prot_H-paniculata_contig625.14003.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig625.14003.1
Unique Nameprot_H-paniculata_contig625.14003.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length364
Homology
BLAST of mRNA_H-paniculata_contig625.14003.1 vs. uniprot
Match: D8LFA4_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA4_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 8.760e-62
Identity = 132/334 (39.52%), Postives = 191/334 (57.19%), Query Frame = 0
Query:   21 GVMEKASLEVKIDI--STPQGPALYEATYTRGGWIWRTSHRFREWLALKDSLKKDYGTRNLPDESTFPRKEDMGAMVNRLLHSCQGCQESGTKPFNILEERRQGLEAYFSTVLDQHREVWDGSDAVKCFFFPGPPTSYSKALARRRSIEINEEKIKTRVAPSTGLNITSSFKSLKFSMFESSSPSPMRPASGSFSGSLSAEQGTAAVGAAATTPKTQLPPPVTLQSKAAPT------------------TASSMMSMISSKMPSLRDVLFNDSPRSSKSSSRHGAPSNSGAGGGSSHGFGWTNGSHHSSTGGFGRPHPLPPSSINKSRSESGAT 334
            G++  ASLEV      +T  GP +Y+  YTRGGWIWRTSHR+ +WL+LK+ L+ D+G RNLPD+  FP+KED+GA++ ++L SCQGC+E G +    LEERR+GL+AYFS VLD+ RE+WD S  +K FF PGPPTSYS AL+RRRS ++ EEK+K + A S    +  S KS   S+FE+S  +    A+ +   S S    + +  A +T+  + +  P   + + + +                  +  + ++ +  +MPSLRD+LF+D+P    + S +G+                 NGS  SS       H   P+S NK  SESG T
Sbjct:   27 GIIGTASLEVLCAAKPNTNTGPTMYDVAYTRGGWIWRTSHRYSDWLSLKERLQADFGKRNLPDDELFPQKEDVGAIIVKVLSSCQGCREGGGRAVGHLEERRRGLQAYFSQVLDEQRELWDSSADIKAFFSPGPPTSYSAALSRRRSEQLKEEKLKAKEASSAASMMACSLKSTLGSLFETSPATTPSAAAAAAKPSFSTYPFSTSSSARSTSVSSSMFSPRRPEDQWSASXXXXXXXXXXXXXXXSSGSVINRLAAMKKQMPSLRDILFDDAPPPPTAGSVNGS----------------VNGSRASSR------HNKIPASTNKPPSESGVT 338          
BLAST of mRNA_H-paniculata_contig625.14003.1 vs. uniprot
Match: A0A6H5KH88_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH88_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 2.380e-61
Identity = 133/320 (41.56%), Postives = 186/320 (58.13%), Query Frame = 0
Query:   34 ISTPQGPALYEATYTRGGWIWRTSHRFREWLALKDSLKKDYGTRNLPDESTFPRKEDMGAMVNRLLHSCQGCQESGTKPFNILEERRQGLEAYFSTVLDQHREVWDGSDAVKCFFFPGPPTSYSKALARRRSIEINEEKIKTRVAPSTGLNITSSFKSLKFSMFESS-SPSPMRPASGS--------FSGSLSAEQGTAAVGA----------AATTPKTQLPPPVTLQSKAAPTTASSMMSMISSKMPSLRDVLFNDSPRSSKSSSRHGAPSNSGAGGGSSHGFGWTNGSHHSSTGGFGRPHPLPPSSINKSRSESGAT 334
            ++T  GP +YEA YTRGGWIWRTSHR+ +WL+LK+ L+ D+G RNLPD+  FP+KED+GA++ ++L SCQGC+E G++    +EERR+GL+AYFS VLD+ RE+WD S  ++ FF PGPPTSYS AL+RRRS ++ EEK+K + A S              S+FE+S + +P   A+G+        FS S SA   +A+             +A+       P V    +++ +  S + +M   +MPSLRD+LF+D+P      S +G+                 NGS  SS       H   PSS NK  SESGAT
Sbjct:   49 LATSAGPTMYEAVYTRGGWIWRTSHRYSDWLSLKERLRADFGKRNLPDDELFPQKEDVGAIIGKVLSSCQGCREGGSRAVGHIEERRRGLQAYFSQVLDEQRELWDSSADIEAFFSPGPPTSYSAALSRRRSEQLKEEKLKAKEASSXXXXXXXXXXXXXGSLFETSPATTPSAAAAGAKPSFSTYPFSASSSARSTSASSSMFSPRLPEDQWSASASXXXXXPGVGAGGRSSGSVISRLAAM-KKQMPSLRDLLFDDAPPPPTPGSVNGS----------------INGSRASSR------HNKIPSSTNKPPSESGAT 345          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig625.14003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFA4_ECTSI8.760e-6239.52PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KH88_9PHAE2.380e-6141.56PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainPFAMPF00787PXcoord: 42..147
e-value: 4.5E-6
score: 26.6
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 23..151
e-value: 2.2E-9
score: 39.0
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 39..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig625contigH-paniculata_contig625:10809..17482 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig625.14003.1mRNA_H-paniculata_contig625.14003.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig625 10616..17823 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig625.14003.1 ID=prot_H-paniculata_contig625.14003.1|Name=mRNA_H-paniculata_contig625.14003.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=364bp
MNPTEGAASSAPTAGASGEAGVMEKASLEVKIDISTPQGPALYEATYTRG
GWIWRTSHRFREWLALKDSLKKDYGTRNLPDESTFPRKEDMGAMVNRLLH
SCQGCQESGTKPFNILEERRQGLEAYFSTVLDQHREVWDGSDAVKCFFFP
GPPTSYSKALARRRSIEINEEKIKTRVAPSTGLNITSSFKSLKFSMFESS
SPSPMRPASGSFSGSLSAEQGTAAVGAAATTPKTQLPPPVTLQSKAAPTT
ASSMMSMISSKMPSLRDVLFNDSPRSSKSSSRHGAPSNSGAGGGSSHGFG
WTNGSHHSSTGGFGRPHPLPPSSINKSRSESGATVSLNMSCLPRKFREVM
LECVCWLSSLTIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
IPR036871PX_dom_sf