prot_H-paniculata_contig6257.14015.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6257.14015.1
Unique Nameprot_H-paniculata_contig6257.14015.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length498
Homology
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BLAST of mRNA_H-paniculata_contig6257.14015.1 vs. uniprot
Match: A0A6H5L4Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q4_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 2.250e-18
Identity = 53/115 (46.09%), Postives = 74/115 (64.35%), Query Frame = 0 
Query:  319 VAKAVEANDSLGCLLYDGNHLNVDVLAEVEYSMSRAKRSVRALLEQVRHALPNVRLAHHFGESHKTVHSSCRSQLPSRREGGGDALPSVQLAPGQETSVAVAMGRRDNIIGSISV 433
            +A+AVEAN++LG LL   NHL+ D L E++Y+M+R KR VR L+ QV+ ++             K V +  ++++     GG    PSVQLAPGQETS+ V+ GR+DNIIGSI V
Sbjct:    1 MAQAVEANNTLGILLCQDNHLSADTLIEIDYAMARPKRPVRDLVGQVQRSIDTQNFLS------KGVETGQQTKVAGVPHGGE---PSVQLAPGQETSIQVSFGRKDNIIGSIPV 106
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BLAST of mRNA_H-paniculata_contig6257.14015.1 vs. uniprot
Match: A0A4X2LCH0_VOMUR (NACHT domain-containing protein n=6 Tax=Vombatus ursinus TaxID=29139 RepID=A0A4X2LCH0_VOMUR)

HSP 1 Score: 58.5 bits (140), Expect = 2.810e-5
Identity = 50/151 (33.11%), Postives = 74/151 (49.01%), Query Frame = 0 
Query:   12 ENLTTLNLASSDLGVAGVAALAAALRASFSIASVDCSGNSRLGDEGVALLTPALLTDGMGASTIRELNLVRCSVGDPGATALAKALPGNSVLEQLKLSGNFIGDAGAVGIMNSLLGLTKGFLTHLWLGSNRIGSKGAEAMAIALAKSPMLQ 162
            +NL  L L S+ +G  G  +L  AL    SI  V    N  +  EG+  L+  LL        +R++NL  C + D     LA +L     LE++ L+ N +G+ GA  +   L  + +  L  L L  N+IGS GA+ +A  LAK P +Q
Sbjct: 1728 QNLKVLYLCSNQIGTEGTLSLGQALARCQSIEEVSLEEN--IFAEGILPLSKGLLK-------LRKINLTSCKINDQMTKPLASSLVLCHDLEEILLAWNSLGNEGATELARVLPQMNQ--LKKLDLEGNQIGSLGAQLLAKGLAKGPGIQ 1867
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BLAST of mRNA_H-paniculata_contig6257.14015.1 vs. uniprot
Match: UPI00201451D1 (NACHT, LRR and PYD domains-containing protein 12-like isoform X1 n=5 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI00201451D1)

HSP 1 Score: 57.0 bits (136), Expect = 7.740e-5
Identity = 47/137 (34.31%), Postives = 70/137 (51.09%), Query Frame = 0 
Query:   28 GVAALAAALRASFSIASVDCSGNSRLGDEGVALLTPALLTDGMGASTIRELNLVRCSVGDPGATALAKALPGNSVLEQLKLSGNFIGDAGAVGIMNSLLGLTKGFLTHLWLGSNRIGSKGAEAMAIALAKSPMLQEL 164
            G AAL ++LR++  +  +D + N ++GDEG+ LL+  L         + +L L RC++ D G   LA AL  NS L +L LS N IG  G   +++  L      L  L L    I  +G   +A AL  +  L+EL
Sbjct:  753 GCAALTSSLRSNSLLRELDLTWN-KIGDEGLTLLSDGLKDP---HCKLEKLTLCRCNITDEGCAVLASALRSNSHLRELDLSNNIIGGEGLT-LLSDGLKDPHCKLEKLTLCRCNITDEGCAVLASALRSNSHLREL 884
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6257.14015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L4Q4_9PHAE2.250e-1846.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4X2LCH0_VOMUR2.810e-533.11NACHT domain-containing protein n=6 Tax=Vombatus u... [more]
UPI00201451D17.740e-534.31NACHT, LRR and PYD domains-containing protein 12-l... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 186..213
e-value: 0.078
score: 22.1
coord: 100..127
e-value: 0.26
score: 20.3
coord: 298..325
e-value: 4.3
score: 12.7
coord: 130..157
e-value: 2.8
score: 14.0
coord: 11..38
e-value: 0.051
score: 22.7
coord: 242..269
e-value: 4.2
score: 12.8
coord: 158..185
e-value: 5.8
score: 11.7
coord: 72..99
e-value: 0.1
score: 21.7
coord: 214..241
e-value: 0.032
score: 23.4
coord: 270..297
e-value: 0.51
score: 19.2
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 161..352
coord: 5..178
coord: 133..213
NoneNo IPR availablePANTHERPTHR24113:SF5RAN GTPASE-ACTIVATING PROTEINcoord: 161..352
coord: 133..213
coord: 5..178
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 12..356
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 215..236
e-value: 2.1E-4
score: 21.1
coord: 158..179
e-value: 0.0078
score: 16.2
coord: 12..33
e-value: 0.082
score: 13.0
coord: 133..152
e-value: 0.23
score: 11.6
coord: 73..94
e-value: 0.01
score: 15.9
coord: 269..292
e-value: 0.0011
score: 18.8
coord: 100..121
e-value: 0.23
score: 11.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..67
e-value: 7.2E-8
score: 34.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 68..238
e-value: 1.0E-40
score: 141.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 239..369
e-value: 4.0E-21
score: 77.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6257contigH-paniculata_contig6257:516..5726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6257.14015.1mRNA_H-paniculata_contig6257.14015.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6257 516..5726 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6257.14015.1 ID=prot_H-paniculata_contig6257.14015.1|Name=mRNA_H-paniculata_contig6257.14015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=498bp
VQELSREWGKDENLTTLNLASSDLGVAGVAALAAALRASFSIASVDCSGN
SRLGDEGVALLTPALLTDGMGASTIRELNLVRCSVGDPGATALAKALPGN
SVLEQLKLSGNFIGDAGAVGIMNSLLGLTKGFLTHLWLGSNRIGSKGAEA
MAIALAKSPMLQELHLSGNALGNIGVAALVRGAVAGKCLRGLYVGGCGLG
DTGARQVANALAGSLYLETLHLGYNTISDEGGSSLARALAENRALKRLML
PANLLREAGGKAVAGMLISNETLLHLDISGNRLGATGIEAVATAIAKNTT
LLELSLSECGGTDAAFRSVAKAVEANDSLGCLLYDGNHLNVDVLAEVEYS
MSRAKRSVRALLEQVRHALPNVRLAHHFGESHKTVHSSCRSQLPSRREGG
GDALPSVQLAPGQETSVAVAMGRRDNIIGSISVTSETTLEEARGFIDPLL
QIATTFQFVSNIARAVPFEEERARRVVWDCEVPVRLRPESWVPIGRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf