YN63_9STRA3.700e-2447.12Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A024FTL2_9STRA4.750e-2451.40Complex1_LYR_dom domain-containing protein n=2 Tax... [more]
A0A024U653_9STRA5.860e-2446.43Complex1_LYR_dom domain-containing protein n=2 Tax... [more]
A0A0P1B7E0_PLAHL6.200e-2449.51NADH:ubiquinone oxidoreductase, NDUFA6/B14 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016488NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6PANTHERPTHR12964NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNITcoord: 24..122
NoneNo IPR availablePANTHERPTHR12964:SF0NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 6coord: 24..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig626contigH-paniculata_contig626:29242..32147 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig626.14019.1mRNA_H-paniculata_contig626.14019.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig626 29171..32876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig626.14019.1 ID=prot_H-paniculata_contig626.14019.1|Name=mRNA_H-paniculata_contig626.14019.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp
MATGVGNFLMKSVPPSRRKGALSPAANLYRAITKEVPRILTIYDIDMDYN
EARAVIAEYFRSNSHIEDRRVVDSLVMKGYMELEETTLQYKQKTHLLKLL
DPVTVNKSRAVKDNFVDKFMAGTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016488NADH_Ub_cplx-1_asu_su-6