prot_H-paniculata_contig61471.13856.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig61471.13856.1
Unique Nameprot_H-paniculata_contig61471.13856.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length68
Homology
[Close]
BLAST of mRNA_H-paniculata_contig61471.13856.1 vs. uniprot
Match: D7G511_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G511_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 1.600e-5
Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 0 
Query:    1 MLLGSFIRRR---------CNIAWTLPGANVSWRRVQSSYGALSQTPSALPDVCHLPVMTISWDAMRALDKAYIE 66
            MLL    RRR          ++  ++ G++ S R  Q++  + S+  S LPDVC LPV+T SW A+++LD AY E
Sbjct:    1 MLLSGVARRRFAAPGALRAASVRRSVLGSSNSTRGCQAAPRSASRLASTLPDVCGLPVVTTSWQAIKSLDDAYTE 75
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig61471.13856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G511_ECTSI1.600e-538.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig61471contigH-paniculata_contig61471:78..281 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig61471.13856.1mRNA_H-paniculata_contig61471.13856.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig61471 78..302 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig61471.13856.1 ID=prot_H-paniculata_contig61471.13856.1|Name=mRNA_H-paniculata_contig61471.13856.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
MLLGSFIRRRCNIAWTLPGANVSWRRVQSSYGALSQTPSALPDVCHLPVM
TISWDAMRALDKAYIEVS
back to top