prot_H-paniculata_contig62104.13952.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig62104.13952.1
Unique Nameprot_H-paniculata_contig62104.13952.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length126
Homology
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BLAST of mRNA_H-paniculata_contig62104.13952.1 vs. uniprot
Match: UPI00063AEE8E (uncharacterized protein LOC105793376 n=1 Tax=Gossypium raimondii TaxID=29730 RepID=UPI00063AEE8E)

HSP 1 Score: 50.4 bits (119), Expect = 9.880e-5
Identity = 32/96 (33.33%), Postives = 50/96 (52.08%), Query Frame = 0 
Query:    3 SSKSRIHWIIDSGCNGHHLIPQRDLFQIFRQVVRSPIASAGKGELNVEGQGDVEGLIWTAEGAVRIIFCDVFYVPEASDSILSVERMVSQGMEAYF 98
            SSK    W+IDSGC  HH+     +F+       S +   G GEL ++ +G  + +I T  G   I  C+V YVP+   ++LSV +++ +G    F
Sbjct:  150 SSKVNKIWLIDSGCT-HHIASDESMFKELDTSFESKVG-IGNGEL-LKARGKGKAVICTKLGIKTI--CEVLYVPDIDQNLLSVGQLLEKGYSLLF 240
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig62104.13952.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00063AEE8E9.880e-533.33uncharacterized protein LOC105793376 n=1 Tax=Gossy... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig62104contigH-paniculata_contig62104:6..383 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig62104.13952.1mRNA_H-paniculata_contig62104.13952.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig62104 6..383 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig62104.13952.1 ID=prot_H-paniculata_contig62104.13952.1|Name=mRNA_H-paniculata_contig62104.13952.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp
MESSKSRIHWIIDSGCNGHHLIPQRDLFQIFRQVVRSPIASAGKGELNVE
GQGDVEGLIWTAEGAVRIIFCDVFYVPEASDSILSVERMVSQGMEAYFGS
ERRRLYYNGITIPFEHTSRKEYSLRM
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