prot_H-paniculata_contig6102.13806.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6102.13806.1
Unique Nameprot_H-paniculata_contig6102.13806.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length127
Homology
BLAST of mRNA_H-paniculata_contig6102.13806.1 vs. uniprot
Match: D8LHQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ4_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 4.510e-63
Identity = 98/125 (78.40%), Postives = 107/125 (85.60%), Query Frame = 0
Query:    1 SALLGTGIGAAGVVGMSLAGFPDVVAAATPSWVGPTKLVLDPLLLYFEFAFVARIVLSWYPALDLNRAPQNLVAWPTEPLLKPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLISNK 125
            S + G   GAA V   +L GFP + AA  P+WVGPTKLVLDP LLYFEFAFVARIVLSWYP LDLN APQNLVAWPTEP+LKPTRA++PPAFGVDISPIVWVMICS +HEILLGQQGILNL+SNK
Sbjct:  105 STVSGLATGAAVVALAALGGFPGLAAAEAPAWVGPTKLVLDPTLLYFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILKPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK 229          
BLAST of mRNA_H-paniculata_contig6102.13806.1 vs. uniprot
Match: A0A6H5L5E9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E9_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 3.310e-61
Identity = 94/121 (77.69%), Postives = 104/121 (85.95%), Query Frame = 0
Query:    5 GTGIGAAGVVGMSLAGFPDVVAAATPSWVGPTKLVLDPLLLYFEFAFVARIVLSWYPALDLNRAPQNLVAWPTEPLLKPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLISNK 125
            G   GA  V   +L GFP + AA  P+WVGPTKLVLDP LL+FEFAFVARIVLSWYP LDLN APQNLVAWPTEP+L+PTRA++PPAFGVDISPIVWVMICS +HEILLGQQGILNL+SNK
Sbjct:  101 GLATGATVVALAALGGFPGLAAAEAPAWVGPTKLVLDPTLLFFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK 221          
BLAST of mRNA_H-paniculata_contig6102.13806.1 vs. uniprot
Match: A0A836CA21_9STRA (YGGT family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA21_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.780e-49
Identity = 76/99 (76.77%), Postives = 84/99 (84.85%), Query Frame = 0
Query:   27 AATPSWVGPTKLVLDPLLLYFEFAFVARIVLSWYPALDLNRAPQNLVAWPTEPLLKPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLISNK 125
            A  P WVGPT+  LDP LLY EFAF+ RIVLSWYP  DLN+APQNLVAWPTEP+LKPTRAVVPPAFGVDISPIVWVMI SF+ EIL GQQGI N++S +
Sbjct:   91 ADVPGWVGPTRAALDPFLLYMEFAFLCRIVLSWYPQTDLNKAPQNLVAWPTEPILKPTRAVVPPAFGVDISPIVWVMILSFVREILFGQQGIFNMLSQQ 189          
BLAST of mRNA_H-paniculata_contig6102.13806.1 vs. uniprot
Match: A0A7S3UWL9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL9_HETAK)

HSP 1 Score: 142 bits (359), Expect = 8.500e-41
Identity = 67/102 (65.69%), Postives = 79/102 (77.45%), Query Frame = 0
Query:   22 PDVVAAATPSWVGPTKLVLDPLLLYFEFAFVARIVLSWYPALDLNRAPQNLVAWPTEPLLKPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLIS 123
            P V +A  P+WV PT  VL P L  F  A +ARIVLSWYP++DLN AP NLVAWPTEPLL  TR VVPPAFGVDISPIVW+M+ SF++E+ LG QGIL L++
Sbjct:   73 PTVASAEVPAWVEPTSTVLGPFLAVFSLAMLARIVLSWYPSIDLNEAPFNLVAWPTEPLLAFTRGVVPPAFGVDISPIVWLMVASFVNEVALGPQGILTLLA 174          
BLAST of mRNA_H-paniculata_contig6102.13806.1 vs. uniprot
Match: A0A7S2V560_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V560_9STRA)

HSP 1 Score: 140 bits (352), Expect = 8.440e-40
Identity = 64/104 (61.54%), Postives = 81/104 (77.88%), Query Frame = 0
Query:   22 PDVVAAATPSWVGPTKLVLDPLLLYFEFAFVARIVLSWYPALDLNRAPQNLVAWPTEPLLKPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLISNK 125
            P+   AA P WV PTKL+LDPLL     A +AR+VLSWYP++ L++AP + +  PTEP+L+ TR VVPPAFGVD+SPIVW+MI SF HEILLGQQG+L ++ NK
Sbjct:   73 PESAFAAAPVWVAPTKLILDPLLNIVSLAMLARVVLSWYPSISLDKAPFSYLKAPTEPVLQVTREVVPPAFGVDVSPIVWIMISSFFHEILLGQQGLLTILQNK 176          
BLAST of mRNA_H-paniculata_contig6102.13806.1 vs. uniprot
Match: A0A7S2GHS6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHS6_9STRA)

HSP 1 Score: 132 bits (332), Expect = 7.600e-37
Identity = 54/101 (53.47%), Postives = 74/101 (73.27%), Query Frame = 0
Query:   22 PDVVAAATPSWVGPTKLVLDPLLLYFEFAFVARIVLSWYPALDLNRAPQNLVAWPTEPLLKPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLI 122
            PD+  A   +W GPT+ + DPLLL  +   + R+++SWYP ++LN+ P N++ WPTEP L+PTR V+PPAFGVDISPIVW+ I SF  EI  GQQG+ N++
Sbjct:   70 PDLAIAYDNAWAGPTRAICDPLLLVGQTVMLFRVIISWYPEINLNKLPYNIITWPTEPFLRPTRKVIPPAFGVDISPIVWIAILSFFREIFFGQQGVFNML 170          
BLAST of mRNA_H-paniculata_contig6102.13806.1 vs. uniprot
Match: A0A7S3W2L2_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W2L2_9SPIT)

HSP 1 Score: 131 bits (330), Expect = 1.870e-36
Identity = 62/102 (60.78%), Postives = 72/102 (70.59%), Query Frame = 0
Query:   25 VAAATPSWVGPTKLVLDPLLLYFEFAFVARIVLSWYPALDLNRAPQNLVAWPTEPLLKPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLISNKG 126
            V A+  SWVGPTKLVL PL   F   F+ R +LSW+P  DLN  P N+ AWPTEP+LK TR V+PP  GVDI+PIVWV I SF  EILLG QG+L +I  KG
Sbjct:   73 VGASDVSWVGPTKLVLGPLFTIFTLLFLFRTILSWFPKYDLNAFPYNIAAWPTEPILKGTRKVIPPVAGVDITPIVWVAIISFFSEILLGPQGLLTIIQRKG 174          
BLAST of mRNA_H-paniculata_contig6102.13806.1 vs. uniprot
Match: A0A7S1FZ37_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FZ37_9STRA)

HSP 1 Score: 131 bits (329), Expect = 2.100e-36
Identity = 63/98 (64.29%), Postives = 75/98 (76.53%), Query Frame = 0
Query:   24 VVAAATPSWVGPTKLVLDPLLLYFEFAFVARIVLSWYPALDLNRAPQNLVAWPTEPLLKPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNL 121
            V+ A T  WV P + VLDPLL    FA + RIV+SWYP  +L+  P +L  WPTEPLL+PTRAVVPPAFGVDISP+VW+ I +FLHEILLGQQG+L L
Sbjct:   66 VMLAETDPWVVPLQSVLDPLLNLLSFAMLCRIVISWYPNTNLSTLPYSLAVWPTEPLLRPTRAVVPPAFGVDISPMVWLGIFTFLHEILLGQQGLLTL 163          
BLAST of mRNA_H-paniculata_contig6102.13806.1 vs. uniprot
Match: A0A7S2PCB6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCB6_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.970e-35
Identity = 59/99 (59.60%), Postives = 72/99 (72.73%), Query Frame = 0
Query:   23 DVVAAATPSWVGPTKLVLDPLLLYFEFAFVARIVLSWYPALDLNRAPQNLVAWPTEPLLKPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNL 121
             +  A T +WV P K VLDP L    FA + R+V+SWYP  ++N  P N+V WPTEPLL+ TR VVPPAFGVDISPIVW+ + +FLHEI LGQQG+L L
Sbjct:   70 SLTVAETEAWVEPLKNVLDPSLNLLSFAMLCRVVISWYPETNVNEVPYNIVVWPTEPLLRVTRGVVPPAFGVDISPIVWLGVFTFLHEIFLGQQGLLTL 168          
BLAST of mRNA_H-paniculata_contig6102.13806.1 vs. uniprot
Match: W7TNB9_9STRA (Integral membrane protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNB9_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.490e-35
Identity = 61/102 (59.80%), Postives = 72/102 (70.59%), Query Frame = 0
Query:   24 VVAAATPSWVGPTKLVLDPLLLYFEFAFVARIVLSWYPALDLNRAPQNLVAWPTEPLLKPTRAVVPPAFGVDISPIVWVMICSFLHEILLGQQGILNLISNK 125
            V+  A  SWV P K V++PLL     AF+ RIVLSWYP +DLN+ P NL+AWPTEP L  TR VVPPAFGVDISPI+W    +FL EIL+  QGIL L+  K
Sbjct:   69 VLLLAASSWVSPAKAVIEPLLDLGGVAFLVRIVLSWYPQVDLNKLPANLIAWPTEPFLSVTRLVVPPAFGVDISPIIWFAFLNFLREILVSDQGILTLLQQK 170          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6102.13806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHQ4_ECTSI4.510e-6378.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5E9_9PHAE3.310e-6177.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CA21_9STRA1.780e-4976.77YGGT family-domain-containing protein n=1 Tax=Trib... [more]
A0A7S3UWL9_HETAK8.500e-4165.69Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V560_9STRA8.440e-4061.54Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2GHS6_9STRA7.600e-3753.47Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3W2L2_9SPIT1.870e-3660.78Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S1FZ37_9STRA2.100e-3664.29Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2PCB6_9STRA1.970e-3559.60Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
W7TNB9_9STRA2.490e-3559.80Integral membrane protein n=2 Tax=Nannochloropsis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003425CCB3/YggTPFAMPF02325YGGTcoord: 44..111
e-value: 1.5E-14
score: 54.2
IPR003425CCB3/YggTPANTHERPTHR33219FAMILY NOT NAMEDcoord: 39..125
NoneNo IPR availablePANTHERPTHR33219:SF11PROTEIN COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, CHLOROPLASTICcoord: 39..125
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..126
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 44..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6102contigH-paniculata_contig6102:217..5654 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6102.13806.1mRNA_H-paniculata_contig6102.13806.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6102 217..5654 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6102.13806.1 ID=prot_H-paniculata_contig6102.13806.1|Name=mRNA_H-paniculata_contig6102.13806.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp
SALLGTGIGAAGVVGMSLAGFPDVVAAATPSWVGPTKLVLDPLLLYFEFA
FVARIVLSWYPALDLNRAPQNLVAWPTEPLLKPTRAVVPPAFGVDISPIV
WVMICSFLHEILLGQQGILNLISNKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003425CCB3/YggT